Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_N24
         (685 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0181 + 1274177-1274200,1274335-1276161,1276519-1277448,127...    29   4.5  
02_01_0177 + 1214226-1214294,1214707-1214794,1216095-1216308,121...    29   4.5  

>07_01_0181 +
           1274177-1274200,1274335-1276161,1276519-1277448,
           1278314-1278367
          Length = 944

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = -2

Query: 360 FFNNVLNSLCNFFEMKFHIIKCRFGINPNLYG 265
           F   V  +     E+ FH+I  +F +NP+L G
Sbjct: 285 FLTRVAKTPAQKLEILFHVISAQFDVNPSLLG 316


>02_01_0177 +
           1214226-1214294,1214707-1214794,1216095-1216308,
           1216413-1216738,1216860-1217013,1217377-1217438,
           1218078-1218133,1219456-1221279,1221775-1222698,
           1222855-1222866
          Length = 1242

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = -2

Query: 360 FFNNVLNSLCNFFEMKFHIIKCRFGINPNLYG 265
           F   V  +     E+ FH+I  +F +NP+L G
Sbjct: 599 FLTRVAKTPAQKLEILFHVISAQFDVNPSLLG 630


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,937,438
Number of Sequences: 37544
Number of extensions: 106842
Number of successful extensions: 153
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 153
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 153
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1733104716
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)