Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_O17
         (340 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_1163 + 34615591-34615678,34615866-34616202,34616419-346165...    27   3.8  
01_01_1024 + 8083372-8083758,8083970-8084149,8084261-8084590,808...    26   8.7  

>02_05_1163 +
           34615591-34615678,34615866-34616202,34616419-34616582,
           34616706-34616871,34617255-34617357,34617453-34617578,
           34617718-34617807,34618030-34618308
          Length = 450

 Score = 27.1 bits (57), Expect = 3.8
 Identities = 8/15 (53%), Positives = 14/15 (93%)
 Frame = +3

Query: 132 DVYNKNYSNVDEWRQ 176
           +++N+NYS+ +EWRQ
Sbjct: 124 ELFNQNYSDSEEWRQ 138


>01_01_1024 +
           8083372-8083758,8083970-8084149,8084261-8084590,
           8084679-8084792,8084942-8085682
          Length = 583

 Score = 25.8 bits (54), Expect = 8.7
 Identities = 16/30 (53%), Positives = 18/30 (60%), Gaps = 3/30 (10%)
 Frame = -2

Query: 192 E*LTVFVSIRRHLNSSYCRHL---RRHRSC 112
           E LT+ VS RR L SS  RHL   RR  +C
Sbjct: 58  EDLTINVSRRRLLRSSIARHLFNSRRSNAC 87


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,308,769
Number of Sequences: 37544
Number of extensions: 70375
Number of successful extensions: 112
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 111
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 112
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 470052804
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)