Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_M22
         (861 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83237-6|CAE17879.1|  549|Caenorhabditis elegans Hypothetical pr...   107   1e-23
U40946-2|AAO91682.1|  780|Caenorhabditis elegans Hypothetical pr...    30   2.4  
Z72514-5|CAA96679.5|  818|Caenorhabditis elegans Hypothetical pr...    29   3.2  
Z82269-3|CAB05207.2| 1319|Caenorhabditis elegans Hypothetical pr...    29   4.3  
Z82269-2|CAJ76945.1| 1129|Caenorhabditis elegans Hypothetical pr...    29   4.3  
AF003142-1|AAB54189.2|  389|Caenorhabditis elegans Hypothetical ...    29   4.3  
AF125956-5|AAD14722.2|  353|Caenorhabditis elegans Serpentine re...    28   7.4  
U58726-4|AAB00578.1|  408|Caenorhabditis elegans Hypothetical pr...    28   9.8  

>Z83237-6|CAE17879.1|  549|Caenorhabditis elegans Hypothetical
           protein R06B9.6 protein.
          Length = 549

 Score =  107 bits (256), Expect = 1e-23
 Identities = 73/242 (30%), Positives = 108/242 (44%), Gaps = 11/242 (4%)
 Frame = +1

Query: 169 GTIIENLSGRKXXXXXXXXXXXXXXXXXIGGLVAPMPANAQMMIAXXXXXXXXXXXXXXX 348
           G +IENLS RK                 IG   AP P++   M                 
Sbjct: 4   GAVIENLSNRKLFVIFAGLLVIQIMFFLIGAWYAPSPSS--YMEFEMITCRDETKGLSGE 61

Query: 349 WFYNRGKGACQNIG--LENLHHDLSETDFVFAFQMPLPRENMILDYSRWQQNLIGVLQID 522
           W +   +  CQ I    E         + VF  +MP  R+ + L+YS W Q L+GVL +D
Sbjct: 62  WIH---RDNCQQISELSEYTPSSFDLREIVFIAKMPHTRDGIELEYSPWFQFLLGVLHVD 118

Query: 523 IKYHSLMEIQPRSVITIDARMAYRNKGDPEEQWRLYTRSVEKRNLDCDI--XIKSEHHLY 696
           ++Y    +    + + ++ RM YR+K   + +W+    S   R L+C I    K     Y
Sbjct: 119 VEYSEHFKYVAHAPLELEVRMGYRDKESKKNEWKELVTSNVTRILECTIAEDEKKAGGTY 178

Query: 697 NCSAMPLFELGSLFHDYYLLNIRLPV-------ETPDMNSHIGHIHDMSLIVINQNGGFX 855
           +C  + LFELGS  + +YL+NIR+P+       +    N  IG +  + LI I+QNGGF 
Sbjct: 179 DCDMLDLFELGSSSYPFYLINIRIPINQQACQFDNKSANCQIGKLTGLRLIEIHQNGGFT 238

Query: 856 KV 861
            V
Sbjct: 239 LV 240


>U40946-2|AAO91682.1|  780|Caenorhabditis elegans Hypothetical
           protein W05H9.4 protein.
          Length = 780

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 15/45 (33%), Positives = 22/45 (48%)
 Frame = +1

Query: 631 TRSVEKRNLDCDIXIKSEHHLYNCSAMPLFELGSLFHDYYLLNIR 765
           T S+EK +L CD+  K  ++LY       +    L H   LL+ R
Sbjct: 135 TMSIEKTHLPCDLVNKFSNYLYTIEQCKRYGHADLTHFAQLLDFR 179


>Z72514-5|CAA96679.5|  818|Caenorhabditis elegans Hypothetical
           protein T10B10.7 protein.
          Length = 818

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = -3

Query: 685 VHFLFXCHSLNYVSQQTECIASIVLRGLLCFCM 587
           +HFLF C SL +V      +  I++R +L F +
Sbjct: 582 LHFLFYCRSLKFVGPFVLMVYKIIVRDMLRFLL 614


>Z82269-3|CAB05207.2| 1319|Caenorhabditis elegans Hypothetical protein
            F52G2.2a protein.
          Length = 1319

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 12/22 (54%), Positives = 17/22 (77%)
 Frame = -1

Query: 858  FGEATILINNNQGHVMDVSNVR 793
            FGEA +L +N+ GHV+  SNV+
Sbjct: 1022 FGEALVLRSNDVGHVVMASNVK 1043


>Z82269-2|CAJ76945.1| 1129|Caenorhabditis elegans Hypothetical
           protein F52G2.2b protein.
          Length = 1129

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 12/22 (54%), Positives = 17/22 (77%)
 Frame = -1

Query: 858 FGEATILINNNQGHVMDVSNVR 793
           FGEA +L +N+ GHV+  SNV+
Sbjct: 832 FGEALVLRSNDVGHVVMASNVK 853


>AF003142-1|AAB54189.2|  389|Caenorhabditis elegans Hypothetical
           protein F57C9.6 protein.
          Length = 389

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
 Frame = -3

Query: 679 FLFXCHSLNYVSQQTEC--IASIVLRGLLCFCM 587
           F+F CH L Y S  T C  + +IVL  LL F +
Sbjct: 148 FIFICHPLRYSSIVTRCRVLWAIVLSWLLAFVL 180


>AF125956-5|AAD14722.2|  353|Caenorhabditis elegans Serpentine
           receptor, class h protein80 protein.
          Length = 353

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = +1

Query: 607 PEEQWRLYTRSVEKRNLDCDIXIKSEHHLYNCSAMPLFEL 726
           PE+Q  LY++ +EK     D   K+E H   C     F+L
Sbjct: 172 PEDQETLYSKVLEKVPCPADDYFKAEEHFVLCDNEAHFKL 211


>U58726-4|AAB00578.1|  408|Caenorhabditis elegans Hypothetical
           protein T01C8.5 protein.
          Length = 408

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
 Frame = +1

Query: 469 ILDYSRWQQNLIGVLQIDIKYHSLMEIQPRSVITIDARMAYRNKG-DP-EEQWRLYTRSV 642
           + DY+ W  +   V  I+ K+ S +E  P   + I    A+   G DP +EQW+L    +
Sbjct: 148 VADYTFWDYDNKRV-HIE-KFLSDLESAPEKSVIILHGCAHNPTGMDPTQEQWKLVAEVI 205

Query: 643 EKRNL 657
           +++NL
Sbjct: 206 KRKNL 210


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,994,238
Number of Sequences: 27780
Number of extensions: 418139
Number of successful extensions: 1076
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1025
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1073
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2150453690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)