Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_O17
         (340 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    25   0.21 
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   3.4  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   4.6  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    21   4.6  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   4.6  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    20   6.0  

>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 25.0 bits (52), Expect = 0.21
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +3

Query: 120 DVF*DVYNKNYSNVDEWR 173
           DV  ++YN  Y NV+ WR
Sbjct: 320 DVSSEIYNVEYKNVEFWR 337


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.0 bits (42), Expect = 3.4
 Identities = 9/21 (42%), Positives = 9/21 (42%)
 Frame = -2

Query: 135 HLRRHRSCCVFTSNVQMFTVC 73
           H    R C VFT     FT C
Sbjct: 413 HKEDFRVCLVFTLTGPFFTFC 433


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 20.6 bits (41), Expect = 4.6
 Identities = 6/25 (24%), Positives = 15/25 (60%)
 Frame = +2

Query: 152 FKCRRMETKTVSYSK*WNNKLIKIK 226
           FKC++ +   ++  + WN+  + I+
Sbjct: 202 FKCKQCDFVAITKLEQWNHSKVHIR 226


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 20.6 bits (41), Expect = 4.6
 Identities = 8/34 (23%), Positives = 18/34 (52%)
 Frame = +1

Query: 103 EYTTRTMSSKMSTIRTIQMSTNGDKNCKLFKIME 204
           E  T+T  S  +T+  +       + C++FK+++
Sbjct: 256 ETETKTWGSVFNTVLELMPKHACSEYCRVFKMLQ 289


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 20.6 bits (41), Expect = 4.6
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = +2

Query: 74  QTVNICTFEVNT 109
           QT+ + TF++NT
Sbjct: 22  QTIGLITFDINT 33


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 20.2 bits (40), Expect = 6.0
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -1

Query: 223 YFNQFIIPLF*IAYSFCLHSST 158
           + N F   +F +  SF LH +T
Sbjct: 293 FLNNFYFIIFQVFESFYLHKAT 314


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,882
Number of Sequences: 336
Number of extensions: 838
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6558670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)