BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_F_N18
(729 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_07_0019 - 27090791-27090945,27091775-27091963,27092635-270926... 34 0.006
08_02_1253 - 25602258-25602640,25603305-25603767 38 0.008
01_01_0257 + 2097785-2097797,2098080-2098189,2098299-2098392,209... 36 0.025
01_06_0173 - 27221738-27221883,27222009-27222197,27222424-272225... 36 0.033
03_05_0990 - 29503950-29504462,29504567-29504686,29514956-295150... 32 0.54
01_01_0602 - 4484972-4485450,4485949-4485997,4486108-4486237,448... 31 0.71
02_05_1010 + 33477878-33478446,33478709-33478834,33478905-334791... 31 0.94
12_02_1259 - 27382639-27384284,27386570-27386612 31 1.2
04_01_0006 - 112476-114182,114627-114676,115289-115463 30 2.2
08_02_0036 - 11455762-11455802,11455996-11456104,11456207-114568... 29 2.9
07_03_1775 + 29431106-29431193,29431290-29431329,29431620-294320... 29 2.9
01_06_1402 + 37052996-37053449,37053533-37053630,37053718-370538... 29 2.9
01_06_0404 + 29098141-29098214,29098459-29098673,29099491-290995... 29 2.9
12_02_1071 + 25824311-25824460,25824774-25824857,25825168-258252... 29 3.8
04_04_1211 + 31783076-31783680,31784162-31784427,31784546-31785378 29 3.8
03_04_0138 - 17624099-17624141,17624619-17625166 29 3.8
08_02_0797 + 21307534-21307639,21307907-21308988,21309385-213094... 29 5.0
07_03_1319 + 25790112-25790283,25790362-25790429 29 5.0
05_07_0208 + 28412736-28415348 29 5.0
05_05_0230 - 23476919-23477372,23477656-23477695,23478578-234787... 29 5.0
04_04_0433 + 25163111-25163471,25163943-25164154,25164420-251647... 29 5.0
06_03_0749 + 24133302-24134274,24134585-24135272,24135751-241358... 28 6.6
06_01_1002 + 7796367-7796651,7796727-7797489,7797800-7797915 28 6.6
06_01_0992 - 7705550-7705629,7706046-7706676,7707217-7707669 28 6.6
05_03_0482 - 14568108-14568284,14568912-14569970,14570532-145712... 28 6.6
03_02_0882 - 12121917-12124446,12124739-12124919,12125057-121251... 28 6.6
10_08_0427 + 17828007-17828570,17829788-17829904,17830319-178303... 28 8.7
08_02_0799 - 21317728-21317895,21318018-21318146,21318396-213184... 28 8.7
>05_07_0019 -
27090791-27090945,27091775-27091963,27092635-27092694,
27092793-27092981,27093116-27093209,27093319-27093428,
27093657-27093969
Length = 369
Score = 33.9 bits (74), Expect(2) = 0.006
Identities = 22/64 (34%), Positives = 35/64 (54%)
Frame = +1
Query: 484 IGRLRPHFFDVCRPIPDAGSSQNALGYIQEYRCSGGDEALLKDMRLSFPSAHASFSMYCA 663
+GR RP+FF C PD N + + C G D++++K+ SFPS H S+S +
Sbjct: 124 VGRPRPNFFWRC--FPDGIPKYNNI--TRGVICHG-DKSVIKEGHKSFPSGHTSWS-FAG 177
Query: 664 IXFI 675
+ F+
Sbjct: 178 LGFL 181
Score = 23.4 bits (48), Expect(2) = 0.006
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 15/91 (16%)
Frame = +1
Query: 136 IVDFVVLACVSFPLLALLLWAEPYHRGYFEDDL-SLRLPFKQQSISEG-------LLAGV 291
++D++VLA + + A L EP+HR ED + SLR P K+ ++ L +
Sbjct: 36 LLDWIVLALL-VAIDAGLNLIEPFHRFVGEDMMISLRYPLKRNTVPIWAVPVRLHLPPFL 94
Query: 292 GFAF-------IIFTVLITEIVRDRQGKGIG 363
F ++F+VLIT ++ D G+G
Sbjct: 95 DFRKKKTVPDRLLFSVLITAVLTDAIKDGVG 125
>08_02_1253 - 25602258-25602640,25603305-25603767
Length = 281
Score = 37.9 bits (84), Expect = 0.008
Identities = 27/65 (41%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
Frame = -3
Query: 646 SSRVHSETRGACPSREP-HRHRYIGTPGCSRGRFARIRRPGS-ACRHRRNVGAVSRSRT- 476
SSR + R ACPSR P R R G R AR RR G R RR +G V +
Sbjct: 130 SSRAAATARHACPSRRPRRRRRRSGGESGGGDRVARERRGGDRGVRMRRGMGMVDATHAD 189
Query: 475 SRDWL 461
R WL
Sbjct: 190 GRRWL 194
>01_01_0257 +
2097785-2097797,2098080-2098189,2098299-2098392,
2098786-2098974,2099061-2099120,2099231-2099391
Length = 208
Score = 36.3 bits (80), Expect = 0.025
Identities = 24/73 (32%), Positives = 37/73 (50%)
Frame = +1
Query: 457 LTANLAKYVIGRLRPHFFDVCRPIPDAGSSQNALGYIQEYRCSGGDEALLKDMRLSFPSA 636
+ + K +GR RP FF C PD + + + C G +++ LKD R SFPS
Sbjct: 15 VVTTVVKNAVGRPRPDFFWRC--FPDGKQLYDQV--TGDVICHG-EKSFLKDGRKSFPSG 69
Query: 637 HASFSMYCAIXFI 675
H S+S + + F+
Sbjct: 70 HTSWS-FAGLGFL 81
>01_06_0173 -
27221738-27221883,27222009-27222197,27222424-27222517,
27222647-27222756,27222849-27222936,27223046-27223279
Length = 286
Score = 35.9 bits (79), Expect = 0.033
Identities = 27/88 (30%), Positives = 42/88 (47%)
Frame = +1
Query: 412 YSTVGIFTFGAACQQLTANLAKYVIGRLRPHFFDVCRPIPDAGSSQNALGYIQEYRCSGG 591
++ +GI F + + K +GR RP+FF C P A G I C G
Sbjct: 104 HAVLGIL-FSVLITGVLTDAIKDAVGRPRPNFFWRCFPDGIAVFDNVTTGVI----CHG- 157
Query: 592 DEALLKDMRLSFPSAHASFSMYCAIXFI 675
D +++K+ SFPS H S+S + + F+
Sbjct: 158 DASVIKEGHKSFPSGHTSWS-FAGLGFL 184
>03_05_0990 -
29503950-29504462,29504567-29504686,29514956-29515012,
29515635-29515689,29515765-29515845,29515928-29515983,
29516112-29516256,29516347-29516415,29517355-29517467,
29517619-29517708,29518112-29518176,29519256-29519667
Length = 591
Score = 31.9 bits (69), Expect = 0.54
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +3
Query: 438 WGRLSTAHSQSREVRDRETAPTFLRCLQADPGR--RILAKRPRLHPG 572
WG+ S+ + D E +P L L DP R R+L +PRL PG
Sbjct: 40 WGKRSSPTASPPADSDDEGSPRGLSLLPRDPERPPRLLVVQPRLRPG 86
>01_01_0602 -
4484972-4485450,4485949-4485997,4486108-4486237,
4486636-4486778,4486819-4486877,4487167-4487200,
4487489-4487629,4487719-4487907,4488027-4488122,
4488163-4488225,4488588-4489097
Length = 630
Score = 31.5 bits (68), Expect = 0.71
Identities = 20/61 (32%), Positives = 28/61 (45%)
Frame = +2
Query: 377 RGRSYPAGCGRRTRPWESSRLGPPVNSSQPISRST*SGDCAHISSMSAGRSRTPDPRKTP 556
RG + R + SSR P+ S QP S+ST SG + S +S +P P+
Sbjct: 535 RGVALQTKSSRIVKDTTSSRRRSPIRS-QPRSKSTSSGKAKPVRSAKPSKSSSPSPKVAK 593
Query: 557 S 559
S
Sbjct: 594 S 594
>02_05_1010 +
33477878-33478446,33478709-33478834,33478905-33479190,
33479293-33479484,33479641-33479870,33480379-33480718,
33481673-33481789,33481940-33482014
Length = 644
Score = 31.1 bits (67), Expect = 0.94
Identities = 22/79 (27%), Positives = 32/79 (40%)
Frame = +2
Query: 437 LGPPVNSSQPISRST*SGDCAHISSMSAGRSRTPDPRKTPSATSRSTDVAVAMRLS*RTC 616
L PP ++ SRS + D H + AG P + P +R D A A L C
Sbjct: 478 LPPPDSADLSSSRSRYTNDDEHDARQHAGNEE--QPAEAPETEARRADAAAAALLD---C 532
Query: 617 ASRFRVHTRASLCTVPYXL 673
S + ++ C+ P L
Sbjct: 533 LSHYPAYSSGVYCSGPRVL 551
>12_02_1259 - 27382639-27384284,27386570-27386612
Length = 562
Score = 30.7 bits (66), Expect = 1.2
Identities = 31/137 (22%), Positives = 56/137 (40%), Gaps = 5/137 (3%)
Frame = +1
Query: 106 MAVDRLIWKIIVDFVVLACVSFPLLALLLWAEPYHRGYFEDDLSLRLPFKQQSISEGLLA 285
M DR + + + + V F ++AL W Y R R+ +++ IS+
Sbjct: 343 MQSDRRVGRSGFEVPAGSMVVFNMVALTAWLPVYDRAVVP--ALRRVTGREEGISQLQRI 400
Query: 286 GVGFAFIIFTVLITEIVRD-RQGKGIGGKFLSGSLIP----GWLWETYSTVGIFTFGAAC 450
G+G A + T+ + V R+G G G ++P L E ++ +G+ C
Sbjct: 401 GIGLALSVATMAVAVAVEQRRRGAGGGSSSSWAWMVPQQAMAGLSEAFAAIGL---NELC 457
Query: 451 QQLTANLAKYVIGRLRP 501
+ + + V G L P
Sbjct: 458 YKESPESMRSVAGALSP 474
>04_01_0006 - 112476-114182,114627-114676,115289-115463
Length = 643
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +2
Query: 152 CSRAFHFPCSLCCCGRSPITAATLKMTSLCDCPLNSSPY 268
CS +FHFPC + AAT +C P +P+
Sbjct: 97 CSHSFHFPC--IAAHAHALAAATALSCPVCAAPWRQAPF 133
>08_02_0036 -
11455762-11455802,11455996-11456104,11456207-11456854,
11457422-11457491,11458563-11458624,11458729-11458803,
11459423-11459514,11460233-11461466
Length = 776
Score = 29.5 bits (63), Expect = 2.9
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = -1
Query: 312 ENNESEADASQEPFRYGLLFKGQSQREVIFKVAAVIGLRPQQQSEQGK*N 163
E + E +A + GL F+G S EV + A ++ R ++ +GK N
Sbjct: 137 EEEDEEEEAGEAGLHLGLGFRGCSNEEVELEEATLVTPRKPKEKPKGKRN 186
>07_03_1775 +
29431106-29431193,29431290-29431329,29431620-29432080,
29432173-29432363,29432503-29432635,29432839-29433428
Length = 500
Score = 29.5 bits (63), Expect = 2.9
Identities = 20/77 (25%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Frame = -1
Query: 405 PQPAGYERPRQKLSADTLTLPVTHYLSD*NRENNESEADASQEP----FRYGLLFKGQSQ 238
P P+ + P + S +T+P++ E+N + DA +P YGL+ G S
Sbjct: 100 PSPSPFTAPPKSASPAAITIPISPSTPQPKAESNPAVEDAPAQPRHSWRNYGLVTAG-SA 158
Query: 237 REVIFKVAAVIGLRPQQ 187
++ +A+VI R ++
Sbjct: 159 VFLVMTIASVIYCRAKK 175
>01_06_1402 +
37052996-37053449,37053533-37053630,37053718-37053888,
37054017-37054117,37054928-37055063,37055155-37055205,
37055311-37055598,37055896-37056130,37056408-37056523,
37057300-37057496,37057739-37057745
Length = 617
Score = 29.5 bits (63), Expect = 2.9
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 8/66 (12%)
Frame = +2
Query: 386 SYPAGCGRRTRPWESSRLGPPVNSSQPIS-------RST*SGD-CAHISSMSAGRSRTPD 541
S +G RR RP PP +QP+S +S SG+ A +S+ S+G+ P
Sbjct: 2 SSSSGAARRARPGPWPPAPPPQPQAQPLSWAKRTGFQSRVSGESVAIVSASSSGQVSLPR 61
Query: 542 PRKTPS 559
P + PS
Sbjct: 62 PAEAPS 67
>01_06_0404 +
29098141-29098214,29098459-29098673,29099491-29099596,
29099686-29100235,29100332-29100429,29100519-29100764,
29100867-29100981,29101092-29101305,29101402-29101991
Length = 735
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = -2
Query: 377 DRNFPPIPLPCLSRTISVIKTVKIMKAKP 291
D N+P I +PCLS + +V + VK + A P
Sbjct: 626 DLNYPSIAVPCLSGSATVRRRVKNVGAAP 654
>12_02_1071 +
25824311-25824460,25824774-25824857,25825168-25825246,
25825334-25825428,25825940-25826067,25826160-25826393,
25826509-25826683,25826716-25826748,25827292-25827375,
25827929-25828169,25828275-25828453,25828800-25828873,
25830800-25830950,25831178-25831252,25831748-25831778,
25832107-25832339
Length = 681
Score = 29.1 bits (62), Expect = 3.8
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = -2
Query: 455 C*QAAPNVKIPTVEYVSHSQPGMSDPDRNFP-PIPLPCL 342
C Q A +P + + Q G S+P R FP P P P L
Sbjct: 521 CSQMAARTTVPVLPMMDQHQGGHSEPSRLFPSPNPYPDL 559
>04_04_1211 + 31783076-31783680,31784162-31784427,31784546-31785378
Length = 567
Score = 29.1 bits (62), Expect = 3.8
Identities = 12/46 (26%), Positives = 22/46 (47%)
Frame = -2
Query: 395 PGMSDPDRNFPPIPLPCLSRTISVIKTVKIMKAKPTPAKSPSDMDC 258
PG + R PP P PC++ S ++ ++ + T P ++ C
Sbjct: 8 PGTTATPRMAPPPPPPCITNLQSTLRYNNLLLHRKTKGWKPRNVSC 53
>03_04_0138 - 17624099-17624141,17624619-17625166
Length = 196
Score = 29.1 bits (62), Expect = 3.8
Identities = 31/126 (24%), Positives = 45/126 (35%), Gaps = 6/126 (4%)
Frame = +1
Query: 274 GLLAGVGFAF-----IIFTVLITEIVRDRQGKGIGGKFLSGSLIPGWLWETYSTVGIFTF 438
G +AG GF F ++ + + +G G GG + GS IP W W+ +
Sbjct: 64 GAMAGFGFLFPNNLRLLRGFPAVQELHANKGSGGGGVAVWGSSIPWWEWDNPAAPSALR- 122
Query: 439 GAACQQLTANLAKYVIGRLRPHFFDVCRPIPDAGSSQNALGYIQEYRCSGGDEALLKDMR 618
A C+ R R H D + L Y G D+ L+ R
Sbjct: 123 AALCRLYAEAYCGSFCSR-RIHGADAVEEEKEKKKKLRVLRYDANAAVGGDDDDELQQCR 181
Query: 619 LS-FPS 633
L +PS
Sbjct: 182 LRLYPS 187
>08_02_0797 +
21307534-21307639,21307907-21308988,21309385-21309432,
21309705-21310217
Length = 582
Score = 28.7 bits (61), Expect = 5.0
Identities = 17/66 (25%), Positives = 30/66 (45%)
Frame = +3
Query: 381 VAHTRLAVGDVLDRGNLHVWGRLSTAHSQSREVRDRETAPTFLRCLQADPGRRILAKRPR 560
+A TR + D+ R L G+ ST H + + + + FLRC +A + ++ +
Sbjct: 1 MALTRRLLIDLSSRRRLFNAGKFSTTHKKKPVLHEAVSLAGFLRCSRALVSWMVAERKMQ 60
Query: 561 LHPGVP 578
P P
Sbjct: 61 PSPAAP 66
>07_03_1319 + 25790112-25790283,25790362-25790429
Length = 79
Score = 28.7 bits (61), Expect = 5.0
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = -3
Query: 289 RQPRALPIWTAV*RAVAERGHLQSSRGDRAPPTAAER 179
R PR W+ + R+ + GH SR PP+AAER
Sbjct: 7 RNPRRCCRWSVL-RSTSPVGHQVGSRRPPVPPSAAER 42
>05_07_0208 + 28412736-28415348
Length = 870
Score = 28.7 bits (61), Expect = 5.0
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +2
Query: 116 ID*YGKLLWISLCSRAFHFPCSLCCCGRSP 205
+D Y ++LW + + FPC L CG P
Sbjct: 182 LDLYYRMLWAGMRPDVYTFPCVLRTCGGIP 211
>05_05_0230 -
23476919-23477372,23477656-23477695,23478578-23478700,
23479114-23479151,23479289-23479674,23479875-23481053,
23481805-23481928,23482733-23482779
Length = 796
Score = 28.7 bits (61), Expect = 5.0
Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 6/63 (9%)
Frame = -3
Query: 649 RSSRVHSETRGACPSREPHRHRYIGTPGCSRGRFARIRRPGS------ACRHRRNVGAVS 488
R+S + ++ + AC EPHR R G + ++ S +CRHRR +
Sbjct: 709 RASLLGTDAKAACHREEPHRRRRKGPRSLHYPQLWKLLTSASRAGEEFSCRHRRLLAGEG 768
Query: 487 RSR 479
SR
Sbjct: 769 PSR 771
>04_04_0433 +
25163111-25163471,25163943-25164154,25164420-25164701,
25164794-25164916,25165511-25165664,25165754-25165965,
25166143-25166212,25166294-25166424
Length = 514
Score = 28.7 bits (61), Expect = 5.0
Identities = 20/52 (38%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = -3
Query: 712 SSPAT-CLSLGRRR*XIWHST*RSSRVHSETRGACPSREPHRHRYIGTPGCS 560
S P+T C S RRR W R R+ RG CPS R + +P CS
Sbjct: 20 SLPSTACTSSSRRRASPWGGAGRLIRLR--LRGHCPSPASARAARVVSPRCS 69
>06_03_0749 +
24133302-24134274,24134585-24135272,24135751-24135857,
24137565-24137815
Length = 672
Score = 28.3 bits (60), Expect = 6.6
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = -2
Query: 407 SHSQPGMSDPDRNFPPIPLPCLSRTISVIKTVKIMKAKPTPAKSPSDMD 261
+ +PG+ DP +F PL + I KT + +A+ A P DMD
Sbjct: 409 ARKEPGVVDPHDDFLDTPLEAVKNMIRNPKTPE--EAQALAASPPKDMD 455
>06_01_1002 + 7796367-7796651,7796727-7797489,7797800-7797915
Length = 387
Score = 28.3 bits (60), Expect = 6.6
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +3
Query: 396 LAVGDVLDRGNLHVWGRLSTAHSQSREVRDRET 494
L VL+R NLH+W + ++VRD +T
Sbjct: 252 LGFAAVLERSNLHLWSKPMDEWEHLQDVRDLKT 284
>06_01_0992 - 7705550-7705629,7706046-7706676,7707217-7707669
Length = 387
Score = 28.3 bits (60), Expect = 6.6
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +3
Query: 396 LAVGDVLDRGNLHVWGRLSTAHSQSREVRDRET 494
L VL+R NLH+W + +VRD +T
Sbjct: 264 LGFAAVLERSNLHLWSKSMDQWEHLEDVRDLKT 296
>05_03_0482 -
14568108-14568284,14568912-14569970,14570532-14571236,
14571376-14571656,14571748-14571769
Length = 747
Score = 28.3 bits (60), Expect = 6.6
Identities = 17/58 (29%), Positives = 24/58 (41%)
Frame = -3
Query: 610 PSREPHRHRYIGTPGCSRGRFARIRRPGSACRHRRNVGAVSRSRTSRDWL*AVDRRPQ 437
P + PH+ G+ S A G+A RHR A + R+ RD R P+
Sbjct: 17 PRKFPHQRNTKGSSSASAAAAASASVAGAAVRHRAPFLAAAIKRSPRDIYRTATRPPE 74
>03_02_0882 -
12121917-12124446,12124739-12124919,12125057-12125134,
12125731-12125764,12125864-12125975,12126053-12126238,
12126505-12126575
Length = 1063
Score = 28.3 bits (60), Expect = 6.6
Identities = 18/65 (27%), Positives = 28/65 (43%)
Frame = +2
Query: 377 RGRSYPAGCGRRTRPWESSRLGPPVNSSQPISRST*SGDCAHISSMSAGRSRTPDPRKTP 556
R S P + P +R P S P++RS+ SG ++ + +P P
Sbjct: 628 RRNSSPPVLPKELTPKAPARKSSPKPSPAPVTRSSWSGGSLTKATTAQKTKSSPGTVSAP 687
Query: 557 SATSR 571
+ATSR
Sbjct: 688 TATSR 692
>10_08_0427 +
17828007-17828570,17829788-17829904,17830319-17830384,
17831466-17831572,17831939-17832017,17832861-17833574,
17834040-17834148,17834263-17834429,17834876-17834950,
17835025-17835117,17835202-17835294
Length = 727
Score = 27.9 bits (59), Expect = 8.7
Identities = 17/45 (37%), Positives = 19/45 (42%)
Frame = +2
Query: 464 PISRST*SGDCAHISSMSAGRSRTPDPRKTPSATSRSTDVAVAMR 598
P+ S C SS SA SR DP PS+ S S A R
Sbjct: 12 PLPAGAVSSSCCSSSSSSASMSRRWDPSPNPSSGSGSRLFLAARR 56
>08_02_0799 -
21317728-21317895,21318018-21318146,21318396-21318457,
21318519-21318534,21318590-21318694,21318993-21319133,
21319338-21319412,21319510-21319611,21319697-21319792,
21320340-21320451,21320642-21320715,21321016-21321097,
21321201-21321508
Length = 489
Score = 27.9 bits (59), Expect = 8.7
Identities = 16/47 (34%), Positives = 21/47 (44%)
Frame = -1
Query: 705 PPLAFHLDVEDKXYGTVHREARVCTRKREAHVLQESLIATATSVLLD 565
PP H + YG H A+ CT K+ + AT+T V LD
Sbjct: 15 PPQWLHSTRDRILYGYSHSNAKECTCKKTKRPAPLCVKATSTKVELD 61
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,785,906
Number of Sequences: 37544
Number of extensions: 510820
Number of successful extensions: 1799
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1711
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1794
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1909952136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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