Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_N13
         (752 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    32   0.005
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    23   4.1  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           22   7.1  
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          22   7.1  

>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 32.3 bits (70), Expect = 0.005
 Identities = 15/55 (27%), Positives = 22/55 (40%), Gaps = 5/55 (9%)
 Frame = +1

Query: 451 DPEEACHPSPCGPNTKCHVANNQAICTCLPGYR-----GSPLSGCRHECESDGEC 600
           DP   C    C   TKC  A +  +C     ++     G+P+  C   C  D +C
Sbjct: 430 DPPIGCECKTCNSKTKCCFAQDDGLCPYTLKHKIRVPPGTPIYECNKRCNCDIDC 484


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 11/23 (47%), Positives = 11/23 (47%)
 Frame = -3

Query: 687 CRDGFTVSVNSAVAARAHTLEIP 619
           C  GFT S    V  R HT E P
Sbjct: 209 CGKGFTCSKQLKVHTRTHTGEKP 231


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 5/8 (62%), Positives = 6/8 (75%)
 Frame = -2

Query: 508 RHGIWCWD 485
           R  +WCWD
Sbjct: 454 RDSVWCWD 461


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -1

Query: 434 EKGFPVYPAGHVHTGMWLRTSQ 369
           EK  P+Y    +HT +W+  +Q
Sbjct: 77  EKRIPLYVCRVLHTTVWVAGAQ 98


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 207,407
Number of Sequences: 438
Number of extensions: 4647
Number of successful extensions: 13
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23632110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)