Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_F_O15
(868 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 44 2e-05
SPBC3D6.04c |mad1||mitotic spindle checkpoint protein Mad1|Schiz... 38 0.002
SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces... 36 0.006
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 32 0.092
SPAC1006.04c |mcp3|mug7|sequence orphan|Schizosaccharomyces pomb... 31 0.16
SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|ch... 31 0.16
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 29 0.65
SPBC146.03c |cut3|smc4, smc4|condensin subunit Cut3|Schizosaccha... 29 0.86
SPAC1783.03 |fta2|sma2|Sim4 and Mal2 associated |Schizosaccharom... 29 1.1
SPBC651.08c |rpc1||DNA-directed RNA polymerase III complex large... 28 1.5
SPCC417.05c |chr2|cfh2|chitin synthase regulatory factor |Schizo... 28 1.5
SPAC1296.01c ||SPAC22F3.01|phosphoacetylglucosamine mutase |Schi... 28 1.5
SPAC6G10.02c |tea3||cell end marker Tea3|Schizosaccharomyces pom... 28 2.0
SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin homolog|Sc... 28 2.0
SPCC338.04 |cid2||caffeine induced death protein Cid2|Schizosacc... 27 2.6
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 27 2.6
SPBC29A10.04 |psm1|smc1|mitotic cohesin complex subunit Psm1 |Sc... 27 3.5
SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr... 27 3.5
SPAC4H3.14c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 27 4.6
SPBC405.05 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 27 4.6
SPAC16E8.13 |||ubiquitin-protein ligase E3 |Schizosaccharomyces ... 27 4.6
SPCC1235.03 |||SMR and CUE domain protein|Schizosaccharomyces po... 27 4.6
SPBC29A10.05 |exo1|mut2|exonuclease I Exo1|Schizosaccharomyces p... 26 6.0
SPCC736.14 |dis1||microtubule-associated protein Dis1 |Schizosac... 26 6.0
SPAC637.04 |||Cargo-transport protein Ypp1 |Schizosaccharomyces ... 26 8.0
SPCC1672.02c |sap1||switch-activating protein Sap1|Schizosacchar... 26 8.0
SPCC188.07 |ccq1||telomere maintenence protein|Schizosaccharomyc... 26 8.0
SPBC13G1.10c |mug81||ATP-dependent RNA helicase Slh1|Schizosacch... 26 8.0
SPAC3A12.02 |||inorganic pyrophosphatase|Schizosaccharomyces pom... 26 8.0
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 44.4 bits (100), Expect = 2e-05
Identities = 60/269 (22%), Positives = 117/269 (43%), Gaps = 18/269 (6%)
Frame = +2
Query: 35 RQVDDQLQMALQQLKTSREQCQQLLKXXEXNEVETLQVIKKNTMLKGQLSQLSIEYNEVL 214
+++++ Q +QLK + + QQL ++E +K + L + + L + ++
Sbjct: 619 QELENNHQTITKQLKDTSSKLQQL-------QLERANFEQKESTLSDENNDLRTKLLKLE 671
Query: 215 ETNKKL---QNVVDGFDQCSGEYVESLQLSAEL----KVKLSQAHDCISNLQLEITNLKA 373
E+NK L Q VD ++ E L+ S E K++ + I NL+ + L+A
Sbjct: 672 ESNKSLIKKQEDVDSLEKNIQTLKEDLRKSEEALRFSKLEAKNLREVIDNLKGKHETLEA 731
Query: 374 QKTQSLYSELIESEPASGTV---ITTSECDIP--TIDLTGGDSDSTHSSRLILSKKN-YK 535
Q+ L+S L +++ + + +T S D+ T ++ DS + S N Y+
Sbjct: 732 QR-NDLHSSLSDAKNTNAILSSELTKSSEDVKRLTANVETLTQDSKAMKQSFTSLVNSYQ 790
Query: 536 RFTKL-----NKFINKTQQLLKSRKSINYMKTICKERNALRTKLNTSLEKLQYVHHNHEL 700
+ L + +N Q +S + +KT C+ L +++KL + H N E
Sbjct: 791 SISNLYHELRDDHVNMQSQNNTLLESESKLKTDCENLTQQNMTLIDNVQKLMHKHVNQES 850
Query: 701 EIEKLTSQINSLKTDLDSVTKNYEYAQKD 787
++ +L L DL ++ + A D
Sbjct: 851 KVSELKEVNGKLSLDLKNLRSSLNVAISD 879
Score = 31.5 bits (68), Expect = 0.16
Identities = 57/264 (21%), Positives = 111/264 (42%), Gaps = 7/264 (2%)
Frame = +2
Query: 2 QFQNDDQRXKARQVDDQLQMALQQLKTSREQCQQLLKXXEXNEVETLQVIKKNTMLKGQL 181
Q QN+ ++ + QQ T + Q+L+ E + ++ + N L L
Sbjct: 807 QSQNNTLLESESKLKTDCENLTQQNMTLIDNVQKLMHKHVNQESKVSELKEVNGKLSLDL 866
Query: 182 SQLSIEYNEVLETNKKLQNVVDGFDQCSGEYVESLQLSAELK--VKLSQAHDCISNLQLE 355
L N + N + ++ + S Y Q SA+L +K +A + + + E
Sbjct: 867 KNLRSSLNVAISDNDQ---ILTQLAELSKNYDSLEQESAQLNSGLKSLEAEKQLLHTENE 923
Query: 356 ITNLKAQK-TQSLYSELIESEPASGTVITTSECDIPTIDLTGGDSDSTHSSRLILSKKNY 532
+++ K T L E +S G +T + +I + ++ S+ I S K+
Sbjct: 924 ELHIRLDKLTGKLKIEESKSSDL-GKKLTARQEEISNLK-----EENMSQSQAITSVKS- 976
Query: 533 KRFTKLNKFINKTQQLLKSRKSI-NYMKTICKERNALRTKLNTSLEKLQYVHHNH---EL 700
KL++ ++K+ +L + + N + + ERNAL ++ L+ N +
Sbjct: 977 ----KLDETLSKSSKLEADIEHLKNKVSEVEVERNALLASNERLMDDLKNNGENIASLQT 1032
Query: 701 EIEKLTSQINSLKTDLDSVTKNYE 772
EIEK ++ + L++ L V+ YE
Sbjct: 1033 EIEKKRAENDDLQSKLSVVSSEYE 1056
>SPBC3D6.04c |mad1||mitotic spindle checkpoint protein
Mad1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 689
Score = 37.9 bits (84), Expect = 0.002
Identities = 60/264 (22%), Positives = 121/264 (45%), Gaps = 20/264 (7%)
Frame = +2
Query: 11 NDDQRXKARQVDDQLQ-----MALQQLKTSREQCQQLLKXXEXNEVE-TLQVIKKNTMLK 172
N+ + K ++ QL+ + ++L+ REQ + K E +E + +LQ+ + T+++
Sbjct: 50 NETKNPKLASLEFQLENLKNDLKRKELEFEREQIELQRKLAEEHEQKNSLQL--RLTLVE 107
Query: 173 GQLSQLSIEYNEVLET--NKKLQNVVDGFDQCSGEYVESLQLSAELKVK---LSQA-HDC 334
QL + S Y + +E N+K V + ++ E +L +++ LS+ H+
Sbjct: 108 KQLEEQSTSYQKEIEEVRNEKEATQVKIHELLDAKWKEIAELKTQIEKNDQALSEKNHEV 167
Query: 335 -ISNLQLEITNLKAQKTQSLYSELIESEPASGTVITTSECDIPTIDLTGG---DSDSTHS 502
+SN L++ + + L+++ E + +E + + + +S S
Sbjct: 168 MVSNQALQMKDTNLTNLEKLFADSREQLETKCKELAAAEQQLQELSVHNQQLEESIKQVS 227
Query: 503 SRLILSKKNYKR---FTKLNKFINKTQQLLKSRKSINYMKTICKE-RNALRTKLNTSLEK 670
S + L K N ++ ++L K ++ ++ S N I KE +N L +KL E
Sbjct: 228 SSIELEKINAEQRLQISELEKLKAAQEERIEKLSSNNRNVEILKEEKNDLESKLYRFEEY 287
Query: 671 LQYVHHNHELEIEKLTSQINSLKT 742
V ELE EK+ +++NS K+
Sbjct: 288 RDKVA-TLELENEKIQTELNSWKS 310
>SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1526
Score = 36.3 bits (80), Expect = 0.006
Identities = 53/260 (20%), Positives = 107/260 (41%)
Frame = +2
Query: 35 RQVDDQLQMALQQLKTSREQCQQLLKXXEXNEVETLQVIKKNTMLKGQLSQLSIEYNEVL 214
R++ + + Q KT ++ ++ L NE L+ +K K +L +EY +VL
Sbjct: 1255 RKITNLMHEYSQLGKTFEDEKRKALIASRDNE--ELRSLKSELESK---RKLEVEYQKVL 1309
Query: 215 ETNKKLQNVVDGFDQCSGEYVESLQLSAELKVKLSQAHDCISNLQLEITNLKAQKTQSLY 394
E K +++ + + + ++L + D L + + K K ++
Sbjct: 1310 EEVKTTRSLRSEVTLLRNKVADHESIRSKLSEVEMKLVDTRKELNSALDSCK--KREAEI 1367
Query: 395 SELIESEPASGTVITTSECDIPTIDLTGGDSDSTHSSRLILSKKNYKRFTKLNKFINKTQ 574
L E P+ E +IP + T + + I + L + + +
Sbjct: 1368 HRLKEHRPSG------KENNIPAVKTTEPVLKNIPQRKTIFDLQQRNANQALYENLKRDY 1421
Query: 575 QLLKSRKSINYMKTICKERNALRTKLNTSLEKLQYVHHNHELEIEKLTSQINSLKTDLDS 754
L K N K + + + A + T + LQ+V+ H +E++ L QINS K + S
Sbjct: 1422 DRLNLEKH-NLEKQVNELKGAEVSPQPTG-QSLQHVNLAHAIELKALKDQINSEKAKMFS 1479
Query: 755 VTKNYEYAQKDICEHISVMD 814
V YE ++++ + I+ ++
Sbjct: 1480 VQVQYEKREQELQKRIASLE 1499
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 32.3 bits (70), Expect = 0.092
Identities = 46/217 (21%), Positives = 95/217 (43%), Gaps = 13/217 (5%)
Frame = +2
Query: 161 TMLKGQLSQLSIEY-NEVLETNKKLQNVVDGFDQCSGEYVESLQLSAELKVKLSQAHDCI 337
T L QL + +Y N+++ ++ + VD + E + LQ + E+ K S+ D
Sbjct: 506 TRLYKQLQDIEEDYENKLMRMEQQWREDVDQLQEYVEEITQELQDTKEVLSKSSKESDDY 565
Query: 338 SNLQLEITNLKAQKTQSLYSELIESEPASGTVITTSECDIPTIDLTGGDSDSTHSSRLIL 517
+ ++ ++ + + E+E + + E + T ++T ++ +
Sbjct: 566 EEVVGKLRTEAEREIEKFEKTIRENEESIS--LFKEEVEKLTDEIT--QLSERYNDKCHE 621
Query: 518 SKKNYKRFTKLNKFINKTQQLLKSRKS--INYMKTICKERNALR-----TKLNTSLEKLQ 676
+ KR L + NK ++ S+ S + +K E ++LR K +L++ +
Sbjct: 622 FDELQKRLQTLEEENNKAKEDSTSKTSNLLEQLKMTEAEVDSLRKENEENKQVIALKESE 681
Query: 677 YVHHNHEL-----EIEKLTSQINSLKTDLDSVTKNYE 772
V N +IE L Q++ LKT+++SVT + E
Sbjct: 682 LVKSNDNKLLLNEQIESLNDQLSQLKTEMESVTTSKE 718
>SPAC1006.04c |mcp3|mug7|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 952
Score = 31.5 bits (68), Expect = 0.16
Identities = 15/61 (24%), Positives = 34/61 (55%)
Frame = +2
Query: 605 YMKTICKERNALRTKLNTSLEKLQYVHHNHELEIEKLTSQINSLKTDLDSVTKNYEYAQK 784
++K+ +++ KL+ SLE L +++ + EI + +++NS+ + L + E A K
Sbjct: 519 FLKSQIRDQELTIEKLHDSLETLSQTNNSLQCEISEKNAELNSVNSKLSEGRAHLETANK 578
Query: 785 D 787
+
Sbjct: 579 E 579
>SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 750
Score = 31.5 bits (68), Expect = 0.16
Identities = 48/258 (18%), Positives = 110/258 (42%), Gaps = 1/258 (0%)
Frame = +2
Query: 2 QFQNDDQRXKARQVDDQLQMALQQLKTSREQCQQLLKXXEXNEVETLQVIKKNTMLKGQL 181
+F+ + + K+R D L + +L+ ++C++ L E + ET++ + + K L
Sbjct: 366 KFKQNSESLKSRV--DNLNDYITKLQNEIDECRRNLLWAE-SSCETIREENQKNIKK--L 420
Query: 182 SQLSIEYNEVLETNKKLQNVVDGFDQCSGEYVESLQLSAELKVKLSQAHDCISNLQLEIT 361
+ + +L++ ++Q +D + + + + + S + V S+A +
Sbjct: 421 NDAESLKSRLLQSRTQMQTELDSYITSNSQLKDEIT-SLKQTVSESEAERKRLFSSAQEK 479
Query: 362 NLKAQKTQSLYSELIESEPASGTVITTSECDIPTIDLTGGDSDSTHSSRLILSK-KNYKR 538
L+ ++T + + L E + E DL + + T +L+ + ++ ++
Sbjct: 480 QLQMKETVNKLTSLQEQNNEFDRQLKEQE-----EDLQNKEEELTELRKLLREQTQDSQK 534
Query: 539 FTKLNKFINKTQQLLKSRKSINYMKTICKERNALRTKLNTSLEKLQYVHHNHELEIEKLT 718
L + + +Q LK N+ + + L +SL Q + + +I +L
Sbjct: 535 LRLLVEQLELERQDLKQAGE-NHYSNLSSDYETQIKSLESSLTNSQAECVSFQEKINELN 593
Query: 719 SQINSLKTDLDSVTKNYE 772
SQI+ LK L+ K Y+
Sbjct: 594 SQIDELKLKLNEANKKYQ 611
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 29.5 bits (63), Expect = 0.65
Identities = 26/112 (23%), Positives = 48/112 (42%), Gaps = 2/112 (1%)
Frame = +2
Query: 488 DSTHSSRLILSK--KNYKRFTKLNKFINKTQQLLKSRKSINYMKTICKERNALRTKLNTS 661
D +S RL+ S + N+ I++ + L+ S N K + E N ++
Sbjct: 449 DDNNSLRLMTSSLGNQIESLRTQNREIDEEKNHLRLLASKNSDKALA-ETNIRLQEVTKE 507
Query: 662 LEKLQYVHHNHELEIEKLTSQINSLKTDLDSVTKNYEYAQKDICEHISVMDI 817
LE L+ + N EI L + L +DS+TK + ++ + I ++
Sbjct: 508 LETLRMKNSNDLNEIHDLREENEGLTLKIDSITKEKDRLINELEQRIKSYEV 559
>SPBC146.03c |cut3|smc4, smc4|condensin subunit
Cut3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1324
Score = 29.1 bits (62), Expect = 0.86
Identities = 19/71 (26%), Positives = 33/71 (46%)
Frame = +2
Query: 584 KSRKSINYMKTICKERNALRTKLNTSLEKLQYVHHNHELEIEKLTSQINSLKTDLDSVTK 763
K S N + + K+ N L K N + Y N + ++ L +NSL+ L + +
Sbjct: 335 KLEDSKNSVLSFLKDENELFMKQNQLYRTILYETRNKKTLVQNL---LNSLEGKLQAHLE 391
Query: 764 NYEYAQKDICE 796
+E ++DI E
Sbjct: 392 KFEQTERDISE 402
>SPAC1783.03 |fta2|sma2|Sim4 and Mal2 associated
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 351
Score = 28.7 bits (61), Expect = 1.1
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +2
Query: 647 KLNTSLEKLQYVHHNHELEIEKLTSQINSLKTDLD 751
KLN+S+ +++ H E E EK+ +SLK D++
Sbjct: 149 KLNSSISSIRFTQHEFEAESEKIIH--HSLKGDIE 181
>SPBC651.08c |rpc1||DNA-directed RNA polymerase III complex large
subunit Rpc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1405
Score = 28.3 bits (60), Expect = 1.5
Identities = 19/50 (38%), Positives = 30/50 (60%)
Frame = +2
Query: 278 ESLQLSAELKVKLSQAHDCISNLQLEITNLKAQKTQSLYSELIESEPASG 427
E+L+ ELK+ LS+AHD ++ L++ NL Q T + EL+ +P G
Sbjct: 195 EALKTIPELKMHLSKAHDDLN--PLKVLNLFKQIT-PVDCELLGMDPEHG 241
>SPCC417.05c |chr2|cfh2|chitin synthase regulatory factor
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 512
Score = 28.3 bits (60), Expect = 1.5
Identities = 13/58 (22%), Positives = 30/58 (51%)
Frame = +2
Query: 482 DSDSTHSSRLILSKKNYKRFTKLNKFINKTQQLLKSRKSINYMKTICKERNALRTKLN 655
+ S+ +R +++K + F L F+++ +++ Y+ +C ALRT++N
Sbjct: 188 EKSSSRRNREYVARKKEEAFDYLTSFVSQGNSFFGYSEAL-YLLAVCYGTGALRTEIN 244
>SPAC1296.01c ||SPAC22F3.01|phosphoacetylglucosamine mutase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 542
Score = 28.3 bits (60), Expect = 1.5
Identities = 22/100 (22%), Positives = 42/100 (42%), Gaps = 3/100 (3%)
Frame = +2
Query: 146 VIKKNTMLKGQLSQLSIEYNEVLETNKKLQNVVDGFDQCSGEYVE-SLQLSAEL--KVKL 316
++KK ++ G +++ + Y+ + Q V+DG C +Y L + +L VK
Sbjct: 123 ILKKAKIIPGSEARVFVGYDSRSTSEILAQAVIDGIVVCKAKYENFGLLTTPQLHYMVKA 182
Query: 317 SQAHDCISNLQLEITNLKAQKTQSLYSELIESEPASGTVI 436
SQ + + +K Y L+ + GTV+
Sbjct: 183 SQTYGTPDAIGEPTERGYFEKLSKAYQSLMTGKKIKGTVL 222
>SPAC6G10.02c |tea3||cell end marker Tea3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1125
Score = 27.9 bits (59), Expect = 2.0
Identities = 15/61 (24%), Positives = 33/61 (54%)
Frame = +2
Query: 599 INYMKTICKERNALRTKLNTSLEKLQYVHHNHELEIEKLTSQINSLKTDLDSVTKNYEYA 778
+++ ++ +ER+ T L LQY + N +E+E L S+ L++ L+ + +Y+
Sbjct: 789 LSFEDSLRRERDEKST-LQQKCLNLQYEYENVRIELENLQSRALELESALEQSVSDAKYS 847
Query: 779 Q 781
+
Sbjct: 848 K 848
>SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 997
Score = 27.9 bits (59), Expect = 2.0
Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +2
Query: 560 INKTQQLLKSRKSINYMKTICKERNALRTKLNTSLEKLQYVHHNHELE-IEKLTSQINSL 736
+ ++++ IN K K + + +KLQ NHELE IEK+ ++
Sbjct: 740 VGNSEKVTFQEDDINSPKLQSKNNQTVEAVNTETSDKLQEKEANHELENIEKIEEKL--- 796
Query: 737 KTDLDSVTKNYEYAQKDI 790
T++D V+ + + ++I
Sbjct: 797 -TEVDKVSLSDAFPDQEI 813
Score = 25.8 bits (54), Expect = 8.0
Identities = 32/146 (21%), Positives = 55/146 (37%), Gaps = 8/146 (5%)
Frame = +2
Query: 269 EYVESLQLSAELKVKLSQAHDCISNLQLEITNLKAQKTQSLYSELIESEPASGTVITTSE 448
++ E LQ L +H+ + + T + K + L ++ +ESE + + +
Sbjct: 540 KFQEVLQSKNILVSSTEDSHEPVKVTEDSQTAIHVSKFEDLENKSMESEQSLQLLSESEN 599
Query: 449 CDIPTIDLTG----GDSDSTHSSRLILSKKNYKRFTKLN----KFINKTQQLLKSRKSIN 604
D P IDL D+ S L K TK + FI K + +
Sbjct: 600 DDKPLIDLIPLLAIKRKDNLVSGVLEKGKSTSTSKTKFDTSIVDFIEKPKTEISEVLPEE 659
Query: 605 YMKTICKERNALRTKLNTSLEKLQYV 682
K IC E +R ++ + K + V
Sbjct: 660 KRKAICDESQTVRVSIDRGVTKTRDV 685
>SPCC338.04 |cid2||caffeine induced death protein
Cid2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 167
Score = 27.5 bits (58), Expect = 2.6
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 11/64 (17%)
Frame = +2
Query: 29 KARQVDDQLQMALQQLK----------TSREQCQQLLKXXEXNEVETLQVIKK-NTMLKG 175
KAR++DD +Q++L K T E+CQ + K + Q +K+ T+++
Sbjct: 21 KARKIDDTIQLSLNSAKWEYPEGKVHETQEERCQNVKKKLFEGWLSRDQFLKECQTIVRS 80
Query: 176 QLSQ 187
QL Q
Sbjct: 81 QLDQ 84
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 27.5 bits (58), Expect = 2.6
Identities = 25/131 (19%), Positives = 58/131 (44%), Gaps = 8/131 (6%)
Frame = +2
Query: 428 TVITTSECDIPTIDLTGGDSDSTHSSRLILSKKNYKRFTKLNKFINKTQQLLKSRK---- 595
T I + + D + D + HS+ K+ + + L K + + LLKSR+
Sbjct: 282 TTINDLKSQMTITDESSEDLEKLHSNFAEKVKEEQELYKSLEKKRSDLESLLKSRRELLE 341
Query: 596 ----SINYMKTICKERNALRTKLNTSLEKLQYVHHNHELEIEKLTSQINSLKTDLDSVTK 763
+ ++ + L+ K +T + ++ + ++ +E+ E + ++++ + V K
Sbjct: 342 KLTGDLGKIQGEIESLEKLKVKKSTMINEIVHRYNINEINEEGIMTEVSKYAS---LVNK 398
Query: 764 NYEYAQKDICE 796
NYE + + E
Sbjct: 399 NYEISSGKLKE 409
>SPBC29A10.04 |psm1|smc1|mitotic cohesin complex subunit Psm1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1233
Score = 27.1 bits (57), Expect = 3.5
Identities = 34/158 (21%), Positives = 70/158 (44%), Gaps = 1/158 (0%)
Frame = +2
Query: 299 ELKVKLSQAHDCISNLQLEITN-LKAQKTQSLYSELIESEPASGTVITTSECDIPTIDLT 475
E +K Q H +S L++E+ N +K++ + E +E + SG DI T D
Sbjct: 743 ESLIKEKQPH--LSELEMELRNFVKSRDELQIQVEKVEEKIFSGFCKRIGISDIHTYDE- 799
Query: 476 GGDSDSTHSSRLILSKKNYKRFTKLNKFINKTQQLLKSRKSINYMKTICKERNALRTKLN 655
+ + + FT+ K + LL++R I++ K + +++
Sbjct: 800 -------------IHRTFTQSFTQKQLEFTKQKSLLENR--ISFEKQRVSDTRLRLERMH 844
Query: 656 TSLEKLQYVHHNHELEIEKLTSQINSLKTDLDSVTKNY 769
+EK Q N+E E L S++ + + +L+ + +++
Sbjct: 845 KFIEKDQESIDNYEQNREALESEVATAEAELELLKEDF 882
>SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 633
Score = 27.1 bits (57), Expect = 3.5
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +2
Query: 344 LQLEITNLKAQKTQSLYSELIESEPASGTVITTSECD 454
L+ E+ NL+ K Y +L+E+E IT EC+
Sbjct: 143 LEREVENLR--KELDKYKDLVETEAEKRAAITKEECE 177
>SPAC4H3.14c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 345
Score = 26.6 bits (56), Expect = 4.6
Identities = 32/142 (22%), Positives = 60/142 (42%), Gaps = 11/142 (7%)
Frame = +2
Query: 17 DQRXKARQVDDQLQMALQ-QLKTSREQCQQLLKXXEXNEVETLQVIKKNTMLKGQLSQLS 193
+++ +A + + ++Q + Q+ E+ QQL E E ET + + + Q L
Sbjct: 128 NRKQRAAKEEQKIQEEFERQITDLLEEQQQLKLEIERLEAETERANSETEQYEKQKEALE 187
Query: 194 IEY----NEVLETNKKLQNVVDGFDQCSGEYVESL-QLSAELKVKLSQAHDCISNLQLEI 358
EY NE L+ + +L + E +L + ++ K+ D + N E
Sbjct: 188 EEYEELRNECLKHDPQLDAEIRTLQDTFEEVERTLTKQVSDAKIADKPLKDSMFNSNSEK 247
Query: 359 TNL-----KAQKTQSLYSELIE 409
+ KA+K +YSE I+
Sbjct: 248 EKIMHALEKAEKDADIYSEFIQ 269
>SPBC405.05 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 143
Score = 26.6 bits (56), Expect = 4.6
Identities = 19/79 (24%), Positives = 41/79 (51%)
Frame = +2
Query: 11 NDDQRXKARQVDDQLQMALQQLKTSREQCQQLLKXXEXNEVETLQVIKKNTMLKGQLSQL 190
+D A + +D+ + L++ + + C + + ++ Q +KNT+L+ QLS L
Sbjct: 49 SDSLNTIASENNDENVINLEEFRQLKRNCDLYQRNLQKLQLLFKQQSQKNTLLEKQLS-L 107
Query: 191 SIEYNEVLETNKKLQNVVD 247
E N+ E +K+++ + D
Sbjct: 108 QTELNQ--EKDKRVKILQD 124
>SPAC16E8.13 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 547
Score = 26.6 bits (56), Expect = 4.6
Identities = 20/98 (20%), Positives = 47/98 (47%)
Frame = +2
Query: 14 DDQRXKARQVDDQLQMALQQLKTSREQCQQLLKXXEXNEVETLQVIKKNTMLKGQLSQLS 193
D K ++ DD+L+ QL+ + ++ E V + K+NT Q+ +
Sbjct: 416 DISESKLKKRDDKLKRVSSQLEHLKHNYEEEKSMNENLLVRIQTLEKQNTTKSDQIVSMQ 475
Query: 194 IEYNEVLETNKKLQNVVDGFDQCSGEYVESLQLSAELK 307
+ N++ N++L++++ F + + ++ + S EL+
Sbjct: 476 FQINDL---NEQLRDLM--FTISASQEIQKMGQSEELQ 508
>SPCC1235.03 |||SMR and CUE domain protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 399
Score = 26.6 bits (56), Expect = 4.6
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +2
Query: 572 QQLLKSRKSINYMKTICK-ERNALRTKLNTSLEKLQYVHHNHELEIEKLTSQIN 730
Q+ K++K+ N K + K + N + L+ V N+ L IEKLTS +N
Sbjct: 58 QRKKKTKKATNSRKPLSKFQSNTEEVNEDPILKPSLSVWENNRLLIEKLTSILN 111
>SPBC29A10.05 |exo1|mut2|exonuclease I Exo1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 571
Score = 26.2 bits (55), Expect = 6.0
Identities = 19/85 (22%), Positives = 40/85 (47%), Gaps = 2/85 (2%)
Frame = +2
Query: 464 IDLTGGDSDSTHSSRLILSKKNYKRFTKLNKFINKTQQLLKSRKSINYMKTICKERNALR 643
ID+ G S+ + + + FTK I+K + + K+ S +MK+I + +
Sbjct: 319 IDIAEGRSNPITKCAFDIKDSSMQSFTKTTITISKRKGISKTDISNFFMKSIPPSKRPTK 378
Query: 644 TK--LNTSLEKLQYVHHNHELEIEK 712
+ ++ + K+Q H +++ EK
Sbjct: 379 STSLIDVTNVKVQRTHLANDISSEK 403
>SPCC736.14 |dis1||microtubule-associated protein Dis1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 882
Score = 26.2 bits (55), Expect = 6.0
Identities = 17/63 (26%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Frame = +2
Query: 206 EVLETNKKLQNVVDGFDQCSGEY----VESLQL-SAELKVKLSQAHDCISNLQLEITNLK 370
++L K ++ V + D E + LQ+ +AE+K ++ + IS ++EIT+L+
Sbjct: 695 DLLREEKAIRQVQEAEDALERERLFREINDLQIQNAEMKEQVYEKESTISQKEVEITSLR 754
Query: 371 AQK 379
+K
Sbjct: 755 NEK 757
>SPAC637.04 |||Cargo-transport protein Ypp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 862
Score = 25.8 bits (54), Expect = 8.0
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +3
Query: 231 YKML*TASISAAVSMLSRSNSQLN*KSNFLRHMIVSLIY 347
Y + S+SA S L R+N S F H V+L+Y
Sbjct: 200 YSLYAQMSVSACSSQLERANILTTCLSYFTEHKSVNLLY 238
>SPCC1672.02c |sap1||switch-activating protein
Sap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 254
Score = 25.8 bits (54), Expect = 8.0
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +2
Query: 176 QLSQLSIEYNEVLETNKKLQNVVDGFDQCS 265
+L Q++ + +EVL NK+LQ ++D D S
Sbjct: 180 KLMQVNAKMDEVLAENKRLQQLLDHNDLLS 209
>SPCC188.07 |ccq1||telomere maintenence protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 735
Score = 25.8 bits (54), Expect = 8.0
Identities = 15/75 (20%), Positives = 33/75 (44%)
Frame = +2
Query: 2 QFQNDDQRXKARQVDDQLQMALQQLKTSREQCQQLLKXXEXNEVETLQVIKKNTMLKGQL 181
+F N+D + K + +++ Q LKT +E + + + K+ L+ +
Sbjct: 616 EFSNEDLQGKLIEANEKNYKLTQLLKTQKEDADFITNQYQNASTFAAEQSKEVAKLQAEC 675
Query: 182 SQLSIEYNEVLETNK 226
+L ++V+E K
Sbjct: 676 KRLQAINSKVMEEVK 690
>SPBC13G1.10c |mug81||ATP-dependent RNA helicase
Slh1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1935
Score = 25.8 bits (54), Expect = 8.0
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +2
Query: 176 QLSQLSIEYNEVLETNKKLQNVVDGFDQCSGEY 274
+L LS++ +E+L+TN L N D D + E+
Sbjct: 35 ELGALSLKVDEILKTNYNLINPEDVTDSDNNEF 67
>SPAC3A12.02 |||inorganic pyrophosphatase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 286
Score = 25.8 bits (54), Expect = 8.0
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = +2
Query: 659 SLEKLQYVH--HNHELEIEKLTSQINSLKTDLDSVTKNY 769
S ++ QY+ HN + L ++INSLK ++ NY
Sbjct: 236 SRDRKQYIKNFHNESVNNVDLINKINSLKEEVSQNVSNY 274
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,299,056
Number of Sequences: 5004
Number of extensions: 64767
Number of successful extensions: 262
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 233
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 261
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 432473040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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