Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_F_N02
(831 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC003417-1|AAH03417.1| 355|Homo sapiens NADH dehydrogenase (ubi... 134 3e-31
AF087854-1|AAP97164.1| 354|Homo sapiens NADH dehydrogenase prot... 134 3e-31
AF087661-1|AAD09755.1| 355|Homo sapiens NADH-ubiquinone oxidore... 134 3e-31
AC013469-3|AAY14737.1| 333|Homo sapiens unknown protein. 134 3e-31
AB209440-1|BAD92677.1| 241|Homo sapiens NADH dehydrogenase (ubi... 131 3e-30
BC031332-1|AAH31332.1| 201|Homo sapiens NDUFA10 protein protein. 101 4e-21
AF453834-1|AAL50984.1| 429|Homo sapiens NADH dehydrogenase ubiq... 101 4e-21
>BC003417-1|AAH03417.1| 355|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 alpha subcomplex, 10, 42kDa protein.
Length = 355
Score = 134 bits (325), Expect = 3e-31
Identities = 78/193 (40%), Positives = 110/193 (56%), Gaps = 3/193 (1%)
Frame = +3
Query: 258 WLRSLIDRTTHRFDDNSKVIIVEGPVAAGKTAFAASLADDLGMKHFPEANMDLHY---IR 428
W L D+ + R + S+VI V+G + GK A +A+ LG KHFPEA +HY
Sbjct: 41 WHFLLGDKASKRLTERSRVITVDGNICTGKGKLAKEIAEKLGFKHFPEAG--IHYPDSTT 98
Query: 429 PNGVDLRSFDDQVPEDTRTFDHVNFNQNPNHRLAANFQIMMYVARYSQYIDALAHLFNTG 608
+G L + + + +D N ++RL Q +Y +R QY DAL HL TG
Sbjct: 99 GDGKPLATDYNGNCSLEKFYDDPRSNDGNSYRL----QSWLYSSRLLQYSDALEHLLTTG 154
Query: 609 QGIVLERSPYSDFVFLEAMYSXKFLSKAVRSTYYELRENTIEELMRPHLXIYLDLPVSKV 788
QG+VLERS +SDFVFLEAMY+ F+ K Y E++ TI + + PHL IY+D+PV +V
Sbjct: 155 QGVVLERSIFSDFVFLEAMYNQGFIRKQCVDHYNEVKSVTICDYLPPHLVIYIDVPVPEV 214
Query: 789 QEAIKKRALXHEV 827
Q I+K+ HE+
Sbjct: 215 QRRIQKKGDPHEM 227
>AF087854-1|AAP97164.1| 354|Homo sapiens NADH dehydrogenase
protein.
Length = 354
Score = 134 bits (325), Expect = 3e-31
Identities = 78/193 (40%), Positives = 110/193 (56%), Gaps = 3/193 (1%)
Frame = +3
Query: 258 WLRSLIDRTTHRFDDNSKVIIVEGPVAAGKTAFAASLADDLGMKHFPEANMDLHY---IR 428
W L D+ + R + S+VI V+G + GK A +A+ LG KHFPEA +HY
Sbjct: 40 WHFLLGDKASKRLTERSRVITVDGNICTGKGKLAKEIAEKLGFKHFPEAG--IHYPDSTT 97
Query: 429 PNGVDLRSFDDQVPEDTRTFDHVNFNQNPNHRLAANFQIMMYVARYSQYIDALAHLFNTG 608
+G L + + + +D N ++RL Q +Y +R QY DAL HL TG
Sbjct: 98 GDGKPLATDYNGNCSLEKFYDDPRSNDGNSYRL----QSWLYSSRLLQYSDALEHLLTTG 153
Query: 609 QGIVLERSPYSDFVFLEAMYSXKFLSKAVRSTYYELRENTIEELMRPHLXIYLDLPVSKV 788
QG+VLERS +SDFVFLEAMY+ F+ K Y E++ TI + + PHL IY+D+PV +V
Sbjct: 154 QGVVLERSIFSDFVFLEAMYNQGFIRKQCVDHYNEVKSVTICDYLPPHLVIYIDVPVPEV 213
Query: 789 QEAIKKRALXHEV 827
Q I+K+ HE+
Sbjct: 214 QRRIQKKGDPHEM 226
>AF087661-1|AAD09755.1| 355|Homo sapiens NADH-ubiquinone
oxidoreductase 42 kDa subunit protein.
Length = 355
Score = 134 bits (325), Expect = 3e-31
Identities = 78/193 (40%), Positives = 110/193 (56%), Gaps = 3/193 (1%)
Frame = +3
Query: 258 WLRSLIDRTTHRFDDNSKVIIVEGPVAAGKTAFAASLADDLGMKHFPEANMDLHY---IR 428
W L D+ + R + S+VI V+G + GK A +A+ LG KHFPEA +HY
Sbjct: 41 WHFLLGDKASKRLTERSRVITVDGNICTGKGKLAKEIAEKLGFKHFPEAG--IHYPDSTT 98
Query: 429 PNGVDLRSFDDQVPEDTRTFDHVNFNQNPNHRLAANFQIMMYVARYSQYIDALAHLFNTG 608
+G L + + + +D N ++RL Q +Y +R QY DAL HL TG
Sbjct: 99 GDGKPLATDYNGNCSLEKFYDDPRSNDGNSYRL----QSWLYSSRLLQYSDALEHLLTTG 154
Query: 609 QGIVLERSPYSDFVFLEAMYSXKFLSKAVRSTYYELRENTIEELMRPHLXIYLDLPVSKV 788
QG+VLERS +SDFVFLEAMY+ F+ K Y E++ TI + + PHL IY+D+PV +V
Sbjct: 155 QGVVLERSIFSDFVFLEAMYNQGFIRKQCVDHYNEVKSVTICDYLPPHLVIYIDVPVPEV 214
Query: 789 QEAIKKRALXHEV 827
Q I+K+ HE+
Sbjct: 215 QRRIQKKGDPHEM 227
>AC013469-3|AAY14737.1| 333|Homo sapiens unknown protein.
Length = 333
Score = 134 bits (325), Expect = 3e-31
Identities = 78/193 (40%), Positives = 110/193 (56%), Gaps = 3/193 (1%)
Frame = +3
Query: 258 WLRSLIDRTTHRFDDNSKVIIVEGPVAAGKTAFAASLADDLGMKHFPEANMDLHY---IR 428
W L D+ + R + S+VI V+G + GK A +A+ LG KHFPEA +HY
Sbjct: 41 WHFLLGDKASKRLTERSRVITVDGNICTGKGKLAKEIAEKLGFKHFPEAG--IHYPDSTT 98
Query: 429 PNGVDLRSFDDQVPEDTRTFDHVNFNQNPNHRLAANFQIMMYVARYSQYIDALAHLFNTG 608
+G L + + + +D N ++RL Q +Y +R QY DAL HL TG
Sbjct: 99 GDGKPLATDYNGNCSLEKFYDDPRSNDGNSYRL----QSWLYSSRLLQYSDALEHLLTTG 154
Query: 609 QGIVLERSPYSDFVFLEAMYSXKFLSKAVRSTYYELRENTIEELMRPHLXIYLDLPVSKV 788
QG+VLERS +SDFVFLEAMY+ F+ K Y E++ TI + + PHL IY+D+PV +V
Sbjct: 155 QGVVLERSIFSDFVFLEAMYNQGFIRKQCVDHYNEVKSVTICDYLPPHLVIYIDVPVPEV 214
Query: 789 QEAIKKRALXHEV 827
Q I+K+ HE+
Sbjct: 215 QRRIQKKGDPHEM 227
>AB209440-1|BAD92677.1| 241|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 alpha subcomplex, 10, 42kDa precursor
variant protein.
Length = 241
Score = 131 bits (317), Expect = 3e-30
Identities = 76/187 (40%), Positives = 107/187 (57%), Gaps = 3/187 (1%)
Frame = +3
Query: 258 WLRSLIDRTTHRFDDNSKVIIVEGPVAAGKTAFAASLADDLGMKHFPEANMDLHY---IR 428
W L D+ + R + S+VI V+G + GK A +A+ LG KHFPEA +HY
Sbjct: 46 WHFLLGDKASKRLTERSRVITVDGNICTGKGKLAKEIAEKLGFKHFPEAG--IHYPDSTT 103
Query: 429 PNGVDLRSFDDQVPEDTRTFDHVNFNQNPNHRLAANFQIMMYVARYSQYIDALAHLFNTG 608
+G L + + + +D N ++RL Q +Y +R QY DAL HL TG
Sbjct: 104 GDGKPLATDYNGNCSLEKFYDDPRSNDGNSYRL----QSWLYSSRLLQYSDALEHLLTTG 159
Query: 609 QGIVLERSPYSDFVFLEAMYSXKFLSKAVRSTYYELRENTIEELMRPHLXIYLDLPVSKV 788
QG+VLERS +SDFVFLEAMY+ F+ K Y E++ TI + + PHL IY+D+PV +V
Sbjct: 160 QGVVLERSIFSDFVFLEAMYNQGFIRKQCVDHYNEVKSVTICDYLPPHLVIYIDVPVPEV 219
Query: 789 QEAIKKR 809
Q I+K+
Sbjct: 220 QRRIQKK 226
>BC031332-1|AAH31332.1| 201|Homo sapiens NDUFA10 protein protein.
Length = 201
Score = 101 bits (241), Expect = 4e-21
Identities = 61/151 (40%), Positives = 83/151 (54%), Gaps = 3/151 (1%)
Frame = +3
Query: 258 WLRSLIDRTTHRFDDNSKVIIVEGPVAAGKTAFAASLADDLGMKHFPEANMDLHY---IR 428
W L D+ + R + S+VI V+G + GK A +A+ LG KHFPEA +HY
Sbjct: 41 WHFLLGDKASKRLTERSRVITVDGNICTGKGKLAKEIAEKLGFKHFPEAG--IHYPDSTT 98
Query: 429 PNGVDLRSFDDQVPEDTRTFDHVNFNQNPNHRLAANFQIMMYVARYSQYIDALAHLFNTG 608
+G L + + + +D N ++RL Q +Y +R QY DAL HL TG
Sbjct: 99 GDGKPLATDYNGNCSLEKFYDDPRSNDGNSYRL----QSWLYSSRLLQYSDALEHLLTTG 154
Query: 609 QGIVLERSPYSDFVFLEAMYSXKFLSKAVRS 701
QG+VLERS +SDFVFLEAMY+ F+ K S
Sbjct: 155 QGVVLERSIFSDFVFLEAMYNQGFIRKQCES 185
>AF453834-1|AAL50984.1| 429|Homo sapiens NADH dehydrogenase
ubiquinone 1 alpha subcomplex protein.
Length = 429
Score = 101 bits (241), Expect = 4e-21
Identities = 61/151 (40%), Positives = 83/151 (54%), Gaps = 3/151 (1%)
Frame = +3
Query: 258 WLRSLIDRTTHRFDDNSKVIIVEGPVAAGKTAFAASLADDLGMKHFPEANMDLHY---IR 428
W L D+ + R + S+VI V+G + GK A +A+ LG KHFPEA +HY
Sbjct: 41 WHFLLGDKASKRLTERSRVITVDGNICTGKGKLAKEIAEKLGFKHFPEAG--IHYPDSTT 98
Query: 429 PNGVDLRSFDDQVPEDTRTFDHVNFNQNPNHRLAANFQIMMYVARYSQYIDALAHLFNTG 608
+G L + + + +D N ++RL Q +Y +R QY DAL HL TG
Sbjct: 99 GDGKPLATDYNGNCSLEKFYDDPRSNDGNSYRL----QSWLYSSRLLQYSDALEHLLTTG 154
Query: 609 QGIVLERSPYSDFVFLEAMYSXKFLSKAVRS 701
QG+VLERS +SDFVFLEAMY+ F+ K S
Sbjct: 155 QGVVLERSIFSDFVFLEAMYNQGFIRKQCES 185
Score = 31.5 bits (68), Expect = 3.9
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +3
Query: 705 YYELRENTIEELMRPHLXIYLDLPVSKVQE 794
Y E++ TI + + PHL IY+D+PV + E
Sbjct: 227 YNEVKSVTICDYLPPHLVIYIDVPVPEPHE 256
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,475,779
Number of Sequences: 237096
Number of extensions: 2421842
Number of successful extensions: 4432
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4216
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4415
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10426655866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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