Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_N10
         (476 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding prote...    23   2.2  
AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding pro...    23   2.2  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   2.9  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    21   6.8  
AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      21   6.8  

>AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding protein
           ASP1 protein.
          Length = 144

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -3

Query: 405 CLLNIY*LLKQYLNVDVDIVIKLV 334
           CLL  + L+    NVD DI++ L+
Sbjct: 76  CLLEAFSLVDDEANVDEDIMLGLL 99


>AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding
           protein ASP1 protein.
          Length = 144

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -3

Query: 405 CLLNIY*LLKQYLNVDVDIVIKLV 334
           CLL  + L+    NVD DI++ L+
Sbjct: 76  CLLEAFSLVDDEANVDEDIMLGLL 99


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 14/58 (24%), Positives = 26/58 (44%)
 Frame = +1

Query: 160 RKRVENLHYVLPQVPSTIGKSIQGILAYDKTHSTASANITQGGIGFTFVNLRMKSERG 333
           RK++  L   +   P+ +  + +  +    T +     ITQ G G  F+ ++   ERG
Sbjct: 463 RKQISELESNMQISPNELKPNDKSQVIKQNTWTVFRDAITQTGTGPAFLTIKEWIERG 520


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +3

Query: 45  YISPRRCGDRRMRSP 89
           YI+   CGD R+ SP
Sbjct: 366 YINTAPCGDARIFSP 380


>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +3

Query: 273 HHSRWNRVHFRQSPY 317
           HH   ++V ++QSPY
Sbjct: 74  HHLHHHQVLYQQSPY 88


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,048
Number of Sequences: 438
Number of extensions: 2021
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12928545
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)