Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_N17
         (651 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    23   1.6  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    22   3.8  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    21   6.7  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    21   8.8  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = +2

Query: 563 HTLKDPFELCCPHGQEAYLC 622
           H L + F   CP G   Y+C
Sbjct: 238 HDLVNSFSCSCPSGTLGYIC 257


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +2

Query: 14  DFVDVFSVGFILI*WFSVFCNFCMYL 91
           DF D+F + F+LI  +S   +F  Y+
Sbjct: 195 DFNDIFGISFLLIISYSTL-HFVNYI 219


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = +2

Query: 26  VFSVGFILI*WFSVF 70
           +FS GFIL+ + SVF
Sbjct: 392 MFSFGFILLRFLSVF 406


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 11/45 (24%), Positives = 15/45 (33%)
 Frame = +3

Query: 252 EVESKNEKVVLEVKSGYAELFGTELVKGKPYEFHTGAKVAVFTWH 386
           E++        + +    EL    LV    Y F   A    F WH
Sbjct: 114 EIKENTRLAEKQARISILELVAVHLVLAFLYSFDLFANGITFGWH 158


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,356
Number of Sequences: 336
Number of extensions: 3016
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)