Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_O23
         (486 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    23   1.9  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     22   2.6  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   4.5  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    21   4.5  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   5.9  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +3

Query: 57  SKDNTKCLSTSNSNRSPIRLGTGR 128
           +KD  K     N N+ P++ G GR
Sbjct: 478 AKDLEKQRQQCNQNKCPVKRGNGR 501


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -1

Query: 159 SARFSSSLGLVFQFLTLSATCLNC 88
           +ARF+   G  ++F  ++A  LNC
Sbjct: 269 TARFTVEQGYRYRFRVINAGFLNC 292


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = -3

Query: 325 VFGVELLRIFDVLLLGIVL 269
           VFGV LL +F    L IVL
Sbjct: 243 VFGVSLLVLFGNSFLSIVL 261


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = -3

Query: 325 VFGVELLRIFDVLLLGIVL 269
           VFGV LL +F    L IVL
Sbjct: 261 VFGVSLLVLFGNSFLSIVL 279


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -3

Query: 304 RIFDVLLLGIVLGDAFATVP 245
           RI+D +  G+V GD    +P
Sbjct: 314 RIYDAIHSGVVRGDNGQNIP 333


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,847
Number of Sequences: 336
Number of extensions: 2286
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11315916
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)