Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_pT_A18
         (779 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF106583-2|AAD03129.2|  255|Caenorhabditis elegans Hypothetical ...   271   4e-73
Z27078-2|CAA81588.3|  788|Caenorhabditis elegans Hypothetical pr...    30   1.6  
Z27078-1|CAA81587.2|  628|Caenorhabditis elegans Hypothetical pr...    30   1.6  
AF025472-5|AAB71076.1|  423|Caenorhabditis elegans Hypothetical ...    29   3.7  
AF040652-5|AAB95022.2|  378|Caenorhabditis elegans Hypothetical ...    29   4.9  
AF025450-9|AAB70938.2|  409|Caenorhabditis elegans C-type lectin...    29   4.9  
Z27078-8|CAH04706.2| 1446|Caenorhabditis elegans Hypothetical pr...    28   6.5  

>AF106583-2|AAD03129.2|  255|Caenorhabditis elegans Hypothetical
           protein F23C8.5 protein.
          Length = 255

 Score =  271 bits (664), Expect = 4e-73
 Identities = 135/228 (59%), Positives = 166/228 (72%), Gaps = 1/228 (0%)
 Frame = -1

Query: 779 VVTDGVKHSMNPFDEIAVEEAVRMKXXKLASEVIAVSCGPSQAQETLRTALAMGADRAIH 600
           VVT+GV+HSMNPFDEIA+EEAV++K  KLA+EV+A S G  ++ E LRTALA GAD+A+H
Sbjct: 26  VVTEGVQHSMNPFDEIALEEAVKLKEKKLATEVVAFSLGGPKSAEVLRTALAKGADKAVH 85

Query: 599 VEVAGAEYDTLQPIHVAKILAKLSQDEKADLVIVGKQAIDDDSNQTAQMTAALLDWPQGT 420
           V+V  AE   L+  HVAK L K+ + EK D V +GKQAIDDDS+QTA + A LL+WPQ  
Sbjct: 86  VQVTDAEAGKLESFHVAKALQKIVEQEKFDAVFLGKQAIDDDSSQTAPILAGLLEWPQAL 145

Query: 419 FASKIEKTD-GALTITREIDGGLEVIKTKIPAVLSADLRLNEPRYATLPNIMXXXXXXXX 243
           +ASK+E    G + +TREIDGGL+ IK K+P VLSADLRLNEPRYATLPNIM        
Sbjct: 146 YASKVEDAGAGHMKVTREIDGGLDTIKVKVPFVLSADLRLNEPRYATLPNIMKAKKKPLK 205

Query: 242 XXXXKDLGVDLAPRIKVVSVEDPPVRQAGSIIPDVDTLVAKLKEGGHV 99
               KDL VD+ P+ + + V +PPVRQAG  + DV  LVAKLKE G V
Sbjct: 206 NIPIKDLNVDITPQTETLEVTEPPVRQAGGFVDDVSALVAKLKEKGFV 253


>Z27078-2|CAA81588.3|  788|Caenorhabditis elegans Hypothetical
           protein K04H4.2b protein.
          Length = 788

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = -3

Query: 696 VSKRSHCSLLWTITSTGNSQNCSCDGCRSSYSC*SG 589
           +S++    L+ T +S  NS  CS   C + Y C SG
Sbjct: 163 LSRQQASGLVCTFSSCSNSNPCSVGTCNNGYCCSSG 198


>Z27078-1|CAA81587.2|  628|Caenorhabditis elegans Hypothetical
           protein K04H4.2a protein.
          Length = 628

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = -3

Query: 696 VSKRSHCSLLWTITSTGNSQNCSCDGCRSSYSC*SG 589
           +S++    L+ T +S  NS  CS   C + Y C SG
Sbjct: 163 LSRQQASGLVCTFSSCSNSNPCSVGTCNNGYCCSSG 198


>AF025472-5|AAB71076.1|  423|Caenorhabditis elegans Hypothetical
           protein ZK250.7 protein.
          Length = 423

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 10/40 (25%), Positives = 23/40 (57%)
 Frame = -1

Query: 218 VDLAPRIKVVSVEDPPVRQAGSIIPDVDTLVAKLKEGGHV 99
           +D+  R+K++ V+D P  +   ++      ++ +KEGG +
Sbjct: 254 IDVEVRVKIIEVKDVPCLEKSFVLSHTIKNMSNIKEGGSI 293


>AF040652-5|AAB95022.2|  378|Caenorhabditis elegans Hypothetical
           protein T05A8.5 protein.
          Length = 378

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = +2

Query: 383 LEHHQSFLSLMQMFLVANLIKQQSSVLSGWSHHL 484
           L H+Q+ L+  ++ L   LI+Q S  +SG SH L
Sbjct: 344 LIHYQAKLTAQRVILDVQLIQQHSMAMSGSSHAL 377


>AF025450-9|AAB70938.2|  409|Caenorhabditis elegans C-type lectin
           protein 3 protein.
          Length = 409

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 5/84 (5%)
 Frame = +3

Query: 114 LKLSNESVD-IRYDGASLSDW---RIFHRDHLDTRCQVHPKVF-GTYFFERLLLCFHDVR 278
           ++L+N S+  I  DG +L +    R+FH +   TR +   ++F GT F  +  +   D R
Sbjct: 11  IQLTNASLPPICVDGYTLVNGKCLRLFHEETYHTRAEQTCRIFEGTLFDVKNAI---DNR 67

Query: 279 QCSISWFIQSQISTQYSWDFCLDN 350
             +I+ FI SQ+ T +   FC +N
Sbjct: 68  --AIASFIGSQVETVWMGLFCFNN 89


>Z27078-8|CAH04706.2| 1446|Caenorhabditis elegans Hypothetical
           protein K04H4.2c protein.
          Length = 1446

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = -3

Query: 672 LLWTITSTGNSQNCSCDGCRSSYSC*SG 589
           L+ T +S  NS  CS   C + Y C SG
Sbjct: 685 LVCTFSSCSNSNPCSVGTCNNGYCCSSG 712


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,466,403
Number of Sequences: 27780
Number of extensions: 370609
Number of successful extensions: 1007
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 971
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1006
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1882685842
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)