Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_O11
         (837 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U00065-7|AAL02474.1| 1090|Caenorhabditis elegans Hypothetical pr...    28   7.2  
U00065-6|AAL02472.1| 1051|Caenorhabditis elegans Hypothetical pr...    28   7.2  
AF016415-7|AAW88412.1|  296|Caenorhabditis elegans Serpentine re...    28   7.2  
Z70780-6|CAA94823.1|  614|Caenorhabditis elegans Hypothetical pr...    28   9.5  

>U00065-7|AAL02474.1| 1090|Caenorhabditis elegans Hypothetical
           protein D1044.2c protein.
          Length = 1090

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +2

Query: 98  YVCHCSEGAASPVS 139
           Y CHCSEG   P+S
Sbjct: 331 YCCHCSEGTCHPIS 344


>U00065-6|AAL02472.1| 1051|Caenorhabditis elegans Hypothetical
           protein D1044.2a protein.
          Length = 1051

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +2

Query: 98  YVCHCSEGAASPVS 139
           Y CHCSEG   P+S
Sbjct: 331 YCCHCSEGTCHPIS 344


>AF016415-7|AAW88412.1|  296|Caenorhabditis elegans Serpentine
           receptor, class bc (class b-like) protein 33 protein.
          Length = 296

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 4/47 (8%)
 Frame = +3

Query: 384 FYTLPR--IFFNEFYDSIIASVRLFCFNVNGLPT--ISNVLRYELYD 512
           F+T+ +  IFF+    SI+ S++LF +N NG  +  IS   R  L D
Sbjct: 172 FWTIHKSIIFFSILVFSILISIKLFIWNTNGQSSNQISKANRLALLD 218


>Z70780-6|CAA94823.1|  614|Caenorhabditis elegans Hypothetical
           protein F46B6.7 protein.
          Length = 614

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 15/56 (26%), Positives = 25/56 (44%)
 Frame = -1

Query: 585 FFIHSLHCDATREVVYSTKNS*HLHHKAHNEEHSRLSAVH*H*NKINVHLQLLNHR 418
           + IH L+  +   +V+ T+   HL  K H  E      +    N +  H++  NHR
Sbjct: 326 YMIHHLNLGSPDNLVFVTEYIEHLKEKLHRNECIYCEKIFPDRNTLMDHMRKRNHR 381


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,478,548
Number of Sequences: 27780
Number of extensions: 367311
Number of successful extensions: 688
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 676
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 688
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2066533546
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)