Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_O15
         (868 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             27   0.30 
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    25   1.2  
DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholi...    24   2.1  
L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.          23   3.6  
DQ855483-1|ABH88170.1|  117|Apis mellifera chemosensory protein ...    23   3.6  
AJ973398-1|CAJ01445.1|  117|Apis mellifera hypothetical protein ...    23   3.6  
AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex det...    23   4.8  
AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding pr...    22   6.4  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 26.6 bits (56), Expect = 0.30
 Identities = 25/98 (25%), Positives = 41/98 (41%)
 Frame = +2

Query: 8    QNDDQRXKARQVDDQLQMALQQLKTSREQCQQLLKXXEXNEVETLQVIKKNTMLKGQLSQ 187
            Q   Q+ + +Q   Q Q   QQ +  + Q QQ  +  +  + +  Q  K+   + G + Q
Sbjct: 1502 QQQPQQQQQQQQQQQPQQQSQQPQQQQPQPQQQQQQQQQQQPQQQQ--KEYGAVSGLVVQ 1559

Query: 188  LSIEYNEVLETNKKLQNVVDGFDQCSGEYVESLQLSAE 301
            L   YN     + +  N      Q SGE V  ++ S E
Sbjct: 1560 LQRGYNSGNNRSGEQANSQQQQQQQSGEPVIGMEDSVE 1597


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +2

Query: 194 IEYNEVLETNKKLQNVVDGFD 256
           +EY  VL  + ++Q V+ GFD
Sbjct: 371 LEYEYVLAVSNRIQKVIYGFD 391


>DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholine
           receptor alpha3subunit protein.
          Length = 566

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 15/43 (34%), Positives = 24/43 (55%)
 Frame = +2

Query: 290 LSAELKVKLSQAHDCISNLQLEITNLKAQKTQSLYSELIESEP 418
           L+ ++K+KLSQ  D     Q+  TNL  +  QS Y   ++ +P
Sbjct: 50  LTVKIKLKLSQLIDVNLKNQIMTTNLWVE--QSWYDYKLKWDP 90


>L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.
          Length = 149

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 13/49 (26%), Positives = 25/49 (51%)
 Frame = +2

Query: 503 SRLILSKKNYKRFTKLNKFINKTQQLLKSRKSINYMKTICKERNALRTK 649
           +R I S    ++ TKLN  + + +  L +RKS+ +     +   +L T+
Sbjct: 86  NRTINSVVYIEQLTKLNNAVEEKRPELTNRKSVVFHHDNARPHTSLVTR 134


>DQ855483-1|ABH88170.1|  117|Apis mellifera chemosensory protein 2
           protein.
          Length = 117

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 20/76 (26%), Positives = 32/76 (42%)
 Frame = +2

Query: 14  DDQRXKARQVDDQLQMALQQLKTSREQCQQLLKXXEXNEVETLQVIKKNTMLKGQLSQLS 193
           + Q  ++R  D+QL MAL   +  R Q +  L     + V          +L+G   Q S
Sbjct: 25  EGQSGRSRVSDEQLNMALSDQRYLRRQLKCALGEAPCDPVGRRLKSLAPLVLRGACPQCS 84

Query: 194 IEYNEVLETNKKLQNV 241
            E  E  +  K L ++
Sbjct: 85  PE--ETRQIKKVLSHI 98


>AJ973398-1|CAJ01445.1|  117|Apis mellifera hypothetical protein
           protein.
          Length = 117

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 20/76 (26%), Positives = 32/76 (42%)
 Frame = +2

Query: 14  DDQRXKARQVDDQLQMALQQLKTSREQCQQLLKXXEXNEVETLQVIKKNTMLKGQLSQLS 193
           + Q  ++R  D+QL MAL   +  R Q +  L     + V          +L+G   Q S
Sbjct: 25  EGQSGRSRVSDEQLNMALSDQRYLRRQLKCALGEAPCDPVGRRLKSLAPLVLRGACPQCS 84

Query: 194 IEYNEVLETNKKLQNV 241
            E  E  +  K L ++
Sbjct: 85  PE--ETRQIKKVLSHI 98


>AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex
           determiner protein.
          Length = 428

 Score = 22.6 bits (46), Expect = 4.8
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = +3

Query: 30  KLVKLMTNFKWLFNN*KHHGNSVNN 104
           K +    N+K+ +NN  ++ N+ NN
Sbjct: 321 KTIHNNNNYKYNYNNNNYNNNNYNN 345


>AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding
           protein protein.
          Length = 135

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +2

Query: 704 IEKLTSQINSLKTDLDSVTKNYEYAQKDICEHIS 805
           IE  T +  +   D   VT+ YE++  ++  HIS
Sbjct: 87  IEGNTFKTETQVNDSLKVTRLYEFSDNELLVHIS 120


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 220,383
Number of Sequences: 438
Number of extensions: 4547
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28038087
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)