Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_F_P13
(769 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF039018-1|AAB96665.1| 364|Homo sapiens actinin-associated LIM ... 42 0.002
AF002280-1|AAC16670.1| 364|Homo sapiens alpha-actinin-2 associa... 41 0.004
AK222966-1|BAD96686.1| 364|Homo sapiens PDZ and LIM domain 3 va... 40 0.010
BC027870-1|AAH27870.1| 316|Homo sapiens PDLIM3 protein protein. 38 0.040
AF002282-1|AAC16672.1| 316|Homo sapiens alpha-actinin-2 associa... 38 0.040
U90878-1|AAC05580.1| 329|Homo sapiens carboxyl terminal LIM dom... 35 0.28
BC018755-1|AAH18755.1| 329|Homo sapiens PDZ and LIM domain 1 (e... 35 0.28
BC000915-1|AAH00915.1| 329|Homo sapiens PDZ and LIM domain 1 (e... 35 0.28
AY923052-1|AAW82438.1| 329|Homo sapiens PDZ and LIM domain 1 (e... 35 0.28
AL160288-1|CAH70720.1| 329|Homo sapiens PDZ and LIM domain 1 (e... 35 0.28
AL157834-1|CAH72341.1| 329|Homo sapiens PDZ and LIM domain 1 (e... 35 0.28
AJ310549-1|CAC32846.1| 329|Homo sapiens CLP-36 protein protein. 35 0.28
BT007341-1|AAP36005.1| 189|Homo sapiens alpha-actinin-2-associa... 35 0.37
BC001017-1|AAH01017.1| 189|Homo sapiens PDLIM3 protein protein. 35 0.37
BC105006-1|AAI05007.1| 312|Homo sapiens PRP38 pre-mRNA processi... 33 0.85
BC105004-1|AAI05005.1| 312|Homo sapiens PRP38 pre-mRNA processi... 33 0.85
BC063655-1|AAH63655.1| 125|Homo sapiens PRP38 pre-mRNA processi... 33 0.85
BC000777-1|AAH00777.2| 125|Homo sapiens PRP38 pre-mRNA processi... 33 0.85
AL513218-9|CAI12289.1| 312|Homo sapiens PRP38 pre-mRNA processi... 33 0.85
AK092038-1|BAC03796.1| 312|Homo sapiens protein ( Homo sapiens ... 33 0.85
AK027842-1|BAB55405.1| 236|Homo sapiens protein ( Homo sapiens ... 33 0.85
AB002344-1|BAA21572.2| 1682|Homo sapiens KIAA0346 protein. 32 2.6
U91329-1|AAC52117.1| 1103|Homo sapiens kinesin-like motor protei... 30 7.9
BC034993-1|AAH34993.1| 1103|Homo sapiens kinesin family member 1... 30 7.9
AB014606-1|BAA31681.2| 1123|Homo sapiens KIAA0706 protein protein. 30 7.9
>AF039018-1|AAB96665.1| 364|Homo sapiens actinin-associated LIM
protein protein.
Length = 364
Score = 41.9 bits (94), Expect = 0.002
Identities = 30/69 (43%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = +3
Query: 246 LEMAT-GPKIVHKQFNSPIGLYSQQNIKETLNKHLKNLDNGSVGIDFNNPTTDKPANLAN 422
LEM G KIVH QFN+P+ LYS NI ETL + G + N PT P
Sbjct: 176 LEMELPGVKIVHAQFNTPMQLYSDDNIMETLQGQVSTA-LGETPL-MNEPTASVP---PE 230
Query: 423 SAVLRMLEE 449
S V RML +
Sbjct: 231 SDVYRMLHD 239
>AF002280-1|AAC16670.1| 364|Homo sapiens alpha-actinin-2 associated
LIM protein protein.
Length = 364
Score = 41.1 bits (92), Expect = 0.004
Identities = 29/69 (42%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = +3
Query: 246 LEMAT-GPKIVHKQFNSPIGLYSQQNIKETLNKHLKNLDNGSVGIDFNNPTTDKPANLAN 422
LEM G KIVH QFN+P+ LYS NI ETL + G + + + PT P
Sbjct: 176 LEMELPGVKIVHAQFNTPMQLYSDDNIMETLQGQVSTA-LGEIPL-MSEPTASVP---PE 230
Query: 423 SAVLRMLEE 449
S V RML +
Sbjct: 231 SDVYRMLHD 239
>AK222966-1|BAD96686.1| 364|Homo sapiens PDZ and LIM domain 3
variant protein.
Length = 364
Score = 39.9 bits (89), Expect = 0.010
Identities = 29/69 (42%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = +3
Query: 246 LEMAT-GPKIVHKQFNSPIGLYSQQNIKETLNKHLKNLDNGSVGIDFNNPTTDKPANLAN 422
LEM G KIVH QFN+P+ LYS NI ETL + G + + PT P
Sbjct: 176 LEMELPGVKIVHAQFNTPMQLYSDDNIMETLQGQVSTA-LGETPL-MSEPTASVP---PE 230
Query: 423 SAVLRMLEE 449
S V RML +
Sbjct: 231 SDVYRMLHD 239
>BC027870-1|AAH27870.1| 316|Homo sapiens PDLIM3 protein protein.
Length = 316
Score = 37.9 bits (84), Expect = 0.040
Identities = 24/61 (39%), Positives = 32/61 (52%)
Frame = +3
Query: 267 KIVHKQFNSPIGLYSQQNIKETLNKHLKNLDNGSVGIDFNNPTTDKPANLANSAVLRMLE 446
++V +NSPIGLYS NI++ L+ L+ L S N PT P S V RML
Sbjct: 137 QVVSASYNSPIGLYSTSNIQDALHGQLRGLIPSS---PQNEPTASVP---PESDVYRMLH 190
Query: 447 E 449
+
Sbjct: 191 D 191
>AF002282-1|AAC16672.1| 316|Homo sapiens alpha-actinin-2 associated
LIM protein protein.
Length = 316
Score = 37.9 bits (84), Expect = 0.040
Identities = 24/61 (39%), Positives = 32/61 (52%)
Frame = +3
Query: 267 KIVHKQFNSPIGLYSQQNIKETLNKHLKNLDNGSVGIDFNNPTTDKPANLANSAVLRMLE 446
++V +NSPIGLYS NI++ L+ L+ L S N PT P S V RML
Sbjct: 137 QVVSASYNSPIGLYSTSNIQDALHGQLRGLIPSS---PQNEPTASVP---PESDVYRMLH 190
Query: 447 E 449
+
Sbjct: 191 D 191
>U90878-1|AAC05580.1| 329|Homo sapiens carboxyl terminal LIM domain
protein protein.
Length = 329
Score = 35.1 bits (77), Expect = 0.28
Identities = 23/73 (31%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Frame = +3
Query: 255 ATGPKIVHKQFNSPIGLYSQQNIKETLNKHLKNLDNGSVGIDFNNPTTD---KPANLA-- 419
+T +++ Q+N+P GLYS +NI N L++ S G++ N+ D P++L
Sbjct: 134 STTARVITNQYNNPAGLYSSENI-SNFNNALESKTAAS-GVEANSRPLDHAQPPSSLVID 191
Query: 420 -NSAVLRMLEEEE 455
S V +ML+E++
Sbjct: 192 KESEVYKMLQEKQ 204
>BC018755-1|AAH18755.1| 329|Homo sapiens PDZ and LIM domain 1
(elfin) protein.
Length = 329
Score = 35.1 bits (77), Expect = 0.28
Identities = 23/73 (31%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Frame = +3
Query: 255 ATGPKIVHKQFNSPIGLYSQQNIKETLNKHLKNLDNGSVGIDFNNPTTD---KPANLA-- 419
+T +++ Q+N+P GLYS +NI N L++ S G++ N+ D P++L
Sbjct: 134 STTARVITNQYNNPAGLYSSENI-SNFNNALESKTAAS-GVEANSRPLDHAQPPSSLVID 191
Query: 420 -NSAVLRMLEEEE 455
S V +ML+E++
Sbjct: 192 KESEVYKMLQEKQ 204
>BC000915-1|AAH00915.1| 329|Homo sapiens PDZ and LIM domain 1
(elfin) protein.
Length = 329
Score = 35.1 bits (77), Expect = 0.28
Identities = 23/73 (31%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Frame = +3
Query: 255 ATGPKIVHKQFNSPIGLYSQQNIKETLNKHLKNLDNGSVGIDFNNPTTD---KPANLA-- 419
+T +++ Q+N+P GLYS +NI N L++ S G++ N+ D P++L
Sbjct: 134 STTARVITNQYNNPAGLYSSENI-SNFNNALESKTAAS-GVEANSRPLDHAQPPSSLVID 191
Query: 420 -NSAVLRMLEEEE 455
S V +ML+E++
Sbjct: 192 KESEVYKMLQEKQ 204
>AY923052-1|AAW82438.1| 329|Homo sapiens PDZ and LIM domain 1
(elfin) protein.
Length = 329
Score = 35.1 bits (77), Expect = 0.28
Identities = 23/73 (31%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Frame = +3
Query: 255 ATGPKIVHKQFNSPIGLYSQQNIKETLNKHLKNLDNGSVGIDFNNPTTD---KPANLA-- 419
+T +++ Q+N+P GLYS +NI N L++ S G++ N+ D P++L
Sbjct: 134 STTARVITNQYNNPAGLYSSENI-SNFNNALESKTAAS-GVEANSRPLDHAQPPSSLVID 191
Query: 420 -NSAVLRMLEEEE 455
S V +ML+E++
Sbjct: 192 KESEVYKMLQEKQ 204
>AL160288-1|CAH70720.1| 329|Homo sapiens PDZ and LIM domain 1
(elfin) protein.
Length = 329
Score = 35.1 bits (77), Expect = 0.28
Identities = 23/73 (31%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Frame = +3
Query: 255 ATGPKIVHKQFNSPIGLYSQQNIKETLNKHLKNLDNGSVGIDFNNPTTD---KPANLA-- 419
+T +++ Q+N+P GLYS +NI N L++ S G++ N+ D P++L
Sbjct: 134 STTARVITNQYNNPAGLYSSENI-SNFNNALESKTAAS-GVEANSRPLDHAQPPSSLVID 191
Query: 420 -NSAVLRMLEEEE 455
S V +ML+E++
Sbjct: 192 KESEVYKMLQEKQ 204
>AL157834-1|CAH72341.1| 329|Homo sapiens PDZ and LIM domain 1
(elfin) protein.
Length = 329
Score = 35.1 bits (77), Expect = 0.28
Identities = 23/73 (31%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Frame = +3
Query: 255 ATGPKIVHKQFNSPIGLYSQQNIKETLNKHLKNLDNGSVGIDFNNPTTD---KPANLA-- 419
+T +++ Q+N+P GLYS +NI N L++ S G++ N+ D P++L
Sbjct: 134 STTARVITNQYNNPAGLYSSENI-SNFNNALESKTAAS-GVEANSRPLDHAQPPSSLVID 191
Query: 420 -NSAVLRMLEEEE 455
S V +ML+E++
Sbjct: 192 KESEVYKMLQEKQ 204
>AJ310549-1|CAC32846.1| 329|Homo sapiens CLP-36 protein protein.
Length = 329
Score = 35.1 bits (77), Expect = 0.28
Identities = 23/73 (31%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Frame = +3
Query: 255 ATGPKIVHKQFNSPIGLYSQQNIKETLNKHLKNLDNGSVGIDFNNPTTD---KPANLA-- 419
+T +++ Q+N+P GLYS +NI N L++ S G++ N+ D P++L
Sbjct: 134 STTARVITNQYNNPAGLYSSENI-SNFNNALESKTAAS-GVEANSRPLDHAQPPSSLVID 191
Query: 420 -NSAVLRMLEEEE 455
S V +ML+E++
Sbjct: 192 KESEVYKMLQEKQ 204
>BT007341-1|AAP36005.1| 189|Homo sapiens alpha-actinin-2-associated
LIM protein protein.
Length = 189
Score = 34.7 bits (76), Expect = 0.37
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +3
Query: 267 KIVHKQFNSPIGLYSQQNIKETLNKHLKNL 356
++V +NSPIGLYS NI++ L+ L+ L
Sbjct: 137 QVVSASYNSPIGLYSTSNIQDALHGQLRGL 166
>BC001017-1|AAH01017.1| 189|Homo sapiens PDLIM3 protein protein.
Length = 189
Score = 34.7 bits (76), Expect = 0.37
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +3
Query: 267 KIVHKQFNSPIGLYSQQNIKETLNKHLKNL 356
++V +NSPIGLYS NI++ L+ L+ L
Sbjct: 137 QVVSASYNSPIGLYSTSNIQDALHGQLRGL 166
>BC105006-1|AAI05007.1| 312|Homo sapiens PRP38 pre-mRNA processing
factor 38 (yeast) domain containing A, isoform 2
protein.
Length = 312
Score = 33.5 bits (73), Expect = 0.85
Identities = 29/100 (29%), Positives = 38/100 (38%)
Frame = +1
Query: 445 KRKSVTAKDTVRRKWCGLQYPKRTDIIIHNRHPDRSRATRSRFPLNLSTHRSLLIRSPRT 624
K + V + D RR + L P+R+ + + R RS RSR P S SPR
Sbjct: 203 KLERVPSPDHRRRSYRDLDKPRRSPTLRYRRSRSRSPRRRSRSPKRRSP-------SPRR 255
Query: 625 RPHRGTSNHLHQPSLSVRNLRFTXNHPRCSLXNRPLRHLK 744
HR S H+ R R P +R H K
Sbjct: 256 ERHRSKSPRRHRSRSRDRRHRSRSKSPGHHRSHRHRSHSK 295
>BC105004-1|AAI05005.1| 312|Homo sapiens PRP38 pre-mRNA processing
factor 38 (yeast) domain containing A protein.
Length = 312
Score = 33.5 bits (73), Expect = 0.85
Identities = 29/100 (29%), Positives = 38/100 (38%)
Frame = +1
Query: 445 KRKSVTAKDTVRRKWCGLQYPKRTDIIIHNRHPDRSRATRSRFPLNLSTHRSLLIRSPRT 624
K + V + D RR + L P+R+ + + R RS RSR P S SPR
Sbjct: 203 KLERVPSPDHRRRSYRDLDKPRRSPTLRYRRSRSRSPRRRSRSPKRRSP-------SPRR 255
Query: 625 RPHRGTSNHLHQPSLSVRNLRFTXNHPRCSLXNRPLRHLK 744
HR S H+ R R P +R H K
Sbjct: 256 ERHRSKSPRRHRSRSRDRRHRSRSKSPGHHRSHRHRSHSK 295
>BC063655-1|AAH63655.1| 125|Homo sapiens PRP38 pre-mRNA processing
factor 38 (yeast) domain containing A protein.
Length = 125
Score = 33.5 bits (73), Expect = 0.85
Identities = 29/100 (29%), Positives = 38/100 (38%)
Frame = +1
Query: 445 KRKSVTAKDTVRRKWCGLQYPKRTDIIIHNRHPDRSRATRSRFPLNLSTHRSLLIRSPRT 624
K + V + D RR + L P+R+ + + R RS RSR P S SPR
Sbjct: 16 KLERVPSPDHRRRSYRDLDKPRRSPTLRYRRSRSRSPRRRSRSPKRRSP-------SPRR 68
Query: 625 RPHRGTSNHLHQPSLSVRNLRFTXNHPRCSLXNRPLRHLK 744
HR S H+ R R P +R H K
Sbjct: 69 ERHRSKSPRRHRSRSRDRRHRSRSKSPGHHRSHRHRSHSK 108
>BC000777-1|AAH00777.2| 125|Homo sapiens PRP38 pre-mRNA processing
factor 38 (yeast) domain containing A protein.
Length = 125
Score = 33.5 bits (73), Expect = 0.85
Identities = 29/100 (29%), Positives = 38/100 (38%)
Frame = +1
Query: 445 KRKSVTAKDTVRRKWCGLQYPKRTDIIIHNRHPDRSRATRSRFPLNLSTHRSLLIRSPRT 624
K + V + D RR + L P+R+ + + R RS RSR P S SPR
Sbjct: 16 KLERVPSPDHRRRSYRDLDKPRRSPTLRYRRSRSRSPRRRSRSPKRRSP-------SPRR 68
Query: 625 RPHRGTSNHLHQPSLSVRNLRFTXNHPRCSLXNRPLRHLK 744
HR S H+ R R P +R H K
Sbjct: 69 ERHRSKSPRRHRSRSRDRRHRSRSKSPGHHRSHRHRSHSK 108
>AL513218-9|CAI12289.1| 312|Homo sapiens PRP38 pre-mRNA processing
factor 38 (yeast) domain containing A protein.
Length = 312
Score = 33.5 bits (73), Expect = 0.85
Identities = 29/100 (29%), Positives = 38/100 (38%)
Frame = +1
Query: 445 KRKSVTAKDTVRRKWCGLQYPKRTDIIIHNRHPDRSRATRSRFPLNLSTHRSLLIRSPRT 624
K + V + D RR + L P+R+ + + R RS RSR P S SPR
Sbjct: 203 KLERVPSPDHRRRSYRDLDKPRRSPTLRYRRSRSRSPRRRSRSPKRRSP-------SPRR 255
Query: 625 RPHRGTSNHLHQPSLSVRNLRFTXNHPRCSLXNRPLRHLK 744
HR S H+ R R P +R H K
Sbjct: 256 ERHRSKSPRRHRSRSRDRRHRSRSKSPGHHRSHRHRSHSK 295
>AK092038-1|BAC03796.1| 312|Homo sapiens protein ( Homo sapiens
cDNA FLJ34719 fis, clone MESAN2005689, weakly similar to
SPLICING FACTOR, ARGININE/SERINE-RICH 2. ).
Length = 312
Score = 33.5 bits (73), Expect = 0.85
Identities = 29/100 (29%), Positives = 38/100 (38%)
Frame = +1
Query: 445 KRKSVTAKDTVRRKWCGLQYPKRTDIIIHNRHPDRSRATRSRFPLNLSTHRSLLIRSPRT 624
K + V + D RR + L P+R+ + + R RS RSR P S SPR
Sbjct: 203 KLERVPSPDHRRRSYRDLDKPRRSPTLRYRRSRSRSPRRRSRSPKRRSP-------SPRR 255
Query: 625 RPHRGTSNHLHQPSLSVRNLRFTXNHPRCSLXNRPLRHLK 744
HR S H+ R R P +R H K
Sbjct: 256 ERHRSKSPRRHRSRSRDRRHRSRSKSPGHHRSHRHRSHSK 295
>AK027842-1|BAB55405.1| 236|Homo sapiens protein ( Homo sapiens
cDNA FLJ14936 fis, clone PLACE1010194, weakly similar to
SPLICING FACTOR, ARGININE/SERINE-RICH 2. ).
Length = 236
Score = 33.5 bits (73), Expect = 0.85
Identities = 29/100 (29%), Positives = 38/100 (38%)
Frame = +1
Query: 445 KRKSVTAKDTVRRKWCGLQYPKRTDIIIHNRHPDRSRATRSRFPLNLSTHRSLLIRSPRT 624
K + V + D RR + L P+R+ + + R RS RSR P S SPR
Sbjct: 127 KLERVPSPDHRRRSYRDLDKPRRSPTLRYRRSRSRSPRRRSRSPKRRSP-------SPRR 179
Query: 625 RPHRGTSNHLHQPSLSVRNLRFTXNHPRCSLXNRPLRHLK 744
HR S H+ R R P +R H K
Sbjct: 180 ERHRSKSPRRHRSRSRDRRHRSRSKSPGHHRSHRHRSHSK 219
>AB002344-1|BAA21572.2| 1682|Homo sapiens KIAA0346 protein.
Length = 1682
Score = 31.9 bits (69), Expect = 2.6
Identities = 26/111 (23%), Positives = 37/111 (33%), Gaps = 2/111 (1%)
Frame = +3
Query: 381 FNNPTTDK--PANLANSAVLRMLEEEERNRKGYSQKKVVWPPVPETNGYHNPQQTPGXXX 554
F P K P LAN +++ML+E R + Q + P P Q+P
Sbjct: 682 FEEPAEFKILPDGLAN--IMKMLDESIRKEEEQQQHEAGVAPQPPLKEPFASLQSPFPTD 739
Query: 555 XXXXXXXXXXXXXXXXXXXXXXXXTTQRHFEPPPSTITLRPQPPVHXKPSP 707
T + +PPP+ L P PP+ P P
Sbjct: 740 TAPTTTAPAVAVTTTTTTTTTTTATQEEEKKPPPA---LPPPPPLAKFPPP 787
>U91329-1|AAC52117.1| 1103|Homo sapiens kinesin-like motor protein
KIF1C protein.
Length = 1103
Score = 30.3 bits (65), Expect = 7.9
Identities = 14/38 (36%), Positives = 16/38 (42%)
Frame = +3
Query: 651 PPSTITLRPQPPVHXKPSPVFAXQPAAASFKGGVNMRG 764
PP +T P P PSP + P S GG RG
Sbjct: 1005 PPEEVTPHPATPARRPPSPRRSHHPRRNSLDGGGRSRG 1042
>BC034993-1|AAH34993.1| 1103|Homo sapiens kinesin family member 1C
protein.
Length = 1103
Score = 30.3 bits (65), Expect = 7.9
Identities = 14/38 (36%), Positives = 16/38 (42%)
Frame = +3
Query: 651 PPSTITLRPQPPVHXKPSPVFAXQPAAASFKGGVNMRG 764
PP +T P P PSP + P S GG RG
Sbjct: 1005 PPEEVTPHPATPARRPPSPRRSHHPRRNSLDGGGRSRG 1042
>AB014606-1|BAA31681.2| 1123|Homo sapiens KIAA0706 protein protein.
Length = 1123
Score = 30.3 bits (65), Expect = 7.9
Identities = 14/38 (36%), Positives = 16/38 (42%)
Frame = +3
Query: 651 PPSTITLRPQPPVHXKPSPVFAXQPAAASFKGGVNMRG 764
PP +T P P PSP + P S GG RG
Sbjct: 1025 PPEEVTPHPATPARRPPSPRRSHHPRRNSLDGGGRSRG 1062
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,897,336
Number of Sequences: 237096
Number of extensions: 2344760
Number of successful extensions: 7286
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 6587
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7248
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9255747988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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