Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_N08
         (839 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          27   0.22 
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    23   2.7  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    23   2.7  
DQ325077-1|ABD14091.1|  181|Apis mellifera complementary sex det...    23   3.5  
DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex det...    23   3.5  
AY569720-1|AAS86673.1|  406|Apis mellifera complementary sex det...    23   4.6  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    22   6.1  
AY352276-1|AAQ67417.1|  385|Apis mellifera complementary sex det...    22   8.1  

>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 27.1 bits (57), Expect = 0.22
 Identities = 24/94 (25%), Positives = 38/94 (40%), Gaps = 2/94 (2%)
 Frame = +3

Query: 492 SRTEEGRDYKVDNKSGLSRERQC*YNLRGLQEHNECREARKPNLHRRWP-HLYHLSVGQR 668
           SR E+G  Y+ D +   SR+R   Y  +  + +++     + +L  R     Y  S  + 
Sbjct: 237 SRHEDGNSYRNDGERSCSRDRSREYKKKD-RRYDQLHNVEEKHLRERTSRRRYSRSRERE 295

Query: 669 *HSYVYH*K-RRYARIPERRQPARHTRGPTRSLR 767
             SY    + R Y      R   R  RG +R  R
Sbjct: 296 QKSYKNEREYREYRETSRERSRDRRERGRSREHR 329


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = -1

Query: 272 TLRDAGPIVQIIPERRMYEDLESMSRPHICWSWEPT 165
           +++ A  IV I PER    D E       CWS EP+
Sbjct: 809 SVKKALMIVGIRPERLPSFDDECWRLMEQCWSGEPS 844


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = -1

Query: 272 TLRDAGPIVQIIPERRMYEDLESMSRPHICWSWEPT 165
           +++ A  IV I PER    D E       CWS EP+
Sbjct: 847 SVKKALMIVGIRPERLPSFDDECWRLMEQCWSGEPS 882


>DQ325077-1|ABD14091.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +3

Query: 474 RRRLS*SRTEEGRDYKVDNKSGLSRER 554
           R+R S SR  E + YK + K    RER
Sbjct: 36  RKRYSRSREREQKSYKNERKYRKYRER 62


>DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex
           determiner protein.
          Length = 191

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +3

Query: 474 RRRLS*SRTEEGRDYKVDNKSGLSRER 554
           R+R S SR  E + YK + K    RER
Sbjct: 36  RKRYSRSREREQKSYKNERKYRKYRER 62


>AY569720-1|AAS86673.1|  406|Apis mellifera complementary sex
           determiner protein.
          Length = 406

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +3

Query: 474 RRRLS*SRTEEGRDYKVDNKSGLSRE 551
           R+R S SR  E R YK +N     RE
Sbjct: 269 RKRYSRSREREQRSYKNENSYRKYRE 294


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 10/24 (41%), Positives = 13/24 (54%), Gaps = 1/24 (4%)
 Frame = +2

Query: 686 PLKTEVCS-DPGKASTCPAYPWTY 754
           PL +E      G AS C A+PW +
Sbjct: 276 PLSSEATDLRMGVASFCKAFPWHF 299


>AY352276-1|AAQ67417.1|  385|Apis mellifera complementary sex
           determiner protein.
          Length = 385

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 16/46 (34%), Positives = 20/46 (43%)
 Frame = +3

Query: 474 RRRLS*SRTEEGRDYKVDNKSGLSRERQC*YNLRGLQEHNECREAR 611
           R+R S SR  E + YK +N     RE       R  +E    RE R
Sbjct: 269 RKRYSRSREREQKSYKNENSYRKYRETSK-ERSRDRRERGRSREHR 313


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 222,805
Number of Sequences: 438
Number of extensions: 4916
Number of successful extensions: 40
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26945694
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)