Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_F_N13
(752 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor ... 56 2e-10
AY453651-1|AAR89057.1| 199|Tribolium castaneum serrate protein. 33 0.002
AJ621748-1|CAF21851.1| 228|Tribolium castaneum zinc finger tran... 24 1.1
DQ138190-1|ABA03054.1| 135|Tribolium castaneum bursicon-like pr... 23 2.6
AM292357-1|CAL23169.2| 355|Tribolium castaneum gustatory recept... 23 3.5
DQ414247-1|ABD63009.2| 414|Tribolium castaneum paired protein. 21 8.0
AM292376-1|CAL23188.2| 402|Tribolium castaneum gustatory recept... 21 8.0
AM292332-1|CAL23144.2| 344|Tribolium castaneum gustatory recept... 21 8.0
>AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor
protein protein.
Length = 585
Score = 56.4 bits (130), Expect = 2e-10
Identities = 55/220 (25%), Positives = 80/220 (36%), Gaps = 21/220 (9%)
Frame = +1
Query: 130 GRSISDNLVTCGPHTCGVGAHCIHGSVRPVCACLAGYSG----DPLSQCIKIECLDNSEC 297
G + N C +C G CI G +C C G++G + ++ C CL+ + C
Sbjct: 17 GINCQTNDEDCTETSCMNGGTCIDGINSYICTCKPGFTGSNCQNRINLCDSSPCLNGATC 76
Query: 298 RSHQTCVNQHC------------VNPCE-GTCGINANCDVRNHIPVCTCPAGYTGN---- 426
+ H T HC V+ C C A C + C C G+TG
Sbjct: 77 QDHTTHYTCHCPYGYTGKDCGEYVDWCSTNPCENQATCVQNKNQYQCLCGVGWTGKVCDV 136
Query: 427 PFSSCRIADPEEACHPSPCGPNTKCHVANNQAICTCLPGYRGSPLSGCRHECESDGECGA 606
SC+ A + N C N C C GY GS +EC+S
Sbjct: 137 EMVSCKDAALRKVVPLKKLCNNGTCEDIGNSHRCHCSDGYSGSYCQTEINECDS------ 190
Query: 607 QQSCRDFKCVSPCSDCGVNADCETVAAHRAVCKCPRGYHG 726
+PC + G D + ++ CKCP+G+ G
Sbjct: 191 ----------APCQNGGTCLD--LIGSYS--CKCPKGFQG 216
Score = 47.2 bits (107), Expect = 1e-07
Identities = 36/112 (32%), Positives = 49/112 (43%), Gaps = 10/112 (8%)
Frame = +1
Query: 397 CTCPAGYTGNPFSSCRIADPEEACHPSPCGPNTKCHVANNQAICTCLPGYRGSPLSGCRH 576
CTCP G++G +C+ D E C + C C N ICTC PG+ GS +
Sbjct: 9 CTCPLGFSG---INCQTND--EDCTETSCMNGGTCIDGINSYICTCKPGFTGSNCQNRIN 63
Query: 577 ECESDGECGAQQSCRD----FKCVSPC----SDCGVNAD-CET-VAAHRAVC 702
C+S C +C+D + C P DCG D C T ++A C
Sbjct: 64 LCDS-SPCLNGATCQDHTTHYTCHCPYGYTGKDCGEYVDWCSTNPCENQATC 114
Score = 45.2 bits (102), Expect = 6e-07
Identities = 60/214 (28%), Positives = 82/214 (38%), Gaps = 45/214 (21%)
Frame = +1
Query: 220 CACLAGYSGDPLSQCIKIECLDNSECRSHQTCVN---------------QHC---VNPCE 345
C C GYSG I EC D++ C++ TC++ Q+C V+ C+
Sbjct: 170 CHCSDGYSGSYCQTEIN-EC-DSAPCQNGGTCLDLIGSYSCKCPKGFQGQNCELNVDDCK 227
Query: 346 -GTCGINANC-DVRNHIPVCTCPAGYTGNPFSSCRIADPEEACHPSPCGPNTKCHVANNQ 519
C C D+ N C+CP+G G C I + C P C N C
Sbjct: 228 PNPCQNGGTCHDLVNSFS-CSCPSGTLGY---ICEINVDD--CRPGACHNNGTCLDKVGG 281
Query: 520 AICTCLPGYRGSPLSGCRHECESD-----GECGAQQSCRDFKC----------------- 633
C C PG+ G G +EC S+ G Q D+ C
Sbjct: 282 FECKCPPGFVGPRCEGDINECLSNPCSNAGTLDCVQLVNDYHCNCKLGFMGRHCESKVNF 341
Query: 634 --VSPCSDCGVNADCETV-AAHRAVCKCPRGYHG 726
SPC + GV C T+ A H+ C CP G++G
Sbjct: 342 CATSPCQNGGV---CTTIHAGHK--CTCPEGFYG 370
Score = 39.9 bits (89), Expect = 2e-05
Identities = 36/131 (27%), Positives = 50/131 (38%), Gaps = 6/131 (4%)
Frame = +1
Query: 268 KIECLDNSECRSHQTCVNQHCVNPCE--GTCGINANCDVRNHIPVCTCPAGYTGNPFSSC 441
+ C D QT +N+ PC+ GTC D+ C CP G+ G +C
Sbjct: 169 RCHCSDGYSGSYCQTEINECDSAPCQNGGTC-----LDLIGSYS-CKCPKGFQGQ---NC 219
Query: 442 RIADPEEACHPSPCGPNTKCHVANNQAICTCLPGYRGSPLSGCRHECESDGECGAQQSCR 621
+ + C P+PC CH N C+C G G +C G C +C
Sbjct: 220 ELNVDD--CKPNPCQNGGTCHDLVNSFSCSCPSGTLGYICEINVDDCR-PGACHNNGTCL 276
Query: 622 D----FKCVSP 642
D F+C P
Sbjct: 277 DKVGGFECKCP 287
Score = 38.7 bits (86), Expect = 5e-05
Identities = 50/211 (23%), Positives = 78/211 (36%), Gaps = 27/211 (12%)
Frame = +1
Query: 130 GRSISDNLVTCGPHTCGVGAHCIHGSVRPV-CACLAGYSGDPLSQCIKIECLDNSECRSH 306
G++ N+ C P+ C G C H V C+C +G G I ++ C ++
Sbjct: 216 GQNCELNVDDCKPNPCQNGGTC-HDLVNSFSCSCPSGTLGYICE--INVDDCRPGACHNN 272
Query: 307 QTCVNQ----HCVNP-------CEGT---CGIN--ANCDVRNHIPV-----CTCPAGYTG 423
TC+++ C P CEG C N +N + + + C C G+ G
Sbjct: 273 GTCLDKVGGFECKCPPGFVGPRCEGDINECLSNPCSNAGTLDCVQLVNDYHCNCKLGFMG 332
Query: 424 NPFSSCRIADPEEACHPSPCGPNTKCHVANNQAICTCLPGYRGSPLSGCRHECESDGECG 603
S C SPC C + CTC G+ G ++C+S+ C
Sbjct: 333 RHCES-----KVNFCATSPCQNGGVCTTIHAGHKCTCPEGFYGKNCEFSGYDCDSN-PCQ 386
Query: 604 AQQSCR-----DFKCVSPCSDCGVNADCETV 681
CR + C P G N + +T+
Sbjct: 387 NGGVCRISDGGGYICDCPSGTNGTNCEIDTI 417
>AY453651-1|AAR89057.1| 199|Tribolium castaneum serrate protein.
Length = 199
Score = 33.1 bits (72), Expect = 0.002
Identities = 33/133 (24%), Positives = 47/133 (35%), Gaps = 5/133 (3%)
Frame = +1
Query: 334 NPCEGTCGINANC-DVRNHIPVCTCPAGYTGNPFSSCRIADPEEACHPSPCGPNTKCHVA 510
N CG + +C ++ C C G+TG + I D C +PC C
Sbjct: 32 NSAPSICGEHGHCVNLPGVGHRCQCQPGFTGK-YCHENIND----CKVNPCENGGTCVDK 86
Query: 511 NNQAICTCLPGYRGSPLSGCRHECESDGECGAQQSC----RDFKCVSPCSDCGVNADCET 678
N C C G+ G+ + +C S C SC DF+C C + C
Sbjct: 87 INAFQCICKEGWEGALCNINTDDC-SPNPCRNNGSCVDRIADFEC--NCKNGWKGKTCSL 143
Query: 679 VAAHRAVCKCPRG 717
+H C G
Sbjct: 144 KDSHCDHTTCKNG 156
Score = 29.1 bits (62), Expect = 0.040
Identities = 15/56 (26%), Positives = 23/56 (41%)
Frame = +1
Query: 148 NLVTCGPHTCGVGAHCIHGSVRPVCACLAGYSGDPLSQCIKIECLDNSECRSHQTC 315
N C P+ C C+ C C G+ G S +K D++ C++ TC
Sbjct: 106 NTDDCSPNPCRNNGSCVDRIADFECNCKNGWKGKTCS--LKDSHCDHTTCKNGGTC 159
Score = 22.2 bits (45), Expect = 4.6
Identities = 13/51 (25%), Positives = 18/51 (35%)
Frame = +1
Query: 160 CGPHTCGVGAHCIHGSVRPVCACLAGYSGDPLSQCIKIECLDNSECRSHQT 312
C TC G C +C C + G LSQ ++ C + T
Sbjct: 148 CDHTTCKNGGTCQDLGKTFMCRCPPDWEGTTLSQSPNRRRASSNPCHNGAT 198
>AJ621748-1|CAF21851.1| 228|Tribolium castaneum zinc finger
transcription factor protein.
Length = 228
Score = 24.2 bits (50), Expect = 1.1
Identities = 10/32 (31%), Positives = 15/32 (46%)
Frame = +1
Query: 619 RDFKCVSPCSDCGVNADCETVAAHRAVCKCPR 714
R + +S S+C N +C +R CK R
Sbjct: 31 RTYNNISSISECKNNGECVINKKNRTACKACR 62
>DQ138190-1|ABA03054.1| 135|Tribolium castaneum bursicon-like
protein protein.
Length = 135
Score = 23.0 bits (47), Expect = 2.6
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = +1
Query: 298 RSHQTCVNQHCVNPCEGTC 354
R + C + VN CEG+C
Sbjct: 45 RLQRICNGEVAVNKCEGSC 63
>AM292357-1|CAL23169.2| 355|Tribolium castaneum gustatory receptor
candidate 36 protein.
Length = 355
Score = 22.6 bits (46), Expect = 3.5
Identities = 10/32 (31%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Frame = +2
Query: 185 EHTASTEVFDLCALVWL--VTLAIRCLSVLKS 274
+HT S + D+C+L ++ +TL + LK+
Sbjct: 157 DHTESNIINDMCSLYYILQITLIVNYALALKN 188
Score = 21.8 bits (44), Expect = 6.0
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +1
Query: 187 AHCIHGSVRPVCACLAGY 240
A CI S+ + C+AGY
Sbjct: 233 AKCITSSLSSLYTCIAGY 250
>DQ414247-1|ABD63009.2| 414|Tribolium castaneum paired protein.
Length = 414
Score = 21.4 bits (43), Expect = 8.0
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = -2
Query: 562 SEGCLYNRVSRYR*PGYLRHGI 497
S GC+ ++RY+ G +R G+
Sbjct: 83 SHGCVSKILNRYQETGSIRPGV 104
>AM292376-1|CAL23188.2| 402|Tribolium castaneum gustatory receptor
candidate 55 protein.
Length = 402
Score = 21.4 bits (43), Expect = 8.0
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = -1
Query: 707 HLQTARCAATVSQSALTPQSLHGL 636
+L CA+T Q+ TP LH L
Sbjct: 304 YLLVYACASTCEQANDTPSILHEL 327
>AM292332-1|CAL23144.2| 344|Tribolium castaneum gustatory receptor
candidate 11 protein.
Length = 344
Score = 21.4 bits (43), Expect = 8.0
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = -1
Query: 707 HLQTARCAATVSQSALTPQSLHGL 636
+L CA+T Q+ TP LH L
Sbjct: 304 YLLVYACASTCEQANDTPSILHEL 327
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,456
Number of Sequences: 336
Number of extensions: 4287
Number of successful extensions: 30
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20131186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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