Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_O24
         (774 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    25   0.89 
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    25   0.89 
AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH trans...    23   2.1  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   3.6  
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    22   4.7  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    21   8.3  

>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 24.6 bits (51), Expect = 0.89
 Identities = 16/56 (28%), Positives = 23/56 (41%)
 Frame = -2

Query: 353  KV*FTYRNNFSSASSLRYFFTNSIIHPIGFSASTAHFFFFIIGAFPVAFSRMSTFN 186
            KV FTY   F   + +  + T   + PIGF          +I  F +   R  TF+
Sbjct: 1259 KVNFTY---FEDKNEIGVYITYLQLEPIGFVFLIFFALLMVIQFFAMMIHRFGTFS 1311


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 24.6 bits (51), Expect = 0.89
 Identities = 16/56 (28%), Positives = 23/56 (41%)
 Frame = -2

Query: 353  KV*FTYRNNFSSASSLRYFFTNSIIHPIGFSASTAHFFFFIIGAFPVAFSRMSTFN 186
            KV FTY   F   + +  + T   + PIGF          +I  F +   R  TF+
Sbjct: 1259 KVNFTY---FEDKNEIGVYITYLQLEPIGFVFLIFFALLMVIQFFAMMIHRFGTFS 1311


>AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH
           transcription factor protein.
          Length = 193

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 9/23 (39%), Positives = 17/23 (73%)
 Frame = +1

Query: 286 EFVKKYLKLEADEKLFLYVNQTF 354
           +FV  Y+K+EADE+  +  +++F
Sbjct: 40  DFVAPYIKVEADEEAPVLKSRSF 62


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 9/33 (27%), Positives = 19/33 (57%)
 Frame = +2

Query: 563 TYYQKNNHATYIQIVIVAL*LSVPLYV*CSLII 661
           TY++ +   T+  +V   +  S+ ++V C L+I
Sbjct: 396 TYFRLSKTKTFCTLVTALVYCSLAIFVLCELLI 428


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 8/23 (34%), Positives = 16/23 (69%)
 Frame = +1

Query: 148 DNKENSDPSKSDKLKVDILLKAT 216
           ++K+N  P+K +K+ + I+ K T
Sbjct: 105 EHKKNPYPTKGEKIMLAIITKMT 127


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -2

Query: 644 TRTRVH*VIMQQ*LFEYRLHDYF 576
           TR+R+H  +    +  Y L DYF
Sbjct: 130 TRSRIHLFVRYVFVTSYLLFDYF 152


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,765
Number of Sequences: 336
Number of extensions: 4120
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20857569
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)