Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_F_M24
(416 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC022326-1|AAH22326.2| 59|Homo sapiens small EDRK-rich factor ... 57 2e-08
BC015491-1|AAH15491.2| 59|Homo sapiens small EDRK-rich factor ... 57 2e-08
AF073298-1|AAC63516.1| 59|Homo sapiens small EDRK-rich factor ... 57 2e-08
BC021174-1|AAH21174.1| 62|Homo sapiens small EDRK-rich factor ... 49 5e-06
AF073518-1|AAC63517.1| 62|Homo sapiens small EDRK-rich factor ... 49 5e-06
BC104738-1|AAI04739.1| 110|Homo sapiens small EDRK-rich factor ... 33 0.38
BC103687-1|AAI03688.1| 110|Homo sapiens small EDRK-rich factor ... 33 0.38
BC101970-1|AAI01971.1| 110|Homo sapiens SERF1B protein protein. 33 0.38
BC093882-1|AAH93882.1| 110|Homo sapiens small EDRK-rich factor ... 33 0.38
BC093880-1|AAH93880.1| 110|Homo sapiens small EDRK-rich factor ... 33 0.38
BC035932-1|AAH35932.1| 110|Homo sapiens small EDRK-rich factor ... 33 0.38
AF073519-1|AAC63518.1| 110|Homo sapiens small EDRK-rich factor ... 33 0.38
BC101721-1|AAI01722.1| 864|Homo sapiens NMDA receptor regulated... 29 6.2
BC101719-1|AAI01720.1| 864|Homo sapiens NMDA receptor regulated... 29 6.2
BC028112-1|AAH28112.1| 335|Homo sapiens NARG1L protein protein. 29 6.2
AL731858-4|CAH73370.1| 864|Homo sapiens NMDA receptor regulated... 29 6.2
AL590665-1|CAH71511.1| 864|Homo sapiens NMDA receptor regulated... 29 6.2
AL354696-8|CAI16619.1| 864|Homo sapiens NMDA receptor regulated... 29 6.2
>BC022326-1|AAH22326.2| 59|Homo sapiens small EDRK-rich factor 2
protein.
Length = 59
Score = 57.2 bits (132), Expect = 2e-08
Identities = 29/56 (51%), Positives = 37/56 (66%)
Frame = +1
Query: 241 MTRGNQRDLARAKNQKKQVXMPKKKNASEKTGLSLQXRKHRDAELMREXQRKKEEE 408
MTRGNQR+LAR KN KKQ K K + GLS RK RD+E+M++ Q+K E+
Sbjct: 1 MTRGNQRELARQKNMKKQSDSVKGKRRDD--GLSAAARKQRDSEIMQQKQKKANEK 54
>BC015491-1|AAH15491.2| 59|Homo sapiens small EDRK-rich factor 2
protein.
Length = 59
Score = 57.2 bits (132), Expect = 2e-08
Identities = 29/56 (51%), Positives = 37/56 (66%)
Frame = +1
Query: 241 MTRGNQRDLARAKNQKKQVXMPKKKNASEKTGLSLQXRKHRDAELMREXQRKKEEE 408
MTRGNQR+LAR KN KKQ K K + GLS RK RD+E+M++ Q+K E+
Sbjct: 1 MTRGNQRELARQKNMKKQSDSVKGKRRDD--GLSAAARKQRDSEIMQQKQKKANEK 54
>AF073298-1|AAC63516.1| 59|Homo sapiens small EDRK-rich factor 2
protein.
Length = 59
Score = 57.2 bits (132), Expect = 2e-08
Identities = 29/56 (51%), Positives = 37/56 (66%)
Frame = +1
Query: 241 MTRGNQRDLARAKNQKKQVXMPKKKNASEKTGLSLQXRKHRDAELMREXQRKKEEE 408
MTRGNQR+LAR KN KKQ K K + GLS RK RD+E+M++ Q+K E+
Sbjct: 1 MTRGNQRELARQKNMKKQSDSVKGKRRDD--GLSAAARKQRDSEIMQQKQKKANEK 54
>BC021174-1|AAH21174.1| 62|Homo sapiens small EDRK-rich factor 1A
(telomeric) protein.
Length = 62
Score = 49.2 bits (112), Expect = 5e-06
Identities = 25/56 (44%), Positives = 35/56 (62%)
Frame = +1
Query: 241 MTRGNQRDLARAKNQKKQVXMPKKKNASEKTGLSLQXRKHRDAELMREXQRKKEEE 408
M RGNQR+LAR KN KK + K K ++ L+ RK RD+E+M+E Q+ E+
Sbjct: 1 MARGNQRELARQKNMKKTQEISKGKR--KEDSLTASQRKQRDSEIMQEKQKAANEK 54
>AF073518-1|AAC63517.1| 62|Homo sapiens small EDRK-rich factor 1,
short isoform protein.
Length = 62
Score = 49.2 bits (112), Expect = 5e-06
Identities = 25/56 (44%), Positives = 35/56 (62%)
Frame = +1
Query: 241 MTRGNQRDLARAKNQKKQVXMPKKKNASEKTGLSLQXRKHRDAELMREXQRKKEEE 408
M RGNQR+LAR KN KK + K K ++ L+ RK RD+E+M+E Q+ E+
Sbjct: 1 MARGNQRELARQKNMKKTQEISKGKR--KEDSLTASQRKQRDSEIMQEKQKAANEK 54
>BC104738-1|AAI04739.1| 110|Homo sapiens small EDRK-rich factor 1B
(centromeric) protein.
Length = 110
Score = 33.1 bits (72), Expect = 0.38
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = +1
Query: 241 MTRGNQRDLARAKNQKKQVXMPKKKNASE 327
M RGNQR+LAR KN KK + K K +
Sbjct: 1 MARGNQRELARQKNMKKTQEISKGKRKED 29
>BC103687-1|AAI03688.1| 110|Homo sapiens small EDRK-rich factor 1B
(centromeric) protein.
Length = 110
Score = 33.1 bits (72), Expect = 0.38
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = +1
Query: 241 MTRGNQRDLARAKNQKKQVXMPKKKNASE 327
M RGNQR+LAR KN KK + K K +
Sbjct: 1 MARGNQRELARQKNMKKTQEISKGKRKED 29
>BC101970-1|AAI01971.1| 110|Homo sapiens SERF1B protein protein.
Length = 110
Score = 33.1 bits (72), Expect = 0.38
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = +1
Query: 241 MTRGNQRDLARAKNQKKQVXMPKKKNASE 327
M RGNQR+LAR KN KK + K K +
Sbjct: 1 MARGNQRELARQKNMKKTQEISKGKRKED 29
>BC093882-1|AAH93882.1| 110|Homo sapiens small EDRK-rich factor 1A,
telomeric protein.
Length = 110
Score = 33.1 bits (72), Expect = 0.38
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = +1
Query: 241 MTRGNQRDLARAKNQKKQVXMPKKKNASE 327
M RGNQR+LAR KN KK + K K +
Sbjct: 1 MARGNQRELARQKNMKKTQEISKGKRKED 29
>BC093880-1|AAH93880.1| 110|Homo sapiens small EDRK-rich factor 1A
(telomeric) protein.
Length = 110
Score = 33.1 bits (72), Expect = 0.38
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = +1
Query: 241 MTRGNQRDLARAKNQKKQVXMPKKKNASE 327
M RGNQR+LAR KN KK + K K +
Sbjct: 1 MARGNQRELARQKNMKKTQEISKGKRKED 29
>BC035932-1|AAH35932.1| 110|Homo sapiens small EDRK-rich factor 1A
(telomeric) protein.
Length = 110
Score = 33.1 bits (72), Expect = 0.38
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = +1
Query: 241 MTRGNQRDLARAKNQKKQVXMPKKKNASE 327
M RGNQR+LAR KN KK + K K +
Sbjct: 1 MARGNQRELARQKNMKKTQEISKGKRKED 29
>AF073519-1|AAC63518.1| 110|Homo sapiens small EDRK-rich factor 1,
long isoform protein.
Length = 110
Score = 33.1 bits (72), Expect = 0.38
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = +1
Query: 241 MTRGNQRDLARAKNQKKQVXMPKKKNASE 327
M RGNQR+LAR KN KK + K K +
Sbjct: 1 MARGNQRELARQKNMKKTQEISKGKRKED 29
>BC101721-1|AAI01722.1| 864|Homo sapiens NMDA receptor regulated
1-like protein.
Length = 864
Score = 29.1 bits (62), Expect = 6.2
Identities = 18/52 (34%), Positives = 30/52 (57%)
Frame = +1
Query: 253 NQRDLARAKNQKKQVXMPKKKNASEKTGLSLQXRKHRDAELMREXQRKKEEE 408
N +L+ AK KK + K++ A +K L + RKH + E ++ Q+KK +E
Sbjct: 583 NSENLS-AKELKKMLS--KQRRAQKKAKLE-EERKHAERERQQKNQKKKRDE 630
>BC101719-1|AAI01720.1| 864|Homo sapiens NMDA receptor regulated
1-like protein.
Length = 864
Score = 29.1 bits (62), Expect = 6.2
Identities = 18/52 (34%), Positives = 30/52 (57%)
Frame = +1
Query: 253 NQRDLARAKNQKKQVXMPKKKNASEKTGLSLQXRKHRDAELMREXQRKKEEE 408
N +L+ AK KK + K++ A +K L + RKH + E ++ Q+KK +E
Sbjct: 583 NSENLS-AKELKKMLS--KQRRAQKKAKLE-EERKHAERERQQKNQKKKRDE 630
>BC028112-1|AAH28112.1| 335|Homo sapiens NARG1L protein protein.
Length = 335
Score = 29.1 bits (62), Expect = 6.2
Identities = 18/52 (34%), Positives = 30/52 (57%)
Frame = +1
Query: 253 NQRDLARAKNQKKQVXMPKKKNASEKTGLSLQXRKHRDAELMREXQRKKEEE 408
N +L+ AK KK + K++ A +K L + RKH + E ++ Q+KK +E
Sbjct: 54 NSENLS-AKELKKMLS--KQRRAQKKAKLE-EERKHAERERQQKNQKKKRDE 101
>AL731858-4|CAH73370.1| 864|Homo sapiens NMDA receptor regulated
1-like protein.
Length = 864
Score = 29.1 bits (62), Expect = 6.2
Identities = 18/52 (34%), Positives = 30/52 (57%)
Frame = +1
Query: 253 NQRDLARAKNQKKQVXMPKKKNASEKTGLSLQXRKHRDAELMREXQRKKEEE 408
N +L+ AK KK + K++ A +K L + RKH + E ++ Q+KK +E
Sbjct: 583 NSENLS-AKELKKMLS--KQRRAQKKAKLE-EERKHAERERQQKNQKKKRDE 630
>AL590665-1|CAH71511.1| 864|Homo sapiens NMDA receptor regulated
1-like protein.
Length = 864
Score = 29.1 bits (62), Expect = 6.2
Identities = 18/52 (34%), Positives = 30/52 (57%)
Frame = +1
Query: 253 NQRDLARAKNQKKQVXMPKKKNASEKTGLSLQXRKHRDAELMREXQRKKEEE 408
N +L+ AK KK + K++ A +K L + RKH + E ++ Q+KK +E
Sbjct: 583 NSENLS-AKELKKMLS--KQRRAQKKAKLE-EERKHAERERQQKNQKKKRDE 630
>AL354696-8|CAI16619.1| 864|Homo sapiens NMDA receptor regulated
1-like protein.
Length = 864
Score = 29.1 bits (62), Expect = 6.2
Identities = 18/52 (34%), Positives = 30/52 (57%)
Frame = +1
Query: 253 NQRDLARAKNQKKQVXMPKKKNASEKTGLSLQXRKHRDAELMREXQRKKEEE 408
N +L+ AK KK + K++ A +K L + RKH + E ++ Q+KK +E
Sbjct: 583 NSENLS-AKELKKMLS--KQRRAQKKAKLE-EERKHAERERQQKNQKKKRDE 630
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,821,268
Number of Sequences: 237096
Number of extensions: 979254
Number of successful extensions: 2557
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 2350
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2488
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3144905170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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