Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_F_N08
(839 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_1590 - 34640923-34641735,34642313-34642774,34643648-34643908 186 1e-47
10_08_0999 + 22121029-22121235,22121819-22122082,22122123-221223... 136 2e-32
01_06_0140 - 26881282-26881290,26882027-26882128,26882816-268829... 116 3e-26
01_01_1205 - 9693702-9694517,9694591-9695076,9697014-9697095,969... 107 8e-24
03_02_0854 - 11789850-11790524,11790602-11791063,11793119-11793328 104 1e-22
12_01_0297 - 2244793-2244945,2245337-2245396,2245529-2245628,224... 98 7e-21
07_01_0579 + 4299104-4299652,4300845-4300935,4301018-4301211,430... 97 2e-20
11_01_0296 - 2222329-2222481,2222777-2222836,2222965-2223064,222... 95 5e-20
11_01_0724 + 5981680-5981748,5982301-5982397,5982496-5982593,598... 82 5e-16
03_05_0640 - 26326832-26327166,26327295-26327529,26327665-263279... 43 3e-04
02_01_0510 + 3703715-3705040 30 2.0
08_02_1064 - 24033941-24034127,24034432-24034476,24035355-240354... 29 3.5
07_01_0989 + 8348706-8348882,8348988-8349028,8350071-8350120,835... 29 4.6
07_01_0724 + 5529642-5531141 29 4.6
01_06_0018 + 25609571-25611061 29 4.6
01_01_0840 - 6557931-6558377 29 6.1
12_02_1084 - 25928373-25928426,25928551-25928652,25928913-259290... 28 8.1
11_06_0513 + 24466131-24469487 28 8.1
10_08_0625 + 19362303-19363853 28 8.1
05_01_0019 - 129767-129931,130078-130257,130491-130728,130833-13... 28 8.1
>04_04_1590 - 34640923-34641735,34642313-34642774,34643648-34643908
Length = 511
Score = 186 bits (454), Expect = 1e-47
Identities = 100/215 (46%), Positives = 138/215 (64%), Gaps = 3/215 (1%)
Frame = +1
Query: 202 IDSKSSYIRLSGIICTIGPASRNVAVLEKMMETGMNVARMNFSHGSHEYHAETIRNCREA 381
+++ + + + ++CT+GPASR+V +LEK++ GMNVAR NFSHG+HEYH ET+ N R+A
Sbjct: 13 LENDDARVPKTKLVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYHQETLDNLRQA 72
Query: 382 EKSYSAKLGSPFSLAIALDTKGPEIRTGLLEGGGSAEVELKKGETIKLTTSPDYQEKGNA 561
+ + A+ LDTKGPEIRTG L+ G ++L KG+ + +TT DY+ KG+
Sbjct: 73 MHN------TGVLCAVMLDTKGPEIRTGFLKDG--KPIKLTKGQELTVTT--DYEIKGDE 122
Query: 562 DTIYVDYKNITNVVKPGNRIFIDDGLISIICQSV--SADTLTCTIENGGMLGSRKGVNLP 735
+ I + YK + VKPGN I DG IS+ S A T+ C EN MLG RK NLP
Sbjct: 123 NMITMSYKKLPVDVKPGNVILCADGTISLTVLSCDPKAGTVRCRCENTAMLGERKNCNLP 182
Query: 736 GIPVDLPAVSXKDKSDLL-FGVEQGVDMIFASFIR 837
GI VDLP ++ KDK D+L +GV +DMI SF+R
Sbjct: 183 GIVVDLPTLTEKDKEDILGWGVPNDIDMIALSFVR 217
>10_08_0999 +
22121029-22121235,22121819-22122082,22122123-22122324,
22122456-22122590,22122668-22122778,22122871-22122959,
22123237-22123299,22123461-22123636,22123785-22123887,
22124286-22124461,22124625-22124733,22124851-22124943,
22126294-22126435,22126655-22126671
Length = 628
Score = 136 bits (329), Expect = 2e-32
Identities = 79/212 (37%), Positives = 123/212 (58%), Gaps = 8/212 (3%)
Frame = +1
Query: 226 RLSGIICTIGPASRNVAVLEKMMETGMNVARMNFSHGSHEYHAETIRNCREAEKSYSAKL 405
R + I+CTIGP++ ++ K+ ETGMNVARMN SHG H+ H + I + K Y+AK
Sbjct: 89 RKTKIVCTIGPSTNTREMIWKLAETGMNVARMNMSHGDHQSHQKVI----DLVKEYNAKN 144
Query: 406 GSPFSLAIALDTK--GPEIRTGLLEG-----GGSAE-VELKKGETIKLTTSPDYQEKGNA 561
+AI LDTK + RT +++G G E + L++G+ T K
Sbjct: 145 TDGNVIAIMLDTKQMSCDDRTSVMQGPEVRSGDVPEPIMLEEGQEFNFTIKRGVSTK--- 201
Query: 562 DTIYVDYKNITNVVKPGNRIFIDDGLISIICQSVSADTLTCTIENGGMLGSRKGVNLPGI 741
DT+ V+Y + N V+ G+ + +D G++S+ +S +ADT+ C + +GG L SR+ +N+ G
Sbjct: 202 DTVSVNYDDFINDVEVGDILLVDGGMMSLAVKSKTADTVKCEVVDGGELKSRRHLNVRGK 261
Query: 742 PVDLPAVSXKDKSDLLFGVEQGVDMIFASFIR 837
LP+++ KD D+ FGVE GVD SF++
Sbjct: 262 SATLPSITEKDWEDIKFGVENGVDFYAVSFVK 293
>01_06_0140 -
26881282-26881290,26882027-26882128,26882816-26882924,
26883712-26883860,26883941-26884043,26884635-26884810,
26885004-26885066,26885258-26885346,26885428-26885538,
26885610-26885744,26886415-26886580,26886788-26886856,
26886943-26887230,26888612-26888866
Length = 607
Score = 116 bits (278), Expect = 3e-26
Identities = 74/226 (32%), Positives = 121/226 (53%), Gaps = 16/226 (7%)
Frame = +1
Query: 208 SKSSYIRLSGIICTIGPASRNVAVLEKMMETGMNVARMNFSHGSHEYHAETIRNCREAEK 387
SK + R + I+CTIGP++ ++ K+ E GMNVAR+N SHG H H + I + K
Sbjct: 108 SKPNVRRKTKIVCTIGPSTNTKEMIWKLAEAGMNVARLNMSHGDHASHQKVI----DLVK 163
Query: 388 SYSAKLGSPFSLAIALDTKG-PEIRTGLLE-------GGGSAEVELKKGET---IKLTTS 534
Y+A+ +AI LDTK E +LE G E++ G+ I L T
Sbjct: 164 EYNAQTKDNV-IAIMLDTKSYTEYDVLMLECFFAVYASSGGIGPEVRSGDLPQPIMLETG 222
Query: 535 PDY-----QEKGNADTIYVDYKNITNVVKPGNRIFIDDGLISIICQSVSADTLTCTIENG 699
++ + G + V+Y + N V+ G+ + +D G++S++ +S + D++ C + +G
Sbjct: 223 QEFTFTIKRGVGTETCVSVNYDDFVNDVEVGDMLLVDGGMMSLLVKSKTEDSVKCEVIDG 282
Query: 700 GMLGSRKGVNLPGIPVDLPAVSXKDKSDLLFGVEQGVDMIFASFIR 837
G L SR+ +N+ G LP+++ KD D+ FGVE VD SF++
Sbjct: 283 GELKSRRHLNVRGKSATLPSITDKDWDDIKFGVENQVDYYAVSFVK 328
>01_01_1205 -
9693702-9694517,9694591-9695076,9697014-9697095,
9697876-9698051,9698326-9698580
Length = 604
Score = 107 bits (258), Expect = 8e-24
Identities = 62/138 (44%), Positives = 83/138 (60%), Gaps = 3/138 (2%)
Frame = +1
Query: 433 LDTKGPEIRTGLLEGGGSAEVELKKGETIKLTTSPDYQEKGNADTIYVDYKNITNVVKPG 612
L +GPEIRTG L+ G V+LKKG+ I T S DY KG+ + I + YK + +KPG
Sbjct: 176 LKIQGPEIRTGFLKDG--KPVQLKKGQEI--TVSTDYSIKGDDNMISMSYKKLAVDLKPG 231
Query: 613 NRIFIDDGLISIICQSVSADT--LTCTIENGGMLGSRKGVNLPGIPVDLPAVSXKDKSDL 786
+ I DG I++ + + C EN MLG RK VNLPG+ VDLP ++ KDK D+
Sbjct: 232 SVILCADGTITLTVLHCDKEQGLVRCRCENTAMLGERKNVNLPGVIVDLPTLTEKDKEDI 291
Query: 787 L-FGVEQGVDMIFASFIR 837
L +GV +DMI SF+R
Sbjct: 292 LKWGVPNKIDMIALSFVR 309
Score = 74.9 bits (176), Expect = 7e-14
Identities = 37/78 (47%), Positives = 51/78 (65%)
Frame = +1
Query: 238 IICTIGPASRNVAVLEKMMETGMNVARMNFSHGSHEYHAETIRNCREAEKSYSAKLGSPF 417
I+CT+GPASR+V ++ +++ GM VAR NFSHGSHEYH ET+ N R A +S +
Sbjct: 23 IVCTLGPASRSVEMIGRLLRAGMCVARFNFSHGSHEYHQETLDNLRAAMES------TGI 76
Query: 418 SLAIALDTKGPEIRTGLL 471
A+ LDTK + G+L
Sbjct: 77 LCAVMLDTKARDFVLGVL 94
>03_02_0854 - 11789850-11790524,11790602-11791063,11793119-11793328
Length = 448
Score = 104 bits (249), Expect = 1e-22
Identities = 58/134 (43%), Positives = 81/134 (60%), Gaps = 3/134 (2%)
Frame = +1
Query: 445 GPEIRTGLLEGGGSAEVELKKGETIKLTTSPDYQEKGNADTIYVDYKNITNVVKPGNRIF 624
GPEIRTG L+ G ++LK+G+ I +T DY KG+ + I + Y + +KPG+ I
Sbjct: 71 GPEIRTGFLKDG--KPIQLKQGKEITITI--DYSIKGDENLISMSYHKLAIDLKPGSTIL 126
Query: 625 IDDGLISIICQSVSADT--LTCTIENGGMLGSRKGVNLPGIPVDLPAVSXKDKSDLL-FG 795
DG I++ S + + C EN MLG RK VNLPG+ VDLP ++ KDK D+L +G
Sbjct: 127 CADGTITLTVLSCDCEQGLVRCRCENSAMLGERKNVNLPGVIVDLPTLTEKDKVDILQWG 186
Query: 796 VEQGVDMIFASFIR 837
V +DMI SF+R
Sbjct: 187 VPNKIDMIALSFVR 200
>12_01_0297 -
2244793-2244945,2245337-2245396,2245529-2245628,
2245712-2245779,2245922-2246017,2246156-2246244,
2246320-2246464,2246643-2246732,2246816-2246887,
2247052-2247132,2247361-2247492,2247613-2247690,
2247930-2248085,2248227-2248324,2248418-2248499
Length = 499
Score = 98.3 bits (234), Expect = 7e-21
Identities = 65/213 (30%), Positives = 112/213 (52%), Gaps = 10/213 (4%)
Frame = +1
Query: 229 LSGIICTIGPASRNVAVLEKMMETGMNVARMNFSHGSHEYHAETIRNCREAEKSYSAKLG 408
++ I+ T+GP SR+V + ++ GM+VAR +FS G EYH ET+ N + A KS + KL
Sbjct: 1 MTKIVGTLGPKSRSVDTISSCLKAGMSVARFDFSWGDAEYHQETLENLKVAIKS-TKKL- 58
Query: 409 SPFSLAIALDTKGPEIRTGLLEGGGSAEVELKKGETIKLTTSPDYQEKGNADTIYVDYKN 588
A+ LDT GPE++ + A + L++ T+ LT PD ++ ++ + +++
Sbjct: 59 ----CAVMLDTVGPELQ---VVNKSEASISLEENGTVILT--PDQGQEASSQVLPINFAG 109
Query: 589 ITNVVKPGNRIFIDDGLIS--------IICQSVSADTLTCTIENGGML-GSRKGVNLPGI 741
+ VKPG+ IF+ L + + + D + C I+N L GS ++ I
Sbjct: 110 LAKAVKPGDTIFVGQYLFTGSETTSVWLEVSQIKGDDVVCVIKNTATLAGSLFTLHCSQI 169
Query: 742 PVDLPAVSXKDKSDL-LFGVEQGVDMIFASFIR 837
+DLP +S +DK + +G +D + S+ R
Sbjct: 170 HIDLPTLSDEDKEVIRKWGAPNKIDFLSLSYTR 202
>07_01_0579 +
4299104-4299652,4300845-4300935,4301018-4301211,
4301501-4301622,4302378-4302856,4303033-4303334
Length = 578
Score = 97.1 bits (231), Expect = 2e-20
Identities = 65/211 (30%), Positives = 103/211 (48%), Gaps = 7/211 (3%)
Frame = +1
Query: 226 RLSGIICTIGPASRNVAVLEKMMETGMNVARMNFSHGSHEYHAETIRNCREAEKSYSAKL 405
R + ++CT+GPA+ LE + GMNVAR+N HG E+H IR R +
Sbjct: 99 RRTKLVCTVGPATCGADELEALAVGGMNVARVNMCHGDREWHRGVIRAVRRLNEE----- 153
Query: 406 GSPFSLAIALDTKGPEIRTGLLEGGGSAEVELKKGETIKLTTSPDYQEKGNADTIYVDYK 585
F++A+ +DT+G EI G L GG+A + + GE I + ++ TI+V+Y+
Sbjct: 154 -KGFAVAVMMDTEGSEIHMGDL--GGAAAAKAEDGE-IWTFSVRSFEAPPPERTIHVNYE 209
Query: 586 NITNVVKPGNRIFIDDGLISIICQSVSADTLTCTIENGGMLGSRKGVNL--PGIPVD--- 750
V+ G+ + +D G+ + C + G+L R + G V
Sbjct: 210 GFAEDVRVGDELLVDGGMARFEVVEKLGPDVKCRCTDPGLLLPRANLTFWRDGSIVRERN 269
Query: 751 --LPAVSXKDKSDLLFGVEQGVDMIFASFIR 837
LP +S KD D+ FG+ +GVD I SF++
Sbjct: 270 AMLPTISSKDWLDIDFGISEGVDFIAVSFVK 300
>11_01_0296 -
2222329-2222481,2222777-2222836,2222965-2223064,
2223152-2223219,2223369-2223464,2223603-2223691,
2223762-2223906,2224100-2224189,2224271-2224342,
2224543-2224623,2224766-2224897,2225026-2225103,
2225280-2225435,2225521-2225618,2225712-2225793
Length = 499
Score = 95.5 bits (227), Expect = 5e-20
Identities = 65/213 (30%), Positives = 110/213 (51%), Gaps = 10/213 (4%)
Frame = +1
Query: 229 LSGIICTIGPASRNVAVLEKMMETGMNVARMNFSHGSHEYHAETIRNCREAEKSYSAKLG 408
++ I+ T+GP SR V + ++ GM+VAR +FS G EYH ET+ N + A KS + KL
Sbjct: 1 MTKIVGTLGPKSRAVDTISSCLKAGMSVARFDFSWGDAEYHQETLENLKLAIKS-TKKL- 58
Query: 409 SPFSLAIALDTKGPEIRTGLLEGGGSAEVELKKGETIKLTTSPDYQEKGNADTIYVDYKN 588
A+ LDT GPE++ + A + L+ T+ LT PD ++ +++ + +++
Sbjct: 59 ----CAVMLDTVGPELQ---VVNKSEAAISLEANGTVVLT--PDQGQEASSELLPINFSG 109
Query: 589 ITNVVKPGNRIFIDDGLIS--------IICQSVSADTLTCTIENGGML-GSRKGVNLPGI 741
+ +KPG IF+ L + + V D + C I+N L GS ++ I
Sbjct: 110 LAKALKPGATIFVGQYLFTGSETTSVWLEVSEVKGDDVVCVIKNSATLAGSLFTLHCSQI 169
Query: 742 PVDLPAVSXKDKSDL-LFGVEQGVDMIFASFIR 837
+DLP +S +DK + +G +D + S+ R
Sbjct: 170 HIDLPTLSDEDKEVIRRWGAPNKIDFLSLSYTR 202
>11_01_0724 +
5981680-5981748,5982301-5982397,5982496-5982593,
5983535-5983690,5983986-5984063,5984135-5984266,
5984856-5984936,5985442-5985510,5985597-5985686,
5986001-5986145,5986218-5986276,5986384-5986479,
5986561-5986628,5986704-5986803,5986910-5986966,
5987179-5987337
Length = 517
Score = 82.2 bits (194), Expect = 5e-16
Identities = 63/213 (29%), Positives = 105/213 (49%), Gaps = 10/213 (4%)
Frame = +1
Query: 229 LSGIICTIGPASRNVAVLEKMMETGMNVARMNFSHGSHEYHAETIRNCREAEKSYSAKLG 408
L+ I+ T+GP S +V V+++ + GM VAR +FS YH ET+ N R+A ++ + KL
Sbjct: 29 LTKIVGTLGPNSHSVEVIQECLTAGMAVARFDFSWMDASYHQETLNNLRKAAQNVN-KL- 86
Query: 409 SPFSLAIALDTKGPEIRTGLLEGGGSAEVELKKGETIKLTTSPDYQEKGNADTIYVDYKN 588
+ LDT GPEI+ GG +ELK G + +T PD + +++ + + +
Sbjct: 87 ----CPVMLDTLGPEIQVHNSTGG---PIELKAGNHVTIT--PDLSKAPSSEILPIKFGG 137
Query: 589 ITNVVKPGNRIFIDDGLIS--------IICQSVSADTLTCTIENGGML-GSRKGVNLPGI 741
+ VK G+ +FI L + + S + + C + N L G +++
Sbjct: 138 LAKAVKKGDTLFIGQYLFTGSETTSSWLEVVETSGENVECLVTNTATLAGPMFTLHVSKA 197
Query: 742 PVDLPAVSXKDKSDL-LFGVEQGVDMIFASFIR 837
V LP +S DK + +G+ VD+I S R
Sbjct: 198 HVSLPTLSDYDKEVISTWGLHNSVDIISLSHTR 230
>03_05_0640 - 26326832-26327166,26327295-26327529,26327665-26327908,
26328389-26328507,26328860-26329050,26329133-26329220,
26331653-26331715,26331816-26333944,26334084-26334186
Length = 1168
Score = 42.7 bits (96), Expect = 3e-04
Identities = 29/98 (29%), Positives = 53/98 (54%), Gaps = 7/98 (7%)
Frame = +1
Query: 565 TIYVDYKNITNVVKPGNRIFIDDGLISI-ICQSVSADTLTCTIENGGMLGSRKGVNL--P 735
T++V++ + + G+ + ID G+ + + + V D L C + G+L R ++
Sbjct: 784 TMHVNFDKFSEDILVGDELVIDGGMATFEVIEKVGND-LRCKCTDPGLLLPRAKLSFWRN 842
Query: 736 GIPVD----LPAVSXKDKSDLLFGVEQGVDMIFASFIR 837
G V+ LP +S KD +D+ FG+ +GVD I SF++
Sbjct: 843 GKLVERNFGLPTLSAKDWADIEFGIAEGVDCIALSFVK 880
>02_01_0510 + 3703715-3705040
Length = 441
Score = 30.3 bits (65), Expect = 2.0
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +2
Query: 410 HPSLWPSHWTLKD 448
HP LWP HW +KD
Sbjct: 192 HPFLWPDHWPVKD 204
>08_02_1064 -
24033941-24034127,24034432-24034476,24035355-24035421,
24035521-24035600,24035691-24035769,24035864-24035939
Length = 177
Score = 29.5 bits (63), Expect = 3.5
Identities = 22/75 (29%), Positives = 32/75 (42%), Gaps = 2/75 (2%)
Frame = +1
Query: 301 GMNVARMNFSHGSHEY--HAETIRNCREAEKSYSAKLGSPFSLAIALDTKGPEIRTGLLE 474
G NV N +Y +AE IR R E+ ++ SP+ L L G E+ T +
Sbjct: 79 GRNVDGRNIMVQFAKYGPNAEPIRKGRIIEEVEKSRDSSPWDLWYLLFQSGTEMTTEIEN 138
Query: 475 GGGSAEVELKKGETI 519
G E +KG +
Sbjct: 139 AGAEVAAEAEKGMAV 153
>07_01_0989 +
8348706-8348882,8348988-8349028,8350071-8350120,
8350502-8350646,8351570-8351626,8352141-8352261,
8352436-8352945,8353242-8353289
Length = 382
Score = 29.1 bits (62), Expect = 4.6
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -1
Query: 482 PPPSKSPVLISGPLVSNAMAKEKGEPSL 399
PPP+ SP L S P+ S +++EK +L
Sbjct: 335 PPPNPSPSLASAPVYSPVLSREKVRDAL 362
>07_01_0724 + 5529642-5531141
Length = 499
Score = 29.1 bits (62), Expect = 4.6
Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = +3
Query: 279 AREDDGDGNERGKDELLARFPRVPRRDHSQL-SRGREELQ 395
AR+DDGDG+ RG+D + A RV + ++ +R E+Q
Sbjct: 434 ARDDDGDGSFRGED-VAAAVRRVMAEEEGKVFARNAREMQ 472
>01_06_0018 + 25609571-25611061
Length = 496
Score = 29.1 bits (62), Expect = 4.6
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Frame = -1
Query: 818 IISTPCSTPKSRSDLSXSETAGRSTGMPG---RLTPFRDPSIPP 696
I++TP + RS + + A R TG P L PF D +PP
Sbjct: 43 ILTTPVNAAVIRSAVDRANDASRGTGSPEISITLFPFPDVGLPP 86
>01_01_0840 - 6557931-6558377
Length = 148
Score = 28.7 bits (61), Expect = 6.1
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +3
Query: 294 GDGNERGKDELLARFPRVPRRDHSQLSR 377
GDG RG+D L R+P + RR S +R
Sbjct: 120 GDGKRRGRDGGLRRWPGMTRRRRSSSAR 147
>12_02_1084 -
25928373-25928426,25928551-25928652,25928913-25929039,
25929292-25930730,25931430-25931447
Length = 579
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +1
Query: 211 KSSYIRLSGIICTIGPASRNVAVLEK 288
K + IRL+ IIC P + VAVL+K
Sbjct: 481 KRNEIRLTNIICQFNPLVQQVAVLKK 506
>11_06_0513 + 24466131-24469487
Length = 1118
Score = 28.3 bits (60), Expect = 8.1
Identities = 24/94 (25%), Positives = 43/94 (45%)
Frame = +1
Query: 124 MAFAGAVEKPTVANVGSQLQHMCGLDIDSKSSYIRLSGIICTIGPASRNVAVLEKMMETG 303
+++AG +AN QL+ + + I IRL + C+ P + LE + +G
Sbjct: 874 ISYAGETFPCWMANTNPQLKKLTQIRI------IRLINLKCSSLPPLGQLHQLETLEISG 927
Query: 304 MNVARMNFSHGSHEYHAETIRNCREAEKSYSAKL 405
MN + S E +A+T R+ ++ S+ L
Sbjct: 928 MNAIKNVSSELHGELNADTFRSLKKIVFSHMVNL 961
>10_08_0625 + 19362303-19363853
Length = 516
Score = 28.3 bits (60), Expect = 8.1
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = +1
Query: 484 SAEVELKK--GETIKLTTSPDYQEKGNADTIYVDYKNITNVVKPGNRIFIDDGLISIICQ 657
+A E KK GET K T E DT+ +D K + + GNR DD +I + +
Sbjct: 256 NARREYKKHGGETTKTTNKETTLEHSYVDTL-LDIK----LPEDGNRALTDDEIIKLCSE 310
Query: 658 SVSADTLT 681
++A T T
Sbjct: 311 FLNAGTDT 318
>05_01_0019 -
129767-129931,130078-130257,130491-130728,130833-131236,
131284-131427,131709-131995,132071-132150,132563-132714,
132793-132909,133292-133450,133546-133946,134106-134423,
135050-135095,135203-135310
Length = 932
Score = 28.3 bits (60), Expect = 8.1
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = -3
Query: 276 SYITGCRSNSTDYSRETNVRRLGVNVEAAHMLELGADVGDCRLFNCTRESHGYV 115
S I+ S + SR VR + N+E + + L GD R+ + + HG+V
Sbjct: 256 SQISSGHSINKQPSRTLVVRNITANIEDSDLTVLFQQYGDIRMLYTSFKHHGFV 309
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,727,668
Number of Sequences: 37544
Number of extensions: 490944
Number of successful extensions: 1714
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1628
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1695
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2326952232
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -