Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_O17
         (340 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC064559-1|AAH64559.1|  781|Homo sapiens chromosome 2 open readi...    33   0.17 
AC005034-1|AAY14973.1|  781|Homo sapiens unknown protein.              33   0.17 
AB026911-1|BAA85386.1|  781|Homo sapiens GCF2 fusion protein pro...    33   0.17 

>BC064559-1|AAH64559.1|  781|Homo sapiens chromosome 2 open reading
           frame 3 protein.
          Length = 781

 Score = 33.5 bits (73), Expect = 0.17
 Identities = 18/44 (40%), Positives = 26/44 (59%)
 Frame = +1

Query: 73  TNREHLYV*GEYTTRTMSSKMSTIRTIQMSTNGDKNCKLFKIME 204
           T+R HL    +Y     SSK STI+ ++ S+N   NCK +K M+
Sbjct: 285 THRSHLREYEKYVQDVKSSK-STIQNLESSSNQALNCKFYKSMK 327


>AC005034-1|AAY14973.1|  781|Homo sapiens unknown protein.
          Length = 781

 Score = 33.5 bits (73), Expect = 0.17
 Identities = 18/44 (40%), Positives = 26/44 (59%)
 Frame = +1

Query: 73  TNREHLYV*GEYTTRTMSSKMSTIRTIQMSTNGDKNCKLFKIME 204
           T+R HL    +Y     SSK STI+ ++ S+N   NCK +K M+
Sbjct: 285 THRSHLREYEKYVQDVKSSK-STIQNLESSSNQALNCKFYKSMK 327


>AB026911-1|BAA85386.1|  781|Homo sapiens GCF2 fusion protein
           protein.
          Length = 781

 Score = 33.5 bits (73), Expect = 0.17
 Identities = 18/44 (40%), Positives = 26/44 (59%)
 Frame = +1

Query: 73  TNREHLYV*GEYTTRTMSSKMSTIRTIQMSTNGDKNCKLFKIME 204
           T+R HL    +Y     SSK STI+ ++ S+N   NCK +K M+
Sbjct: 285 THRSHLREYEKYVQDVKSSK-STIQNLESSSNQALNCKFYKSMK 327


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,512,424
Number of Sequences: 237096
Number of extensions: 416093
Number of successful extensions: 572
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 559
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 572
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1852524224
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)