Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_F_N17
(651 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_02_0074 + 6567362-6567550,6567685-6567753,6567869-6567970,656... 136 1e-32
01_01_0598 + 4443768-4443949,4444053-4444150,4444275-4444308,444... 44 1e-04
01_03_0248 + 14235808-14235989,14236538-14236635,14237171-142372... 42 4e-04
05_07_0299 - 29073900-29073984,29074125-29074158,29074269-290743... 33 0.15
04_03_0687 + 18713603-18713962,18715318-18715539,18717068-187172... 32 0.46
07_03_0631 + 20104332-20106802,20106904-20107030,20107352-201074... 31 0.80
07_01_0663 + 4975950-4977688,4978183-4978528 31 1.1
09_01_0155 - 2301903-2302151,2302334-2302491,2302651-2302819,230... 30 1.4
07_03_0293 + 16321539-16321893,16322020-16322207,16322881-163229... 29 2.4
03_06_0607 + 35037467-35038624 29 4.2
09_06_0067 - 20645012-20645095,20645365-20645466,20645583-206458... 28 5.6
03_05_0911 + 28697654-28697698,28698170-28698278,28698352-286984... 28 5.6
03_02_0933 - 12505196-12505286,12505759-12505814,12508780-125088... 28 5.6
12_01_0183 - 1350451-1350477,1350887-1350969,1350977-1352696,135... 28 7.4
11_01_0183 - 1440460-1440467,1440832-1440957,1440965-1442858 28 7.4
10_06_0139 - 11139004-11139031,11139300-11141017,11141408-111414... 28 7.4
09_04_0175 - 15353903-15354005,15354189-15354280,15354408-153545... 28 7.4
07_03_0383 - 17476271-17479228,17480466-17480750 28 7.4
10_02_0105 - 5345149-5347833 27 9.8
09_04_0037 + 13992103-13992624,13993001-13993180,13993423-139936... 27 9.8
07_03_0471 + 18501496-18502104,18503009-18503260,18503367-185035... 27 9.8
04_01_0383 + 5085697-5085724,5085816-5085927,5087249-5087285,508... 27 9.8
03_06_0759 - 36059872-36059928,36059934-36060125,36060241-360603... 27 9.8
02_03_0349 + 18010414-18014283 27 9.8
>02_02_0074 +
6567362-6567550,6567685-6567753,6567869-6567970,
6568386-6568627,6569057-6569195,6569298-6569333,
6569838-6569972,6570315-6570547,6571204-6571298,
6571331-6571374,6571808-6571888
Length = 454
Score = 136 bits (329), Expect = 1e-32
Identities = 72/154 (46%), Positives = 102/154 (66%), Gaps = 8/154 (5%)
Frame = +3
Query: 213 QEFKLDPDSELRFEVESKNEKVVLEVKSGYAELFGTELVKGKPYEFHTGAKVAVFTWHGC 392
+++KL P SELR EV + V + + +G AE+FGTEL +K+A+FTWHG
Sbjct: 12 RQYKLAPQSELRVEVPP-DAPVRVRLVAGTAEVFGTELPPEGWVPVPPRSKIAIFTWHGA 70
Query: 393 TIELRGKTEVSYVAKETPMIVYLNVHAALE----QQRVAAEQ----ENTRGPVTMIVGPA 548
T+EL G +E Y + ETPM+VY+N HA L+ + R AA Q E+++GP +IVGP+
Sbjct: 71 TVELDGVSESEYTSDETPMVVYVNTHAILDARRARARAAAAQGALPESSQGPRVIIVGPS 130
Query: 549 DVGKSTLSRILLNYAVRMGRRPIYVDLDVGQGXI 650
D GKSTL ++LL++A + G +P YVDLD+GQG I
Sbjct: 131 DSGKSTLCKMLLSWAAKQGWKPTYVDLDIGQGSI 164
>01_01_0598 +
4443768-4443949,4444053-4444150,4444275-4444308,
4444629-4444780,4444871-4445051,4445707-4445887,
4446034-4446142,4446324-4446451,4446758-4446832
Length = 379
Score = 43.6 bits (98), Expect = 1e-04
Identities = 22/49 (44%), Positives = 28/49 (57%)
Frame = +3
Query: 495 AAEQENTRGPVTMIVGPADVGKSTLSRILLNYAVRMGRRPIYVDLDVGQ 641
AA PV ++ GP + GKST SR+LLN + R Y+D DVGQ
Sbjct: 26 AAASSEPAPPVVVVCGPKNAGKSTFSRLLLNSLLPRYGRVGYLDTDVGQ 74
>01_03_0248 +
14235808-14235989,14236538-14236635,14237171-14237204,
14237731-14237900,14238060-14238240,14238288-14238498,
14239122-14239233,14239360-14239487,14240201-14240263
Length = 392
Score = 41.9 bits (94), Expect = 4e-04
Identities = 19/40 (47%), Positives = 25/40 (62%)
Frame = +3
Query: 522 PVTMIVGPADVGKSTLSRILLNYAVRMGRRPIYVDLDVGQ 641
PV + GP + GKS SR+LLN V ++ Y+D DVGQ
Sbjct: 35 PVVAVCGPGNSGKSAFSRLLLNTLVGRYKKVAYLDTDVGQ 74
>05_07_0299 -
29073900-29073984,29074125-29074158,29074269-29074351,
29074457-29074607,29074853-29074957,29075099-29075168,
29075374-29075410,29076732-29076843,29076956-29076983
Length = 234
Score = 33.5 bits (73), Expect = 0.15
Identities = 23/89 (25%), Positives = 38/89 (42%)
Frame = +3
Query: 321 ELVKGKPYEFHTGAKVAVFTWHGCTIELRGKTEVSYVAKETPMIVYLNVHAALEQQRVAA 500
+ G PY A +++ W C+ LRGK E S++A + + + + V+
Sbjct: 143 KFASGIPYPITLSAVISLSGWLPCSRTLRGKMESSHIAARRAASLPILLSHGRADEVVSY 202
Query: 501 EQENTRGPVTMIVGPADVGKSTLSRILLN 587
G T+ DVGK SR+ L+
Sbjct: 203 RNAERLGHYTIPEEMDDVGKWLSSRLGLD 231
>04_03_0687 +
18713603-18713962,18715318-18715539,18717068-18717256,
18717419-18717612,18718193-18718328
Length = 366
Score = 31.9 bits (69), Expect = 0.46
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +3
Query: 396 IELRGKTEVSYVAKETPMIVYLNVHAALEQQR-VAAEQENTRGPVTMIVGPADVGKSTLS 572
+EL +SY Y + +++Q+ ++A +E G T+IVGP+ VGKS+L
Sbjct: 114 VELVDDKTISYWRDRMKSWGYDPLFLSVDQKSGLSALEETLEGQTTVIVGPSGVGKSSLI 173
Query: 573 RIL 581
L
Sbjct: 174 NAL 176
>07_03_0631 +
20104332-20106802,20106904-20107030,20107352-20107479,
20108771-20109083
Length = 1012
Score = 31.1 bits (67), Expect = 0.80
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
Frame = +3
Query: 435 KETPMIVYLNVHAALEQQRVAAEQENTRGPVTM----IVGPADVGKSTLSRILLNY 590
K+ M + A E + QE TRG T+ IVG A VGK+ L++++ N+
Sbjct: 139 KDQLMSIIFPNEAQAEHFPASRMQEETRGTATVKVVCIVGEAGVGKTALAQVIYNH 194
>07_01_0663 + 4975950-4977688,4978183-4978528
Length = 694
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +3
Query: 516 RGPVTMIVGPADVGKSTLSRILL-NYAVRMGRRPIYVDLDVGQGXI 650
+G VT ++GP+ GKSTL L A R+G R ++V G +
Sbjct: 62 KGCVTAVMGPSGAGKSTLLDALAGRIAARLGGRVALDGVEVSPGLV 107
>09_01_0155 -
2301903-2302151,2302334-2302491,2302651-2302819,
2303796-2304839,2305792-2306075,2306318-2307333,
2307937-2308085
Length = 1022
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +3
Query: 510 NTRGPVTMIVGPADVGKSTLSRILLNYAVRMGRR 611
N + PV +I GP GK+ L L+ AVR G R
Sbjct: 559 NNKRPVLIIQGPPGTGKTGLLSYLIACAVRKGER 592
>07_03_0293 +
16321539-16321893,16322020-16322207,16322881-16322904,
16323497-16323550,16323854-16323944,16324715-16324815,
16324949-16324999,16326626-16326754,16327772-16327834,
16327928-16328171,16329628-16329776,16329855-16329944,
16330343-16330477,16330579-16330635,16331079-16331135,
16332299-16332336,16332532-16332601,16332971-16333207
Length = 710
Score = 29.5 bits (63), Expect = 2.4
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +3
Query: 519 GPVTMIVGPADVGKSTLSRILLNY 590
G +T +VGP+ GKST+ ++L Y
Sbjct: 458 GKITALVGPSGAGKSTVVQLLARY 481
>03_06_0607 + 35037467-35038624
Length = 385
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/44 (27%), Positives = 18/44 (40%)
Frame = +2
Query: 446 DDSVPERTCSIRTAKSCCRTREHKRSGNNDSWACRCWQVHTLKD 577
D S R C+++ R H++ D W C C + KD
Sbjct: 254 DKSFTCRRCNVKRFSVVADLRTHEKHCGRDRWVCSCGTSFSRKD 297
>09_06_0067 -
20645012-20645095,20645365-20645466,20645583-20645828,
20646042-20646236,20646343-20646636,20646952-20647134,
20647534-20647593,20647796-20648002,20648081-20648282,
20648367-20648494,20648759-20648842,20648955-20649134,
20649281-20649372,20649620-20649789,20650226-20650337,
20650451-20650554,20651262-20651371
Length = 850
Score = 28.3 bits (60), Expect = 5.6
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 477 LEQQRVAAEQENTRGPVTMIVGPADVGKSTLS 572
+E V + + RGPV VGP VGK++L+
Sbjct: 387 IEYLAVRKLKPDARGPVLCFVGPPGVGKTSLA 418
>03_05_0911 +
28697654-28697698,28698170-28698278,28698352-28698433,
28698486-28698514,28699472-28699567,28699860-28699963,
28700071-28700201,28700276-28700369,28701666-28701721,
28702728-28702821
Length = 279
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3
Query: 519 GPVTMIVGPADVGKSTLSRILLNYAVRMGRRPIYVDLD 632
G +++GPA GKST L + +GR V+LD
Sbjct: 2 GYAQLVIGPAGSGKSTYCSSLYQHCETVGRTIHMVNLD 39
>03_02_0933 -
12505196-12505286,12505759-12505814,12508780-12508873,
12508949-12509079,12509187-12509290,12509585-12509680,
12510752-12510860,12511252-12511296
Length = 241
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3
Query: 519 GPVTMIVGPADVGKSTLSRILLNYAVRMGRRPIYVDLD 632
G +++GPA GKST L + +GR V+LD
Sbjct: 2 GYAQLVIGPAGSGKSTYCSSLYQHCETVGRTIHMVNLD 39
>12_01_0183 -
1350451-1350477,1350887-1350969,1350977-1352696,
1354258-1354428,1355892-1355939
Length = 682
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = -3
Query: 562 DLPTSAGPTIIVTGPLVFSCSAATLCCSNAACTFRYTIIGVSL 434
DLP SA + P+V+ CS+ C N C R T G+ L
Sbjct: 463 DLPYSATGLLAKHTPMVYECSSNCQCSHN--CRNRITQKGIKL 503
>11_01_0183 - 1440460-1440467,1440832-1440957,1440965-1442858
Length = 675
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = -3
Query: 562 DLPTSAGPTIIVTGPLVFSCSAATLCCSNAACTFRYTIIGVSL 434
DLP SA + P+V+ CS+ C N C R T G+ L
Sbjct: 448 DLPYSATGLLAKHTPMVYECSSNCQCSHN--CRNRITQKGIKL 488
>10_06_0139 -
11139004-11139031,11139300-11141017,11141408-11141477,
11142520-11143361
Length = 885
Score = 27.9 bits (59), Expect = 7.4
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +3
Query: 498 AEQENTRGPVTMIVGPADVGKSTLSRILLN 587
A E+ + V +VG + +GK+TL+++L N
Sbjct: 195 ANDEDQKLKVVSVVGSSGIGKTTLAKLLYN 224
>09_04_0175 -
15353903-15354005,15354189-15354280,15354408-15354553,
15354661-15354814,15354885-15354985,15355055-15355145,
15355146-15355378,15355501-15355736,15355839-15356066,
15356150-15356370,15356869-15356990,15357125-15357451,
15357616-15357754,15357822-15357901,15358478-15358678,
15359431-15359757,15360144-15360897
Length = 1184
Score = 27.9 bits (59), Expect = 7.4
Identities = 24/93 (25%), Positives = 40/93 (43%), Gaps = 4/93 (4%)
Frame = +3
Query: 306 ELFGTELVKGKPYEFHTG-AKVAVFTWHGCTIELRGKTEVSYVAKETPMIVYLNVHAALE 482
+ FG + +G G KV+V +G +E + + + ++ V A
Sbjct: 170 DAFGNGVARGADMPGGNGNLKVSVSRSNGAIVEFKDFRYNGWAEDGRISLEFVPVVAGAF 229
Query: 483 QQRVAAEQENTRG-PVTMIV--GPADVGKSTLS 572
RV ++ RG P+ + V GP D+ KST S
Sbjct: 230 LVRVQSDDNTLRGSPLLLTVNPGPVDIAKSTCS 262
>07_03_0383 - 17476271-17479228,17480466-17480750
Length = 1080
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +3
Query: 510 NTRGPVTMIVGPADVGKSTLSRILLNYAVRMGRRPIYV 623
NT P+ I+G VGK+TL+R + + A M ++V
Sbjct: 181 NTTCPLFAIIGTIGVGKTTLARKVYHKAAAMFETRLWV 218
>10_02_0105 - 5345149-5347833
Length = 894
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +3
Query: 468 HAALEQQRVAAEQENTRGPVTMIVGPADVGKSTLSRILLNYAVRMG 605
H + + +Q N V IVG A GKSTL+++ + + G
Sbjct: 170 HEIAQIKSYLLDQNNMNLTVISIVGQAGAGKSTLAKLAYSSVITEG 215
>09_04_0037 +
13992103-13992624,13993001-13993180,13993423-13993691,
13994120-13995773
Length = 874
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +3
Query: 507 ENTRGPVTMIVGPADVGKST 566
E RG VT I+GP+ GKST
Sbjct: 131 EAPRGQVTAILGPSGAGKST 150
>07_03_0471 +
18501496-18502104,18503009-18503260,18503367-18503537,
18503693-18503743,18503868-18503960,18504125-18504220,
18504318-18504368,18504452-18504570,18504909-18505017,
18505391-18505513,18505590-18505661,18505963-18506034,
18506125-18506191,18506260-18506402,18506494-18506565,
18506632-18506760,18507317-18507472,18507579-18507692,
18507791-18507889,18507974-18508051,18508402-18508536,
18509081-18509155,18509247-18509361,18509458-18509828,
18509903-18509965,18510049-18510120,18510285-18510413,
18510512-18510628,18510902-18511018
Length = 1289
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/49 (24%), Positives = 25/49 (51%)
Frame = +3
Query: 477 LEQQRVAAEQENTRGPVTMIVGPADVGKSTLSRILLNYAVRMGRRPIYV 623
L +V A + + P+++I GP GK+ S ++ + + G+ + V
Sbjct: 513 LNASQVLAVKSVLQKPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLV 561
>04_01_0383 +
5085697-5085724,5085816-5085927,5087249-5087285,
5087512-5087581,5087704-5087808,5088022-5088172,
5088257-5088339,5089152-5089372,5089465-5089501,
5089668-5089753
Length = 309
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3
Query: 339 PYEFHTGAKVAVFTWHGCTIELRGKTEVSYVA 434
PY A +++ W C+ LR KTE S++A
Sbjct: 149 PYPITLSAVISLSGWLPCSRTLRSKTESSHMA 180
>03_06_0759 -
36059872-36059928,36059934-36060125,36060241-36060348,
36060440-36060712,36060923-36061009,36061085-36061276,
36061841-36061969,36062087-36062200,36062446-36062490,
36062785-36062956,36063229-36063515,36063989-36064456
Length = 707
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +3
Query: 519 GPVTMIVGPADVGKSTLSRIL 581
G +T+I+GPA GKSTL R +
Sbjct: 108 GTLTVIMGPARSGKSTLLRAI 128
>02_03_0349 + 18010414-18014283
Length = 1289
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/36 (33%), Positives = 23/36 (63%)
Frame = +3
Query: 480 EQQRVAAEQENTRGPVTMIVGPADVGKSTLSRILLN 587
+++ A+EQ P+ IVG +GK+TL++++ N
Sbjct: 203 KRENSASEQIVGNIPIFCIVGLGGIGKTTLAQVICN 238
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,576,873
Number of Sequences: 37544
Number of extensions: 277164
Number of successful extensions: 1095
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1061
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1092
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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