Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_O12
         (317 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7RJL1 Cluster: Putative uncharacterized protein PY0324...    34   0.70 
UniRef50_A4BRR5 Cluster: KpsS protein; n=1; Nitrococcus mobilis ...    32   2.1  
UniRef50_A7SA89 Cluster: Predicted protein; n=1; Nematostella ve...    32   2.8  
UniRef50_A1RG24 Cluster: Putative uncharacterized protein precur...    31   6.6  
UniRef50_Q22MX1 Cluster: Putative uncharacterized protein; n=2; ...    31   6.6  

>UniRef50_Q7RJL1 Cluster: Putative uncharacterized protein PY03248;
           n=1; Plasmodium yoelii yoelii|Rep: Putative
           uncharacterized protein PY03248 - Plasmodium yoelii
           yoelii
          Length = 760

 Score = 33.9 bits (74), Expect = 0.70
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = -1

Query: 236 SYLFLIKKNIFKFQFNYNQMKRQPTDQSRNQYLFFYL 126
           +Y  + KKN++ F  NYN + R  T+   N  +FF L
Sbjct: 694 NYTTIFKKNLYHFYNNYNTILRNKTNFENNAMIFFLL 730


>UniRef50_A4BRR5 Cluster: KpsS protein; n=1; Nitrococcus mobilis
           Nb-231|Rep: KpsS protein - Nitrococcus mobilis Nb-231
          Length = 466

 Score = 32.3 bits (70), Expect = 2.1
 Identities = 12/34 (35%), Positives = 22/34 (64%)
 Frame = -3

Query: 213 KYF*IPIQLQSDEKTTDRSESESVSIFLPELVGS 112
           KY+ +P+Q+  D++ T  S   S+  F+ E++GS
Sbjct: 216 KYYLVPLQVHCDKQITHHSRYASIEDFIAEVIGS 249


>UniRef50_A7SA89 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 1276

 Score = 31.9 bits (69), Expect = 2.8
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = -1

Query: 206 FKFQFNYNQMKRQPTDQSRNQYLFFYLNLLE 114
           + F F+Y  +  QP  Q++  YL +YLNLL+
Sbjct: 326 YPFTFSYPDVNGQPYQQAKALYLDYYLNLLK 356


>UniRef50_A1RG24 Cluster: Putative uncharacterized protein
          precursor; n=6; Shewanella|Rep: Putative
          uncharacterized protein precursor - Shewanella sp.
          (strain W3-18-1)
          Length = 331

 Score = 30.7 bits (66), Expect = 6.6
 Identities = 11/16 (68%), Positives = 14/16 (87%)
 Frame = +3

Query: 48 RYRKFTLALLCYFIVN 95
          RY KFT+ALLC+F+ N
Sbjct: 2  RYSKFTIALLCFFVSN 17


>UniRef50_Q22MX1 Cluster: Putative uncharacterized protein; n=2;
            Alveolata|Rep: Putative uncharacterized protein -
            Tetrahymena thermophila SB210
          Length = 2179

 Score = 30.7 bits (66), Expect = 6.6
 Identities = 15/50 (30%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
 Frame = -1

Query: 242  VISYLFLIKKNI-FKFQFNYNQMKRQPTDQSRNQYLFFYLNLLEAE*SWF 96
            ++SY+FL+ ++I +KF+   +  K +  DQ  N++L  Y     ++ S+F
Sbjct: 2032 ILSYIFLVAQSILWKFRKRQSLKKGEDQDQFENEFLTRYAQNSNSQSSYF 2081


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 205,374,444
Number of Sequences: 1657284
Number of extensions: 3124533
Number of successful extensions: 6356
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6259
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6354
length of database: 575,637,011
effective HSP length: 82
effective length of database: 439,739,723
effective search space used: 10114013629
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)