Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_N10
         (476 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        22   2.5  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    21   4.4  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    21   4.4  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   5.8  

>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 22.2 bits (45), Expect = 2.5
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = -2

Query: 235 ECPEWTCQWWMAPGVERNEGSQPFCGIIWR 146
           EC E T Q  +   V      + FC ++W+
Sbjct: 167 ECDEITIQAILEFSVTNPTIKEDFCAVLWK 196


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 4.4
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 152 NYSAKGLRTFITFYPRCH 205
           NYS K +R+   FY  C+
Sbjct: 5   NYSKKDIRSLSFFYKICN 22


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 4.4
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 152 NYSAKGLRTFITFYPRCH 205
           NYS K +R+   FY  C+
Sbjct: 5   NYSKKDIRSLSFFYKICN 22


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -2

Query: 409 YLFVKYLLIAQTIFKRR 359
           Y F  Y+++  T +KRR
Sbjct: 76  YCFNYYVIVVTTFYKRR 92


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,980
Number of Sequences: 336
Number of extensions: 1959
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11141978
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)