Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_O12
         (317 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    21   4.7  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    20   6.3  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          20   6.3  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      20   6.3  
AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex det...    20   6.3  

>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 20.6 bits (41), Expect = 4.7
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -3

Query: 162 RSESESVSIFLPELVGSGV 106
           RS   S+ + LP+LVG  +
Sbjct: 225 RSIGNSLMVILPDLVGKKI 243


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
            protein.
          Length = 1010

 Score = 20.2 bits (40), Expect = 6.3
 Identities = 5/15 (33%), Positives = 11/15 (73%)
 Frame = +2

Query: 44   ISIPKIYASAIVLFH 88
            +S+P I+   +++FH
Sbjct: 986  LSVPNIFVKDVLVFH 1000


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 20.2 bits (40), Expect = 6.3
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +1

Query: 94  INHDYSASNK 123
           +NHDY+  NK
Sbjct: 210 LNHDYNLENK 219


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 20.2 bits (40), Expect = 6.3
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +1

Query: 94  INHDYSASNK 123
           +NHDY+  NK
Sbjct: 210 LNHDYNLENK 219


>AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex
           determiner protein.
          Length = 426

 Score = 20.2 bits (40), Expect = 6.3
 Identities = 8/28 (28%), Positives = 12/28 (42%)
 Frame = -1

Query: 191 NYNQMKRQPTDQSRNQYLFFYLNLLEAE 108
           NYN       + + N Y   Y N++  E
Sbjct: 333 NYNNNYNNYNNNNYNNYKKLYYNIINIE 360


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,716
Number of Sequences: 438
Number of extensions: 930
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  6844365
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)