Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_O24
         (774 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0726 + 5319809-5319839,5319918-5319976,5320859-5320927,532...    78   9e-15
04_04_1208 - 31750493-31750587,31750733-31750851,31751425-317514...    43   2e-04
07_03_0566 - 19572410-19572504,19572590-19572708,19573109-195731...    43   3e-04
09_06_0042 - 20443686-20443793,20444083-20444172,20444463-204445...    29   4.1  
03_06_0311 + 33054022-33054118,33056109-33056353,33057058-330573...    29   4.1  

>06_01_0726 +
           5319809-5319839,5319918-5319976,5320859-5320927,
           5321009-5321071,5321360-5321419
          Length = 93

 Score = 77.8 bits (183), Expect = 9e-15
 Identities = 33/91 (36%), Positives = 61/91 (67%)
 Frame = +1

Query: 178 SDKLKVDILLKATGNAPIMKKKKWAVDAEKPIGWIMEFVKKYLKLEADEKLFLYVNQTFA 357
           +++ KV +  ++TGNAP +K+ K+ +   +    I++F+++ +     + +FLYVN  F+
Sbjct: 6   AEQKKVVVHFRSTGNAPQLKQSKFKIGGNEKFLKIIDFLRRQIH---QDTVFLYVNSAFS 62

Query: 358 PSPDQIVRNLYECFGTDGKLVLHYCKSQAWG 450
           P+PD+++ +LY  FG DG+LV++Y  S AWG
Sbjct: 63  PNPDELIIDLYNNFGIDGQLVVNYASSMAWG 93


>04_04_1208 -
           31750493-31750587,31750733-31750851,31751425-31751477,
           31751567-31751622,31752690-31752726
          Length = 119

 Score = 43.2 bits (97), Expect = 2e-04
 Identities = 24/91 (26%), Positives = 44/91 (48%)
 Frame = +1

Query: 178 SDKLKVDILLKATGNAPIMKKKKWAVDAEKPIGWIMEFVKKYLKLEADEKLFLYVNQTFA 357
           SD++ V +      + P + KKK+ V A+  +G  +  V+K +KL  ++ +F++V  T  
Sbjct: 27  SDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNTLP 86

Query: 358 PSPDQIVRNLYECFGTDGKLVLHYCKSQAWG 450
           P+   +     E    DG L + Y     +G
Sbjct: 87  PTAALMSAIYEENKDEDGFLYMTYSGENTFG 117


>07_03_0566 -
           19572410-19572504,19572590-19572708,19573109-19573161,
           19573251-19573306,19574297-19574340,19576767-19576816,
           19577393-19577398,19577675-19578103
          Length = 283

 Score = 42.7 bits (96), Expect = 3e-04
 Identities = 24/91 (26%), Positives = 44/91 (48%)
 Frame = +1

Query: 178 SDKLKVDILLKATGNAPIMKKKKWAVDAEKPIGWIMEFVKKYLKLEADEKLFLYVNQTFA 357
           SD++ V +      + P + KKK+ V A+  +G  +  V+K +KL  ++ +F++V  T  
Sbjct: 191 SDRIPVIVEKADKTDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFVFVKNTLP 250

Query: 358 PSPDQIVRNLYECFGTDGKLVLHYCKSQAWG 450
           P+   +     E    DG L + Y     +G
Sbjct: 251 PTASLMSAIYEENKDEDGFLYMTYSGENTFG 281


>09_06_0042 -
           20443686-20443793,20444083-20444172,20444463-20444570,
           20445144-20445206,20445685-20445795,20445886-20445955,
           20447517-20447539
          Length = 190

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 13/43 (30%), Positives = 26/43 (60%)
 Frame = +3

Query: 468 YKAATNILKKHSIFSFVNLFVFIVYFQSYDLEHITKKIIMQPI 596
           +K  T  LK HSIF  ++ FV++V    +++  + KK +++ +
Sbjct: 67  HKVITIELKWHSIFQLLSNFVYMVLGSGFEVISVGKKKLVRSV 109


>03_06_0311 + 33054022-33054118,33056109-33056353,33057058-33057398,
            33057488-33057538,33057623-33057695,33058229-33058333,
            33060124-33060206,33061209-33061249,33061659-33063120,
            33063368-33064847,33064958-33065122,33065232-33065424,
            33065502-33065613,33065702-33065849,33065951-33066148,
            33066234-33066512,33066612-33066773,33066872-33067090,
            33067481-33067612
          Length = 1861

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 16/51 (31%), Positives = 24/51 (47%)
 Frame = +1

Query: 127  EALRIEVDNKENSDPSKSDKLKVDILLKATGNAPIMKKKKWAVDAEKPIGW 279
            E   I+ D +EN D    +++ V    KAT   P  + +K + D  K I W
Sbjct: 1004 EPKEIDDDQEENEDNDAEEEVNVQDE-KATRTPPSTRSRKSSADTRKEIKW 1053


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,462,008
Number of Sequences: 37544
Number of extensions: 353845
Number of successful extensions: 649
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 637
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 648
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2068401984
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)