Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_pT_A18
(779 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X71129-1|CAA50441.1| 255|Homo sapiens electron transfer flavopr... 300 4e-81
CR456827-1|CAG33108.1| 255|Homo sapiens ETFB protein. 300 4e-81
BC093963-1|AAH93963.1| 255|Homo sapiens electron-transfer-flavo... 300 4e-81
BC093961-1|AAH93961.1| 255|Homo sapiens electron-transfer-flavo... 300 4e-81
AF436663-1|AAN03713.1| 255|Homo sapiens electron transfer flavo... 300 4e-81
X76067-1|CAB37832.1| 53|Homo sapiens electron transfer flavopr... 75 2e-13
BC066939-1|AAH66939.1| 463|Homo sapiens immunity-related GTPase... 36 0.12
AC005622-1|AAC34467.1| 463|Homo sapiens R30953_1 protein. 36 0.12
X87241-1|CAA60685.1| 4590|Homo sapiens homologue of Drosophila F... 35 0.29
BC003533-1|AAH03533.1| 420|Homo sapiens kringle containing tran... 33 0.87
AK223422-1|BAD97142.1| 420|Homo sapiens kringle-containing tran... 33 0.87
AK075033-1|BAC11365.1| 381|Homo sapiens protein ( Homo sapiens ... 33 0.87
AK027669-1|BAB55281.1| 420|Homo sapiens protein ( Homo sapiens ... 33 0.87
AB086356-1|BAC00824.1| 420|Homo sapiens kringle-containing prot... 33 0.87
BC007861-1|AAH07861.1| 199|Homo sapiens KIAA1450 protein protein. 31 3.5
AK022968-1|BAB14338.1| 440|Homo sapiens protein ( Homo sapiens ... 31 3.5
AB040883-1|BAA95974.1| 1139|Homo sapiens KIAA1450 protein protein. 31 3.5
BC043386-1|AAH43386.1| 577|Homo sapiens LOC374920 protein protein. 31 6.1
AB018551-1|BAA76711.1| 438|Homo sapiens coiled-coil protein pro... 31 6.1
AL050037-1|CAB43247.1| 323|Homo sapiens hypothetical protein pr... 30 8.1
AF231022-1|AAF61928.1| 4349|Homo sapiens protocadherin Fat 2 pro... 30 8.1
>X71129-1|CAA50441.1| 255|Homo sapiens electron transfer
flavoprotein beta subunit protein.
Length = 255
Score = 300 bits (736), Expect = 4e-81
Identities = 147/227 (64%), Positives = 172/227 (75%)
Frame = -1
Query: 779 VVTDGVKHSMNPFDEIAVEEAVRMKXXKLASEVIAVSCGPSQAQETLRTALAMGADRAIH 600
VVTDGVKHSMNPF EIAVEEAVR+K KL EVIAVSCGP+Q QET+RTALAMGADR IH
Sbjct: 29 VVTDGVKHSMNPFCEIAVEEAVRLKEKKLVKEVIAVSCGPAQCQETIRTALAMGADRGIH 88
Query: 599 VEVAGAEYDTLQPIHVAKILAKLSQDEKADLVIVGKQAIDDDSNQTAQMTAALLDWPQGT 420
VEV AE + L P+ VA++LAKL++ EK DLV++GKQAIDDD NQT QMTA LDWPQGT
Sbjct: 89 VEVPPAEAERLGPLQVARVLAKLAEKEKVDLVLLGKQAIDDDCNQTGQMTAGFLDWPQGT 148
Query: 419 FASKIEKTDGALTITREIDGGLEVIKTKIPAVLSADLRLNEPRYATLPNIMXXXXXXXXX 240
FAS++ L + REIDGGLE ++ K+PAV++ADLRLNEPRYATLPNIM
Sbjct: 149 FASQVTLEGDKLKVEREIDGGLETLRLKLPAVVTADLRLNEPRYATLPNIMKAKKKKIEV 208
Query: 239 XXXKDLGVDLAPRIKVVSVEDPPVRQAGSIIPDVDTLVAKLKEGGHV 99
DLGVDL ++ V+SVEDPP R AG + + LVAKLKE G +
Sbjct: 209 IKPGDLGVDLTSKLSVISVEDPPQRTAGVKVETTEDLVAKLKEIGRI 255
>CR456827-1|CAG33108.1| 255|Homo sapiens ETFB protein.
Length = 255
Score = 300 bits (736), Expect = 4e-81
Identities = 147/227 (64%), Positives = 172/227 (75%)
Frame = -1
Query: 779 VVTDGVKHSMNPFDEIAVEEAVRMKXXKLASEVIAVSCGPSQAQETLRTALAMGADRAIH 600
VVTDGVKHSMNPF EIAVEEAVR+K KL EVIAVSCGP+Q QET+RTALAMGADR IH
Sbjct: 29 VVTDGVKHSMNPFCEIAVEEAVRLKEKKLVKEVIAVSCGPAQCQETIRTALAMGADRGIH 88
Query: 599 VEVAGAEYDTLQPIHVAKILAKLSQDEKADLVIVGKQAIDDDSNQTAQMTAALLDWPQGT 420
VEV AE + L P+ VA++LAKL++ EK DLV++GKQAIDDD NQT QMTA LDWPQGT
Sbjct: 89 VEVPPAEAERLGPLQVARVLAKLAEKEKVDLVLLGKQAIDDDCNQTGQMTAGFLDWPQGT 148
Query: 419 FASKIEKTDGALTITREIDGGLEVIKTKIPAVLSADLRLNEPRYATLPNIMXXXXXXXXX 240
FAS++ L + REIDGGLE ++ K+PAV++ADLRLNEPRYATLPNIM
Sbjct: 149 FASQVTLEGDKLKVEREIDGGLETLRLKLPAVVTADLRLNEPRYATLPNIMKAKKKKIEV 208
Query: 239 XXXKDLGVDLAPRIKVVSVEDPPVRQAGSIIPDVDTLVAKLKEGGHV 99
DLGVDL ++ V+SVEDPP R AG + + LVAKLKE G +
Sbjct: 209 IKPGDLGVDLTSKLSVISVEDPPQRTAGVKVETTEDLVAKLKEIGRI 255
>BC093963-1|AAH93963.1| 255|Homo sapiens
electron-transfer-flavoprotein, beta polypeptide,
isoform 1 protein.
Length = 255
Score = 300 bits (736), Expect = 4e-81
Identities = 147/227 (64%), Positives = 172/227 (75%)
Frame = -1
Query: 779 VVTDGVKHSMNPFDEIAVEEAVRMKXXKLASEVIAVSCGPSQAQETLRTALAMGADRAIH 600
VVTDGVKHSMNPF EIAVEEAVR+K KL EVIAVSCGP+Q QET+RTALAMGADR IH
Sbjct: 29 VVTDGVKHSMNPFCEIAVEEAVRLKEKKLVKEVIAVSCGPAQCQETIRTALAMGADRGIH 88
Query: 599 VEVAGAEYDTLQPIHVAKILAKLSQDEKADLVIVGKQAIDDDSNQTAQMTAALLDWPQGT 420
VEV AE + L P+ VA++LAKL++ EK DLV++GKQAIDDD NQT QMTA LDWPQGT
Sbjct: 89 VEVPPAEAERLGPLQVARVLAKLAEKEKVDLVLLGKQAIDDDCNQTGQMTAGFLDWPQGT 148
Query: 419 FASKIEKTDGALTITREIDGGLEVIKTKIPAVLSADLRLNEPRYATLPNIMXXXXXXXXX 240
FAS++ L + REIDGGLE ++ K+PAV++ADLRLNEPRYATLPNIM
Sbjct: 149 FASQVTLEGDKLKVEREIDGGLETLRLKLPAVVTADLRLNEPRYATLPNIMKAKKKKIEV 208
Query: 239 XXXKDLGVDLAPRIKVVSVEDPPVRQAGSIIPDVDTLVAKLKEGGHV 99
DLGVDL ++ V+SVEDPP R AG + + LVAKLKE G +
Sbjct: 209 IKPGDLGVDLTSKLSVISVEDPPQRTAGVKVETTEDLVAKLKEIGRI 255
>BC093961-1|AAH93961.1| 255|Homo sapiens
electron-transfer-flavoprotein, beta polypeptide
protein.
Length = 255
Score = 300 bits (736), Expect = 4e-81
Identities = 147/227 (64%), Positives = 172/227 (75%)
Frame = -1
Query: 779 VVTDGVKHSMNPFDEIAVEEAVRMKXXKLASEVIAVSCGPSQAQETLRTALAMGADRAIH 600
VVTDGVKHSMNPF EIAVEEAVR+K KL EVIAVSCGP+Q QET+RTALAMGADR IH
Sbjct: 29 VVTDGVKHSMNPFCEIAVEEAVRLKEKKLVKEVIAVSCGPAQCQETIRTALAMGADRGIH 88
Query: 599 VEVAGAEYDTLQPIHVAKILAKLSQDEKADLVIVGKQAIDDDSNQTAQMTAALLDWPQGT 420
VEV AE + L P+ VA++LAKL++ EK DLV++GKQAIDDD NQT QMTA LDWPQGT
Sbjct: 89 VEVPPAEAERLGPLQVARVLAKLAEKEKVDLVLLGKQAIDDDCNQTGQMTAGFLDWPQGT 148
Query: 419 FASKIEKTDGALTITREIDGGLEVIKTKIPAVLSADLRLNEPRYATLPNIMXXXXXXXXX 240
FAS++ L + REIDGGLE ++ K+PAV++ADLRLNEPRYATLPNIM
Sbjct: 149 FASQVTLEGDKLKVEREIDGGLETLRLKLPAVVTADLRLNEPRYATLPNIMKAKKKKIEV 208
Query: 239 XXXKDLGVDLAPRIKVVSVEDPPVRQAGSIIPDVDTLVAKLKEGGHV 99
DLGVDL ++ V+SVEDPP R AG + + LVAKLKE G +
Sbjct: 209 IKPGDLGVDLTSKLSVISVEDPPQRTAGVKVETTEDLVAKLKEIGRI 255
>AF436663-1|AAN03713.1| 255|Homo sapiens electron transfer
flavoprotein beta-subunit protein.
Length = 255
Score = 300 bits (736), Expect = 4e-81
Identities = 147/227 (64%), Positives = 172/227 (75%)
Frame = -1
Query: 779 VVTDGVKHSMNPFDEIAVEEAVRMKXXKLASEVIAVSCGPSQAQETLRTALAMGADRAIH 600
VVTDGVKHSMNPF EIAVEEAVR+K KL EVIAVSCGP+Q QET+RTALAMGADR IH
Sbjct: 29 VVTDGVKHSMNPFCEIAVEEAVRLKEKKLVKEVIAVSCGPAQCQETIRTALAMGADRGIH 88
Query: 599 VEVAGAEYDTLQPIHVAKILAKLSQDEKADLVIVGKQAIDDDSNQTAQMTAALLDWPQGT 420
VEV AE + L P+ VA++LAKL++ EK DLV++GKQAIDDD NQT QMTA LDWPQGT
Sbjct: 89 VEVPPAEAERLGPLQVARVLAKLAEKEKVDLVLLGKQAIDDDCNQTGQMTAGFLDWPQGT 148
Query: 419 FASKIEKTDGALTITREIDGGLEVIKTKIPAVLSADLRLNEPRYATLPNIMXXXXXXXXX 240
FAS++ L + REIDGGLE ++ K+PAV++ADLRLNEPRYATLPNIM
Sbjct: 149 FASQVTLEGDKLKVEREIDGGLETLRLKLPAVVTADLRLNEPRYATLPNIMKAKKKKIEV 208
Query: 239 XXXKDLGVDLAPRIKVVSVEDPPVRQAGSIIPDVDTLVAKLKEGGHV 99
DLGVDL ++ V+SVEDPP R AG + + LVAKLKE G +
Sbjct: 209 IKPGDLGVDLTSKLSVISVEDPPQRTAGVKVETTEDLVAKLKEIGRI 255
>X76067-1|CAB37832.1| 53|Homo sapiens electron transfer
flavoprotein beta subunit protein.
Length = 53
Score = 75.4 bits (177), Expect = 2e-13
Identities = 34/53 (64%), Positives = 42/53 (79%)
Frame = -1
Query: 425 GTFASKIEKTDGALTITREIDGGLEVIKTKIPAVLSADLRLNEPRYATLPNIM 267
GTFAS++ L + REIDGGLE ++ K+PAV++ADLRLNEPRYATLPN M
Sbjct: 1 GTFASQVTLEGDKLKVEREIDGGLETLRLKLPAVVTADLRLNEPRYATLPNSM 53
>BC066939-1|AAH66939.1| 463|Homo sapiens immunity-related GTPase
family, cinema protein.
Length = 463
Score = 36.3 bits (80), Expect = 0.12
Identities = 32/115 (27%), Positives = 50/115 (43%), Gaps = 4/115 (3%)
Frame = -1
Query: 650 QETLRTALAMGADRAIHVEVAGAEYDTLQPIHVAKILAK---LSQDEKADLV-IVGKQAI 483
++ L+TAL +G +A+ V A YD IH + + L D A L VGKQA
Sbjct: 265 EQVLKTALVLGVIQALPVPGLAAAYDDALLIHSLRGYHRSFGLDDDSLAKLAEQVGKQA- 323
Query: 482 DDDSNQTAQMTAALLDWPQGTFASKIEKTDGALTITREIDGGLEVIKTKIPAVLS 318
D + A P+ + +DGA+ + R + G+ V T + +S
Sbjct: 324 -GDLRSVIRSPLANEVSPETVLRLYSQSSDGAMRVARAFERGIPVFGTLVAGGIS 377
>AC005622-1|AAC34467.1| 463|Homo sapiens R30953_1 protein.
Length = 463
Score = 36.3 bits (80), Expect = 0.12
Identities = 32/115 (27%), Positives = 50/115 (43%), Gaps = 4/115 (3%)
Frame = -1
Query: 650 QETLRTALAMGADRAIHVEVAGAEYDTLQPIHVAKILAK---LSQDEKADLV-IVGKQAI 483
++ L+TAL +G +A+ V A YD IH + + L D A L VGKQA
Sbjct: 265 EQVLKTALVLGVIQALPVPGLAAAYDDALLIHSLRGYHRSFGLDDDSLAKLAEQVGKQA- 323
Query: 482 DDDSNQTAQMTAALLDWPQGTFASKIEKTDGALTITREIDGGLEVIKTKIPAVLS 318
D + A P+ + +DGA+ + R + G+ V T + +S
Sbjct: 324 -GDLRSVIRSPLANEVSPETVLRLYSQSSDGAMRVARAFERGIPVFGTLVAGGIS 377
>X87241-1|CAA60685.1| 4590|Homo sapiens homologue of Drosophila Fat
protein protein.
Length = 4590
Score = 35.1 bits (77), Expect = 0.29
Identities = 19/58 (32%), Positives = 33/58 (56%)
Frame = -1
Query: 536 KLSQDEKADLVIVGKQAIDDDSNQTAQMTAALLDWPQGTFASKIEKTDGALTITREID 363
K+ +D VI+ +A D D Q+ Q+ +LLD +G F ++K GA+ I +++D
Sbjct: 935 KVREDLPEGTVIMWLEAHDPDLGQSGQVRYSLLDHGEGNF--DVDKLSGAVRIVQQLD 990
>BC003533-1|AAH03533.1| 420|Homo sapiens kringle containing
transmembrane protein 2 protein.
Length = 420
Score = 33.5 bits (73), Expect = 0.87
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -3
Query: 243 KSKCQRPWGGPGTSYQGGLCGRSSSPTGW 157
+ K R WG PG + GLCG ++SP GW
Sbjct: 373 REKGPRRWGLPGAPGEAGLCG-TNSPEGW 400
>AK223422-1|BAD97142.1| 420|Homo sapiens kringle-containing
transmembrane protein 2 isoform b precursor variant
protein.
Length = 420
Score = 33.5 bits (73), Expect = 0.87
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -3
Query: 243 KSKCQRPWGGPGTSYQGGLCGRSSSPTGW 157
+ K R WG PG + GLCG ++SP GW
Sbjct: 373 REKGPRRWGLPGAPGEAGLCG-TNSPEGW 400
>AK075033-1|BAC11365.1| 381|Homo sapiens protein ( Homo sapiens
cDNA FLJ90552 fis, clone OVARC1000811, highly similar to
Kringle-containing transmembrane protein 2 isoform b
precursor. ).
Length = 381
Score = 33.5 bits (73), Expect = 0.87
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -3
Query: 243 KSKCQRPWGGPGTSYQGGLCGRSSSPTGW 157
+ K R WG PG + GLCG ++SP GW
Sbjct: 334 REKGPRRWGLPGAPGEAGLCG-TNSPEGW 361
>AK027669-1|BAB55281.1| 420|Homo sapiens protein ( Homo sapiens
cDNA FLJ14763 fis, clone NT2RP3003621. ).
Length = 420
Score = 33.5 bits (73), Expect = 0.87
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -3
Query: 243 KSKCQRPWGGPGTSYQGGLCGRSSSPTGW 157
+ K R WG PG + GLCG ++SP GW
Sbjct: 373 REKGPRRWGLPGAPGEAGLCG-TNSPEGW 400
>AB086356-1|BAC00824.1| 420|Homo sapiens kringle-containing protein
protein.
Length = 420
Score = 33.5 bits (73), Expect = 0.87
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -3
Query: 243 KSKCQRPWGGPGTSYQGGLCGRSSSPTGW 157
+ K R WG PG + GLCG ++SP GW
Sbjct: 373 REKGPRRWGLPGAPGEAGLCG-TNSPEGW 400
>BC007861-1|AAH07861.1| 199|Homo sapiens KIAA1450 protein protein.
Length = 199
Score = 31.5 bits (68), Expect = 3.5
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Frame = +1
Query: 274 LGSVAY-RGSFSRRSALSTAGIFVLITSKP---PSISRVIVRAPSVFSIFDANVPCGQSN 441
LG+ ++ G R +T G++V P P R + R P + + AN+PCG N
Sbjct: 35 LGTASHGAGGTGGRRLEATRGLYVKAAEGPVLEPVAPRCVQRGPGL--VAGANIPCGDDN 92
Query: 442 KAA 450
K A
Sbjct: 93 KKA 95
>AK022968-1|BAB14338.1| 440|Homo sapiens protein ( Homo sapiens
cDNA FLJ12906 fis, clone NT2RP2004373. ).
Length = 440
Score = 31.5 bits (68), Expect = 3.5
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Frame = +1
Query: 274 LGSVAY-RGSFSRRSALSTAGIFVLITSKP---PSISRVIVRAPSVFSIFDANVPCGQSN 441
LG+ ++ G R +T G++V P P R + R P + + AN+PCG N
Sbjct: 145 LGTASHGAGGTGGRRLEATRGLYVKAAEGPVLEPVAPRCVQRGPGL--VAGANIPCGDDN 202
Query: 442 KAA 450
K A
Sbjct: 203 KKA 205
>AB040883-1|BAA95974.1| 1139|Homo sapiens KIAA1450 protein protein.
Length = 1139
Score = 31.5 bits (68), Expect = 3.5
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Frame = +1
Query: 274 LGSVAY-RGSFSRRSALSTAGIFVLITSKP---PSISRVIVRAPSVFSIFDANVPCGQSN 441
LG+ ++ G R +T G++V P P R + R P + + AN+PCG N
Sbjct: 844 LGTASHGAGGTGGRRLEATRGLYVKAAEGPVLEPVAPRCVQRGPGL--VAGANIPCGDDN 901
Query: 442 KAA 450
K A
Sbjct: 902 KKA 904
>BC043386-1|AAH43386.1| 577|Homo sapiens LOC374920 protein protein.
Length = 577
Score = 30.7 bits (66), Expect = 6.1
Identities = 25/104 (24%), Positives = 44/104 (42%), Gaps = 2/104 (1%)
Frame = -1
Query: 683 VIAVSCGPSQAQETLRTALAMGAD-RAIHVEVAGAEYDTLQPIHVAKILAKLSQDEKADL 507
++A +C P + + AD R + G ++ L +HV + L + + K L
Sbjct: 90 LLANACLPVRTTNKISKQFVAPADVRRLLSYCKGRDHGVLDALHVLEGLFRTDPEAKVKL 149
Query: 506 VIVGKQAIDDDSNQTAQMTAALL-DWPQGTFASKIEKTDGALTI 378
V V QA+ + T ALL +P+ ++ GAL +
Sbjct: 150 VFVEDQAVVETVFFLTSRTRALLRRFPRMLLVDRLPGLQGALDL 193
>AB018551-1|BAA76711.1| 438|Homo sapiens coiled-coil protein
protein.
Length = 438
Score = 30.7 bits (66), Expect = 6.1
Identities = 30/138 (21%), Positives = 60/138 (43%), Gaps = 6/138 (4%)
Frame = -1
Query: 761 KHSMNPFDEIAVEEAVRMKXXKLASEVIAVSCGPSQAQETLRTALAMGADRAIHVEVAGA 582
K + P +E +++ + K A E PSQA + L++ ++ +A A
Sbjct: 174 KKELTPLEEASLQN----QKLKAAYEARMARLDPSQAMQKTSLTLSLQRQMMENLVIAKA 229
Query: 581 EYDTLQPIHVAKILAKLSQDEKADLVIVGKQAIDDDSNQTAQMTAALL------DWPQGT 420
+TLQ + +L E A+ K A+ + + + AA+L DWP+
Sbjct: 230 REETLQRKMEER---RLRLQEAANRRFCSKFALTPEEREQRALYAAILEYEQDHDWPK-H 285
Query: 419 FASKIEKTDGALTITREI 366
+ +K+++ G L++ +
Sbjct: 286 WKAKLKRNPGDLSLVTSL 303
>AL050037-1|CAB43247.1| 323|Homo sapiens hypothetical protein
protein.
Length = 323
Score = 30.3 bits (65), Expect = 8.1
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = -3
Query: 267 ESKEEASQKSKCQRPWGGPGTSYQGGLCGRSSSP 166
E + +A+Q K + GG G+S CGR SSP
Sbjct: 104 ELRNKATQPMKVKFTHGGTGSSQTAPTCGRESSP 137
>AF231022-1|AAF61928.1| 4349|Homo sapiens protocadherin Fat 2 protein.
Length = 4349
Score = 30.3 bits (65), Expect = 8.1
Identities = 17/58 (29%), Positives = 28/58 (48%)
Frame = -1
Query: 536 KLSQDEKADLVIVGKQAIDDDSNQTAQMTAALLDWPQGTFASKIEKTDGALTITREID 363
K+ +D V+ A D D ++ L+D GTF +++ GAL + RE+D
Sbjct: 933 KVPEDLPPGTVLTFLDASDPDLGPAGEVRYVLMDGAHGTF--RVDLMTGALILERELD 988
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,643,844
Number of Sequences: 237096
Number of extensions: 2374662
Number of successful extensions: 5077
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 4806
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5077
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9478778060
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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