Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_pT_A06
         (798 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex det...    23   3.3  
DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex det...    23   3.3  
DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.              23   4.3  
DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex det...    22   7.6  

>DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +2

Query: 149 YEYSFKNTLTNDNKYIKK 202
           Y+Y++ N   N+N Y KK
Sbjct: 94  YKYNYNNNNYNNNNYNKK 111


>DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +2

Query: 149 YEYSFKNTLTNDNKYIKK 202
           Y+Y++ N   N+N Y KK
Sbjct: 94  YKYNYNNNNYNNNNYNKK 111


>DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.
          Length = 143

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = -3

Query: 580 SNVNLWLKLEKSFILFKSLYLYHSIRY 500
           SNV+   K EKSF+  K +Y  + I +
Sbjct: 114 SNVDSSDKCEKSFMFMKCMYEVNPIAF 140


>DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +2

Query: 149 YEYSFKNTLTNDNKYIKKKLMQASY 223
           Y+Y++ N    +N    KKL   +Y
Sbjct: 96  YKYNYNNKYNYNNNNYNKKLYYKNY 120


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,024
Number of Sequences: 438
Number of extensions: 4168
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25246416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)