Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_N20
         (829 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    62   6e-12
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    61   1e-11
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    61   1e-11
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    61   1e-11
AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    26   0.49 
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          22   6.0  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    22   6.0  

>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 62.1 bits (144), Expect = 6e-12
 Identities = 36/132 (27%), Positives = 62/132 (46%), Gaps = 2/132 (1%)
 Frame = +1

Query: 55  SGPR*QPANWVSKINTPAFTRSXKRQXFYLHQFCDNCADLNFDNPKVVEKFDMVLKAWMG 234
           +G R  P NW+S     A+  + +R+ +YLHQF     DLN+ +  + ++   VL  WM 
Sbjct: 155 NGTRQPPNNWLSVFWGSAWQWNEERKQYYLHQFATGQPDLNYRSAALDQEMKNVLTFWMN 214

Query: 235 AGASGVRLNNARHLL--VELLEEKTRVGRGSSVDADHMRYDFWEHKHTTDLPKLKELLAR 408
            G  G R++   H+     LL+E +     +  D     Y+   H +T D  +  ++L  
Sbjct: 215 RGVDGFRIDAINHMFEDARLLDEPS----ANRTDLSKDDYESLVHLYTRDQSETYDVLRS 270

Query: 409 WSKIVTKESEPT 444
           W  ++ + S  T
Sbjct: 271 WRNLMDEHSNRT 282


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 60.9 bits (141), Expect = 1e-11
 Identities = 35/131 (26%), Positives = 65/131 (49%), Gaps = 2/131 (1%)
 Frame = +1

Query: 55  SGPR*QPANWVSKINTPAFTRSXKRQXFYLHQFCDNCADLNFDNPKVVEKFDMVLKAWMG 234
           +G R  P NWV      A++   +RQ +YLHQF     DLN+ NP V++    VL+ W+ 
Sbjct: 155 NGKRVPPTNWVGVFGGSAWSWREERQAYYLHQFAPEQPDLNYYNPVVLDDMQNVLRFWLR 214

Query: 235 AGASGVRLNNARHLLVEL--LEEKTRVGRGSSVDADHMRYDFWEHKHTTDLPKLKELLAR 408
            G  G R++   ++  ++  L+E      G + D +   Y    + H  D+P+   ++ +
Sbjct: 215 RGFDGFRVDALPYICEDMRFLDEPL---SGETNDPNKTEYTLKIYTH--DIPETYNVVRK 269

Query: 409 WSKIVTKESEP 441
           +  ++ +  +P
Sbjct: 270 FRDVLDEFPQP 280


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 60.9 bits (141), Expect = 1e-11
 Identities = 35/131 (26%), Positives = 65/131 (49%), Gaps = 2/131 (1%)
 Frame = +1

Query: 55  SGPR*QPANWVSKINTPAFTRSXKRQXFYLHQFCDNCADLNFDNPKVVEKFDMVLKAWMG 234
           +G R  P NWV      A++   +RQ +YLHQF     DLN+ NP V++    VL+ W+ 
Sbjct: 155 NGKRVPPTNWVGVFGGSAWSWREERQAYYLHQFAPEQPDLNYYNPVVLDDMQNVLRFWLR 214

Query: 235 AGASGVRLNNARHLLVEL--LEEKTRVGRGSSVDADHMRYDFWEHKHTTDLPKLKELLAR 408
            G  G R++   ++  ++  L+E      G + D +   Y    + H  D+P+   ++ +
Sbjct: 215 RGFDGFRVDALPYICEDMRFLDEPL---SGETNDPNKTEYTLKIYTH--DIPETYNVVRK 269

Query: 409 WSKIVTKESEP 441
           +  ++ +  +P
Sbjct: 270 FRDVLDEFPQP 280


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 60.9 bits (141), Expect = 1e-11
 Identities = 36/124 (29%), Positives = 57/124 (45%), Gaps = 2/124 (1%)
 Frame = +1

Query: 73  PANWVSKINTPAFTRSXKRQXFYLHQFCDNCADLNFDNPKVVEKFDMVLKAWMGAGASGV 252
           P NW+S  N   +T    R+ FY HQF     DLN+ N  V E+   ++K W+  G  G 
Sbjct: 168 PNNWLSVFNGTGWTFHEGRKQFYFHQFYKQQPDLNYRNSDVREEMKNIMKFWLDKGIDGF 227

Query: 253 RLNNARHLL--VELLEEKTRVGRGSSVDADHMRYDFWEHKHTTDLPKLKELLARWSKIVT 426
           R++   HL     +  ++  +G+  ++   H   +   H  T D P+  EL+  W   V 
Sbjct: 228 RIDAVPHLFESANISLDEPPLGKNLNLSL-HASLN---HTLTKDQPETYELVKEWRDFVD 283

Query: 427 KESE 438
             +E
Sbjct: 284 NYAE 287


>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 25.8 bits (54), Expect = 0.49
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +3

Query: 441 DGVHAEGRWLPAGP 482
           D +H E R+LPAGP
Sbjct: 4   DSIHWEARYLPAGP 17


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 22.2 bits (45), Expect = 6.0
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +1

Query: 427 KESEPTVFTLKEDGSLP 477
           K  EPTV  + +DGS P
Sbjct: 613 KYEEPTVGEISQDGSSP 629


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 22.2 bits (45), Expect = 6.0
 Identities = 11/37 (29%), Positives = 16/37 (43%)
 Frame = +1

Query: 514 RPPSAAPVPVTEDADALASRINKTLGSWPILQLTDTN 624
           R P+A+P P  + A           GS  +LQ   +N
Sbjct: 739 RSPNASPSPAEQCASTTTITARSPQGSQGLLQCATSN 775


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,378
Number of Sequences: 438
Number of extensions: 3204
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26460186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)