Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_P05
         (773 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_1066 + 9431790-9431872,9432333-9432400,9433174-9433314,943...    29   3.1  
11_02_0072 + 8015915-8015934,8016064-8016946,8017474-8018475           28   9.5  

>07_01_1066 +
           9431790-9431872,9432333-9432400,9433174-9433314,
           9434186-9434227,9435915-9436000,9436453-9436515
          Length = 160

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 14/45 (31%), Positives = 23/45 (51%)
 Frame = -1

Query: 182 DHYHRPAHCSSPMYTSIIITVQLFDKFRSYYWSSFVAHNMTIRDL 48
           +H+ RP   +     S I+   L D+ RSY  +    HN TI+++
Sbjct: 51  EHFRRPKLLTESGAISEIVKSNLSDRMRSYLEAGCTHHNETIQNM 95


>11_02_0072 + 8015915-8015934,8016064-8016946,8017474-8018475
          Length = 634

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = +2

Query: 548 IETVVLFCFCCRALRVCYGTLT-IRCLWRL 634
           I  ++   FC    + CYGTL+ I+CL RL
Sbjct: 35  ITIIIQLLFCYMLCQPCYGTLSDIQCLKRL 64


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,833,259
Number of Sequences: 37544
Number of extensions: 324135
Number of successful extensions: 540
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 528
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 540
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2068401984
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)