Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_N06
         (802 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    25   0.53 
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          23   2.1  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    22   5.0  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   8.7  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   8.7  

>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 25.4 bits (53), Expect = 0.53
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +1

Query: 562 VKLGEYPTWMFFQCFCAMTLFYCAHWQ 642
           +K GE    +FF  FC +  F   +WQ
Sbjct: 1   MKPGELKRVLFFFSFCCILFFIYLYWQ 27


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -1

Query: 532 QWICCHIHDQTILPK 488
           QWI  +I+DQ I+P+
Sbjct: 510 QWILDNIYDQLIMPR 524


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = -1

Query: 115 Y*TNYSPIFYYSQNXYAQFTSHHHXH 38
           Y   YSP F   Q  Y+Q+ S    H
Sbjct: 214 YQREYSPTFTQQQTQYSQYGSWFLPH 239


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 11/37 (29%), Positives = 13/37 (35%)
 Frame = +1

Query: 394 WACALCALGVFVYQSLDAIDGKQARRTGSQSPLGELF 504
           W C L  LG+   Q  +  D   A       P  E F
Sbjct: 7   WLCCLLLLGIAFAQEEEGGDEATADELCENRPADEYF 43


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 11/37 (29%), Positives = 13/37 (35%)
 Frame = +1

Query: 394 WACALCALGVFVYQSLDAIDGKQARRTGSQSPLGELF 504
           W C L  LG+   Q  +  D   A       P  E F
Sbjct: 7   WLCCLLLLGIAFAQEEEGGDEATADELCENRPADEYF 43


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,646
Number of Sequences: 336
Number of extensions: 4114
Number of successful extensions: 15
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21791490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)