Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_F_P09
(738 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC16A11.09c |tim23||mitochondrial inner membrane presequence t... 35 0.011
SPAC1783.01 |||FAD binding protein|Schizosaccharomyces pombe|chr... 30 0.30
SPBC342.03 |||1,3-beta-glucanosyltransferase |Schizosaccharomyce... 29 0.52
SPBC83.13 |||mitochondrial tricarboxylic acid transporter|Schizo... 27 2.8
SPBC25H2.04c |tim22||TIM22 inner membrane protein import complex... 27 2.8
SPAC11E3.12 |||conserved eukaryotic protein|Schizosaccharomyces ... 26 4.9
SPBC16A3.13 |meu7|aah4|alpha-amylase homolog Aah4|Schizosaccharo... 26 6.4
SPCC594.01 ||SPCC736.16|DUF1769 family protein|Schizosaccharomyc... 26 6.4
SPAC3H1.12c |snt2||Lid2 complex subunit Snt2 |Schizosaccharomyce... 25 8.5
SPBP4H10.16c |||phosphatase activator |Schizosaccharomyces pombe... 25 8.5
SPAPB1E7.07 |glt1||glutamate synthase Glt1 |Schizosaccharomyces ... 25 8.5
SPCC417.09c |||transcription factor |Schizosaccharomyces pombe|c... 25 8.5
>SPCC16A11.09c |tim23||mitochondrial inner membrane presequence
translocase complex subunit Tim23|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 210
Score = 35.1 bits (77), Expect = 0.011
Identities = 17/26 (65%), Positives = 19/26 (73%)
Frame = +1
Query: 538 AGALTGALYKANLGLTAMIVGGSLGA 615
AGALTGALYK+ GL AM + SL A
Sbjct: 167 AGALTGALYKSTRGLRAMAISSSLVA 192
>SPAC1783.01 |||FAD binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 583
Score = 30.3 bits (65), Expect = 0.30
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Frame = -2
Query: 665 VIFNIPIIKSPPI--VLNTAPREP--PTIIAVNPKFALYNAPVSAPAVVYSMSVVSPRY 501
V IP I +PP+ V++ +P P P+ + +P + ++ AP+ V+ + V Y
Sbjct: 127 VSLGIPSISNPPVDTVISDSPTSPHPPSFVQPHPPYGIFAAPILDVRVLTNPGAVKRTY 185
>SPBC342.03 |||1,3-beta-glucanosyltransferase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 456
Score = 29.5 bits (63), Expect = 0.52
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -2
Query: 317 DETNPPKQTPTNAPHNVDCTTVCSSGETSSN 225
DE+ + P N P NV TT +SG TSS+
Sbjct: 400 DESTSRRPKPKNKPSNVTSTTSYTSGMTSSS 430
>SPBC83.13 |||mitochondrial tricarboxylic acid
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 293
Score = 27.1 bits (57), Expect = 2.8
Identities = 14/48 (29%), Positives = 21/48 (43%)
Frame = +1
Query: 412 IGFAKGAYKWGWKLSIFTGMFSLIATTISAYRGDTTLIEYTTAGALTG 555
+GF +G W W + G L + Y G + T+AGA+ G
Sbjct: 61 LGFYQGLIPWAWIEASTKGAVLLFTSAELEYWGRRLGLGATSAGAIAG 108
>SPBC25H2.04c |tim22||TIM22 inner membrane protein import complex
subunit Tim22|Schizosaccharomyces pombe|chr 2|||Manual
Length = 175
Score = 27.1 bits (57), Expect = 2.8
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = +1
Query: 493 ISAYRGDTTLIEYTTAGALTGALYKANLGLTAMIVGGS 606
I A+R T + AG TG G A+++GG+
Sbjct: 121 IEAFRAKTDIYNAIAAGVFTGGALAVRSGPKAIVLGGA 158
>SPAC11E3.12 |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 162
Score = 26.2 bits (55), Expect = 4.9
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = +3
Query: 384 KEKTARLCNNWICQRCLQ 437
K+ R+CN+W+CQ+ +
Sbjct: 81 KKPRVRICNSWMCQQAAE 98
>SPBC16A3.13 |meu7|aah4|alpha-amylase homolog
Aah4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 774
Score = 25.8 bits (54), Expect = 6.4
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = -1
Query: 108 KTWRQPEHRSEHFDKSPCPF*XQXDKTRQHEP 13
K W+ EH S H DK P P K H+P
Sbjct: 221 KPWKHEEHCSCHHDKFPRPVPHNGTKP-DHKP 251
Score = 25.8 bits (54), Expect = 6.4
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = -1
Query: 108 KTWRQPEHRSEHFDKSPCPF*XQXDKTRQHEP 13
K W+ EH S H DK P P K H+P
Sbjct: 250 KPWKHEEHCSCHHDKFPRPVPHNGTKP-DHKP 280
>SPCC594.01 ||SPCC736.16|DUF1769 family protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 791
Score = 25.8 bits (54), Expect = 6.4
Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Frame = -2
Query: 317 DETNPPKQTPTNAPHNVDCTTVCS-SGETSS 228
D NPP TP N D + V S SG T++
Sbjct: 214 DSPNPPAATPATVADNDDLSIVSSDSGNTTA 244
>SPAC3H1.12c |snt2||Lid2 complex subunit Snt2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1131
Score = 25.4 bits (53), Expect = 8.5
Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 39 VVXKKGKG-SCRNAPNGAQVVSKFCLTNFSXKQXKC 143
+V + GKG + N P+ +V K+C +FS + C
Sbjct: 245 IVTEYGKGRALLNEPSNCKVCKKWCAFDFSVQCADC 280
>SPBP4H10.16c |||phosphatase activator |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 295
Score = 25.4 bits (53), Expect = 8.5
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = +3
Query: 594 CWWFPRSCIKYNRWTFNYWNIKNYW 668
CWW + I YN F W ++ W
Sbjct: 255 CWWDSSTSITYNGIEFATW-VRRVW 278
>SPAPB1E7.07 |glt1||glutamate synthase Glt1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2111
Score = 25.4 bits (53), Expect = 8.5
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = -2
Query: 305 PPKQTPTNAPHNVDCTTVCSSGETSSNSFFLYMALTR 195
PP+ +P N+ VC G TS ++F +A R
Sbjct: 1401 PPRVSPFKPEENMIIGNVCLYGATSGHAFISGVAAER 1437
>SPCC417.09c |||transcription factor |Schizosaccharomyces pombe|chr
3|||Manual
Length = 767
Score = 25.4 bits (53), Expect = 8.5
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +3
Query: 381 CKEKTARLCNNWICQRCLQVGME 449
CK+ + N+ C RCL+ G+E
Sbjct: 120 CKKHKIKCVGNFPCGRCLKKGLE 142
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,893,275
Number of Sequences: 5004
Number of extensions: 59980
Number of successful extensions: 172
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 163
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 172
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 349251756
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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