Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_pT_A13
         (670 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF160933-1|AAD46873.1|  756|Drosophila melanogaster LD14168p pro...    29   5.7  
AE014297-4305|AAN14148.1|  664|Drosophila melanogaster CG1957-PB...    29   5.7  
AE014297-4304|AAF56844.1|  756|Drosophila melanogaster CG1957-PA...    29   5.7  

>AF160933-1|AAD46873.1|  756|Drosophila melanogaster LD14168p
           protein.
          Length = 756

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = +1

Query: 433 ELYSYKF*LIEVHVFFLSETSNATSKMVALKFNATILXRDRA-GVNARHSNA 585
           +LY   F + +  +F L +   A  K+  LK+N T+  +D+  G++    NA
Sbjct: 100 DLYMSHFNMGDFDLFSLDDVDTAFEKITQLKYNQTVSLKDKGYGISITPLNA 151


>AE014297-4305|AAN14148.1|  664|Drosophila melanogaster CG1957-PB,
           isoform B protein.
          Length = 664

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = +1

Query: 433 ELYSYKF*LIEVHVFFLSETSNATSKMVALKFNATILXRDRA-GVNARHSNA 585
           +LY   F + +  +F L +   A  K+  LK+N T+  +D+  G++    NA
Sbjct: 8   DLYMSHFNMGDFDLFSLDDVDTAFEKITQLKYNQTVSLKDKGYGISITPLNA 59


>AE014297-4304|AAF56844.1|  756|Drosophila melanogaster CG1957-PA,
           isoform A protein.
          Length = 756

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = +1

Query: 433 ELYSYKF*LIEVHVFFLSETSNATSKMVALKFNATILXRDRA-GVNARHSNA 585
           +LY   F + +  +F L +   A  K+  LK+N T+  +D+  G++    NA
Sbjct: 100 DLYMSHFNMGDFDLFSLDDVDTAFEKITQLKYNQTVSLKDKGYGISITPLNA 151


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,901,350
Number of Sequences: 53049
Number of extensions: 406191
Number of successful extensions: 751
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 737
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 751
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2889369000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)