Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_pT_A09
(372 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 22 2.7
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 21 4.7
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 21 4.7
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 21 4.7
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 21 4.7
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 21 4.7
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 21 4.7
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 21 4.7
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 21 4.7
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 21 4.7
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 21 4.7
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 21 4.7
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 21.8 bits (44), Expect = 2.7
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = -2
Query: 164 ECLIFNVSVMLCL 126
EC++FN +LC+
Sbjct: 138 ECIVFNSGTILCV 150
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.0 bits (42), Expect = 4.7
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +2
Query: 152 ILNTLSRLYNLNTYCKKY 205
I+++LS YN N Y Y
Sbjct: 81 IISSLSNNYNYNNYNNNY 98
Score = 20.2 bits (40), Expect = 8.2
Identities = 7/20 (35%), Positives = 12/20 (60%)
Frame = +2
Query: 158 NTLSRLYNLNTYCKKYSKAK 217
N +L T CK+YS+++
Sbjct: 24 NEKEKLLEERTSCKRYSRSR 43
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.0 bits (42), Expect = 4.7
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +2
Query: 152 ILNTLSRLYNLNTYCKKY 205
I+++LS YN N Y Y
Sbjct: 81 IISSLSNNYNYNNYNNNY 98
Score = 20.2 bits (40), Expect = 8.2
Identities = 7/20 (35%), Positives = 12/20 (60%)
Frame = +2
Query: 158 NTLSRLYNLNTYCKKYSKAK 217
N +L T CK+YS+++
Sbjct: 24 NEKEKLLEERTSCKRYSRSR 43
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.0 bits (42), Expect = 4.7
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +2
Query: 152 ILNTLSRLYNLNTYCKKY 205
I+++LS YN N Y Y
Sbjct: 81 IISSLSNNYNYNNYNNNY 98
Score = 20.2 bits (40), Expect = 8.2
Identities = 7/20 (35%), Positives = 12/20 (60%)
Frame = +2
Query: 158 NTLSRLYNLNTYCKKYSKAK 217
N +L T CK+YS+++
Sbjct: 24 NEKEKLLEERTSCKRYSRSR 43
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.0 bits (42), Expect = 4.7
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +2
Query: 152 ILNTLSRLYNLNTYCKKY 205
I+++LS YN N Y Y
Sbjct: 81 IISSLSNNYNYNNYNNNY 98
Score = 20.2 bits (40), Expect = 8.2
Identities = 7/20 (35%), Positives = 12/20 (60%)
Frame = +2
Query: 158 NTLSRLYNLNTYCKKYSKAK 217
N +L T CK+YS+++
Sbjct: 24 NEKEKLLEERTSCKRYSRSR 43
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 21.0 bits (42), Expect = 4.7
Identities = 7/24 (29%), Positives = 14/24 (58%)
Frame = -2
Query: 92 KIYFYTFILDKKNKVISTSITTWN 21
K +TFI++ + +++ I WN
Sbjct: 298 KYLLFTFIMNTVSILVTVIIINWN 321
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.0 bits (42), Expect = 4.7
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +2
Query: 152 ILNTLSRLYNLNTYCKKY 205
I+++LS YN N Y Y
Sbjct: 314 IISSLSNNYNYNNYNNNY 331
Score = 20.2 bits (40), Expect = 8.2
Identities = 7/20 (35%), Positives = 12/20 (60%)
Frame = +2
Query: 158 NTLSRLYNLNTYCKKYSKAK 217
N +L T CK+YS+++
Sbjct: 257 NEKEKLLEERTSCKRYSRSR 276
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.0 bits (42), Expect = 4.7
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +2
Query: 152 ILNTLSRLYNLNTYCKKY 205
I+++LS YN N Y Y
Sbjct: 314 IISSLSNNYNYNNYNNNY 331
Score = 20.2 bits (40), Expect = 8.2
Identities = 7/20 (35%), Positives = 12/20 (60%)
Frame = +2
Query: 158 NTLSRLYNLNTYCKKYSKAK 217
N +L T CK+YS+++
Sbjct: 257 NEKEKLLEERTSCKRYSRSR 276
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.0 bits (42), Expect = 4.7
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +2
Query: 152 ILNTLSRLYNLNTYCKKY 205
I+++LS YN N Y Y
Sbjct: 314 IISSLSNNYNYNNYNNNY 331
Score = 20.2 bits (40), Expect = 8.2
Identities = 7/20 (35%), Positives = 12/20 (60%)
Frame = +2
Query: 158 NTLSRLYNLNTYCKKYSKAK 217
N +L T CK+YS+++
Sbjct: 257 NEKEKLLEERTSCKRYSRSR 276
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.0 bits (42), Expect = 4.7
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +2
Query: 152 ILNTLSRLYNLNTYCKKY 205
I+++LS YN N Y Y
Sbjct: 314 IISSLSNNYNYNNYNNNY 331
Score = 20.2 bits (40), Expect = 8.2
Identities = 7/20 (35%), Positives = 12/20 (60%)
Frame = +2
Query: 158 NTLSRLYNLNTYCKKYSKAK 217
N +L T CK+YS+++
Sbjct: 257 NEKEKLLEERTSCKRYSRSR 276
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.0 bits (42), Expect = 4.7
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +2
Query: 152 ILNTLSRLYNLNTYCKKY 205
I+++LS YN N Y Y
Sbjct: 314 IISSLSNNYNYNNYNNNY 331
Score = 20.2 bits (40), Expect = 8.2
Identities = 7/20 (35%), Positives = 12/20 (60%)
Frame = +2
Query: 158 NTLSRLYNLNTYCKKYSKAK 217
N +L T CK+YS+++
Sbjct: 257 NEKEKLLEERTSCKRYSRSR 276
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.0 bits (42), Expect = 4.7
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +2
Query: 152 ILNTLSRLYNLNTYCKKY 205
I+++LS YN N Y Y
Sbjct: 303 IISSLSNNYNYNNYNNNY 320
Score = 20.2 bits (40), Expect = 8.2
Identities = 7/20 (35%), Positives = 12/20 (60%)
Frame = +2
Query: 158 NTLSRLYNLNTYCKKYSKAK 217
N +L T CK+YS+++
Sbjct: 246 NEKEKLLEERTSCKRYSRSR 265
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,572
Number of Sequences: 438
Number of extensions: 1599
Number of successful extensions: 32
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used: 8928360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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