Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_F_O03
(795 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY069316-1|AAL39461.1| 303|Drosophila melanogaster LD03052p pro... 97 3e-20
AE014298-2564|AAO41692.1| 303|Drosophila melanogaster CG5445-PD... 97 3e-20
AE014298-2563|AAN09441.1| 303|Drosophila melanogaster CG5445-PC... 97 3e-20
AE014298-2562|AAF48724.1| 303|Drosophila melanogaster CG5445-PB... 97 3e-20
AE014298-2561|AAF48723.1| 303|Drosophila melanogaster CG5445-PA... 97 3e-20
>AY069316-1|AAL39461.1| 303|Drosophila melanogaster LD03052p
protein.
Length = 303
Score = 96.7 bits (230), Expect = 3e-20
Identities = 58/163 (35%), Positives = 83/163 (50%), Gaps = 1/163 (0%)
Frame = +1
Query: 298 EIDQNLLLQFSCMNTTDREELIKQMQKLLGPSLNYNTASFFLDMSNWNLQAAICCYLDYT 477
+ID LL QFSCM TTD E+LI Q Q L+ +N +A F+L+MSNW+LQ A+ CYLD+
Sbjct: 113 DIDSLLLQQFSCMGTTDHEDLISQFQSLMNNQMNRESARFYLEMSNWSLQTAVGCYLDFC 172
Query: 478 S-PKLPSMSVKASEGPTGSLEPGARFDQNWSIVNTGTEQWPGCCRLIQAGGEPLGATPVY 654
S LPSM + + Q + + N GTE+WP C L P+ +
Sbjct: 173 SLQSLPSMKIVQEKQVNAQ-------QQAFQLQNDGTERWPNNCYLT----SPIQTQRIN 221
Query: 655 LPPLPVGHSTTVTLKLVAPSTSGTHKSFFHLVTDKGEQIGDTL 783
+P L G + + ++ P+ T + L T G GD +
Sbjct: 222 VPALRPGETCDILADMM-PTQPPT---MWRLCTSNGWYFGDAI 260
>AE014298-2564|AAO41692.1| 303|Drosophila melanogaster CG5445-PD,
isoform D protein.
Length = 303
Score = 96.7 bits (230), Expect = 3e-20
Identities = 58/163 (35%), Positives = 83/163 (50%), Gaps = 1/163 (0%)
Frame = +1
Query: 298 EIDQNLLLQFSCMNTTDREELIKQMQKLLGPSLNYNTASFFLDMSNWNLQAAICCYLDYT 477
+ID LL QFSCM TTD E+LI Q Q L+ +N +A F+L+MSNW+LQ A+ CYLD+
Sbjct: 113 DIDSLLLQQFSCMGTTDHEDLISQFQSLMNNQMNRESARFYLEMSNWSLQTAVGCYLDFC 172
Query: 478 S-PKLPSMSVKASEGPTGSLEPGARFDQNWSIVNTGTEQWPGCCRLIQAGGEPLGATPVY 654
S LPSM + + Q + + N GTE+WP C L P+ +
Sbjct: 173 SLQSLPSMKIVQEKQVNAQ-------QQAFQLQNDGTERWPNNCYLT----SPIQTQRIN 221
Query: 655 LPPLPVGHSTTVTLKLVAPSTSGTHKSFFHLVTDKGEQIGDTL 783
+P L G + + ++ P+ T + L T G GD +
Sbjct: 222 VPALRPGETCDILADMM-PTQPPT---MWRLCTSNGWYFGDAI 260
>AE014298-2563|AAN09441.1| 303|Drosophila melanogaster CG5445-PC,
isoform C protein.
Length = 303
Score = 96.7 bits (230), Expect = 3e-20
Identities = 58/163 (35%), Positives = 83/163 (50%), Gaps = 1/163 (0%)
Frame = +1
Query: 298 EIDQNLLLQFSCMNTTDREELIKQMQKLLGPSLNYNTASFFLDMSNWNLQAAICCYLDYT 477
+ID LL QFSCM TTD E+LI Q Q L+ +N +A F+L+MSNW+LQ A+ CYLD+
Sbjct: 113 DIDSLLLQQFSCMGTTDHEDLISQFQSLMNNQMNRESARFYLEMSNWSLQTAVGCYLDFC 172
Query: 478 S-PKLPSMSVKASEGPTGSLEPGARFDQNWSIVNTGTEQWPGCCRLIQAGGEPLGATPVY 654
S LPSM + + Q + + N GTE+WP C L P+ +
Sbjct: 173 SLQSLPSMKIVQEKQVNAQ-------QQAFQLQNDGTERWPNNCYLT----SPIQTQRIN 221
Query: 655 LPPLPVGHSTTVTLKLVAPSTSGTHKSFFHLVTDKGEQIGDTL 783
+P L G + + ++ P+ T + L T G GD +
Sbjct: 222 VPALRPGETCDILADMM-PTQPPT---MWRLCTSNGWYFGDAI 260
>AE014298-2562|AAF48724.1| 303|Drosophila melanogaster CG5445-PB,
isoform B protein.
Length = 303
Score = 96.7 bits (230), Expect = 3e-20
Identities = 58/163 (35%), Positives = 83/163 (50%), Gaps = 1/163 (0%)
Frame = +1
Query: 298 EIDQNLLLQFSCMNTTDREELIKQMQKLLGPSLNYNTASFFLDMSNWNLQAAICCYLDYT 477
+ID LL QFSCM TTD E+LI Q Q L+ +N +A F+L+MSNW+LQ A+ CYLD+
Sbjct: 113 DIDSLLLQQFSCMGTTDHEDLISQFQSLMNNQMNRESARFYLEMSNWSLQTAVGCYLDFC 172
Query: 478 S-PKLPSMSVKASEGPTGSLEPGARFDQNWSIVNTGTEQWPGCCRLIQAGGEPLGATPVY 654
S LPSM + + Q + + N GTE+WP C L P+ +
Sbjct: 173 SLQSLPSMKIVQEKQVNAQ-------QQAFQLQNDGTERWPNNCYLT----SPIQTQRIN 221
Query: 655 LPPLPVGHSTTVTLKLVAPSTSGTHKSFFHLVTDKGEQIGDTL 783
+P L G + + ++ P+ T + L T G GD +
Sbjct: 222 VPALRPGETCDILADMM-PTQPPT---MWRLCTSNGWYFGDAI 260
>AE014298-2561|AAF48723.1| 303|Drosophila melanogaster CG5445-PA,
isoform A protein.
Length = 303
Score = 96.7 bits (230), Expect = 3e-20
Identities = 58/163 (35%), Positives = 83/163 (50%), Gaps = 1/163 (0%)
Frame = +1
Query: 298 EIDQNLLLQFSCMNTTDREELIKQMQKLLGPSLNYNTASFFLDMSNWNLQAAICCYLDYT 477
+ID LL QFSCM TTD E+LI Q Q L+ +N +A F+L+MSNW+LQ A+ CYLD+
Sbjct: 113 DIDSLLLQQFSCMGTTDHEDLISQFQSLMNNQMNRESARFYLEMSNWSLQTAVGCYLDFC 172
Query: 478 S-PKLPSMSVKASEGPTGSLEPGARFDQNWSIVNTGTEQWPGCCRLIQAGGEPLGATPVY 654
S LPSM + + Q + + N GTE+WP C L P+ +
Sbjct: 173 SLQSLPSMKIVQEKQVNAQ-------QQAFQLQNDGTERWPNNCYLT----SPIQTQRIN 221
Query: 655 LPPLPVGHSTTVTLKLVAPSTSGTHKSFFHLVTDKGEQIGDTL 783
+P L G + + ++ P+ T + L T G GD +
Sbjct: 222 VPALRPGETCDILADMM-PTQPPT---MWRLCTSNGWYFGDAI 260
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,613,482
Number of Sequences: 53049
Number of extensions: 611138
Number of successful extensions: 1464
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1401
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1459
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3695805360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -