Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_N11
         (765 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    25   0.88 
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    23   2.0  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    23   2.7  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    23   3.5  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    23   3.5  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    23   3.5  

>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 24.6 bits (51), Expect = 0.88
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -1

Query: 576 NNIVIYDLERIRVLHEELFELLDA 505
           N +  YDL R+R  +  + EL+DA
Sbjct: 212 NKLNCYDLRRVRKNYNSICELVDA 235


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 8/16 (50%), Positives = 8/16 (50%)
 Frame = -3

Query: 508 CVARRCDAPAGRPGSC 461
           C    CD P  RPG C
Sbjct: 89  CPEPTCDEPVHRPGRC 104



 Score = 21.4 bits (43), Expect = 8.2
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = +2

Query: 434 KCPSRVSSVTGARPPRRCVTSPGN 505
           +CP         RP R C T PG+
Sbjct: 88  ECPEPTCDEPVHRPGRCCKTCPGD 111


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -1

Query: 327 RVDINIVPVYAEQRWVLSQELLEP 256
           + DINI  V +EQ+W +   ++ P
Sbjct: 365 KTDINITTVPSEQQWGILVLIIAP 388


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 12/43 (27%), Positives = 18/43 (41%)
 Frame = +3

Query: 435 SAHQESPRSQEPGLPAGASHLRATHQGVQRVPHEAP*YVPDHR 563
           S H +SP S++   P+    L    +        A  YVP +R
Sbjct: 215 SEHPDSPNSKKSATPSPPPQLEVNERKENLTCQPAVPYVPFYR 257


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = +1

Query: 61  LKHIGTNCRDMESMEYELARNLTLLFFVERLL 156
           L++I    ++ +S E  L RN+++ FFV  +L
Sbjct: 114 LQYIDEVLKNRDSHETNLLRNVSVQFFVYVIL 145


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = +1

Query: 61  LKHIGTNCRDMESMEYELARNLTLLFFVERLL 156
           L++I    ++ +S E  L RN+++ FFV  +L
Sbjct: 114 LQYIDEVLKNRDSHETNLLRNVSVQFFVYVIL 145


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,492
Number of Sequences: 336
Number of extensions: 4136
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20546262
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)