Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_M24
         (416 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    22   2.8  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   6.4  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   6.4  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   6.4  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   6.4  

>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.8 bits (44), Expect = 2.8
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -3

Query: 330 LFTGIFLFWHXYLFLLVFGAG 268
           LF G+    +    LL+FG+G
Sbjct: 238 LFVGVIYTTYTIFLLLIFGSG 258


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = -1

Query: 383 SRINSASLCFLXCRDKPVFS 324
           S   S+ +CF     KP FS
Sbjct: 146 SLFRSSRMCFFKSSKKPAFS 165


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = -1

Query: 383 SRINSASLCFLXCRDKPVFS 324
           S   S+ +CF     KP FS
Sbjct: 146 SLFRSSRMCFFKSSKKPAFS 165


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = -1

Query: 383 SRINSASLCFLXCRDKPVFS 324
           S   S+ +CF     KP FS
Sbjct: 146 SLFRSSRMCFFKSSKKPAFS 165


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = -1

Query: 383 SRINSASLCFLXCRDKPVFS 324
           S   S+ +CF     KP FS
Sbjct: 146 SLFRSSRMCFFKSSKKPAFS 165


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,411
Number of Sequences: 336
Number of extensions: 1830
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9174063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)