Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_P18
         (617 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    24   1.2  
AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.    22   3.6  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    22   3.6  
AJ888865-1|CAI61930.1|  108|Tribolium castaneum modulator of act...    21   6.3  
AJ622939-1|CAF22091.1|  108|Tribolium castaneum ETS activity mod...    21   6.3  
AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    21   8.3  

>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 12/48 (25%), Positives = 25/48 (52%)
 Frame = +3

Query: 183 EAIELIGLVRERKCLWDRRCTEYRNKYDRLKAWEEICEVLDPNFHRVN 326
           + IE + ++R R  + +R   E  +KY   +    +C+  D + HR++
Sbjct: 177 QTIEFVSIIRNRFVILNRYIEESISKYKHAELVMPLCKSCDLH-HRLS 223


>AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.
          Length = 209

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = -3

Query: 447 PRRVCTASPGSSPSSVT*RKRLVCSSIFLTS 355
           PRR  ++ P +  +S   R+ ++ SS+FL S
Sbjct: 121 PRREWSSPPDARAASDAARRGVLYSSVFLGS 151


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = -3

Query: 447 PRRVCTASPGSSPSSVT*RKRLVCSSIFLTS 355
           PRR  ++ P +  +S   R+ ++ SS+FL S
Sbjct: 277 PRREWSSPPDARAASDAARRGVLYSSVFLGS 307


>AJ888865-1|CAI61930.1|  108|Tribolium castaneum modulator of
           activity of ets genes protein.
          Length = 108

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 12/39 (30%), Positives = 17/39 (43%)
 Frame = +3

Query: 447 ALEFLDAVFVYKTKSSQKVDSRLSDEDNATEDSIEWLNE 563
           AL+  DA  V    + +       DEDN  +D  +W  E
Sbjct: 4   ALQTADAAPVRYGPTERWQRLSFDDEDNLPKDPRQWTRE 42


>AJ622939-1|CAF22091.1|  108|Tribolium castaneum ETS activity
           modulator protein.
          Length = 108

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 12/39 (30%), Positives = 17/39 (43%)
 Frame = +3

Query: 447 ALEFLDAVFVYKTKSSQKVDSRLSDEDNATEDSIEWLNE 563
           AL+  DA  V    + +       DEDN  +D  +W  E
Sbjct: 4   ALQTADAAPVRYGPTERWQRLSFDDEDNLPKDPRQWTRE 42


>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +3

Query: 486 KSSQKVDSRLSDEDNATED 542
           K  ++V+ RLSD D+  E+
Sbjct: 23  KEDEEVEHRLSDRDDDDEN 41


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,090
Number of Sequences: 336
Number of extensions: 3246
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15770591
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)