Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_M18
         (787 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7H381 Cluster: Putative uncharacterized protein; n=1; ...    33   6.1  
UniRef50_UPI0000DB767E Cluster: PREDICTED: similar to CG8306-PA,...    33   8.1  

>UniRef50_A7H381 Cluster: Putative uncharacterized protein; n=1;
           Campylobacter jejuni subsp. doylei 269.97|Rep: Putative
           uncharacterized protein - Campylobacter jejuni subsp.
           doylei 269.97
          Length = 800

 Score = 33.5 bits (73), Expect = 6.1
 Identities = 14/49 (28%), Positives = 27/49 (55%)
 Frame = -1

Query: 727 EESTKTFKIIIYNFYLQLIYERFDSQKKNIFINIFCRVVTGNLLSAPKY 581
           E+++K F+ +++ F  +   + F   KK++FI + C V+ GN      Y
Sbjct: 466 EDNSKEFQELVHTFTFKNTEKEFYKNKKDLFILVECGVMNGNRTDTMNY 514


>UniRef50_UPI0000DB767E Cluster: PREDICTED: similar to CG8306-PA,
           partial; n=1; Apis mellifera|Rep: PREDICTED: similar to
           CG8306-PA, partial - Apis mellifera
          Length = 222

 Score = 33.1 bits (72), Expect = 8.1
 Identities = 16/29 (55%), Positives = 20/29 (68%)
 Frame = +2

Query: 584 FWST*QISCHNSAENIDKNVFFL*IKPLI 670
           F++T  I  HNS  + DKN+F L IKPLI
Sbjct: 116 FYNTRTIELHNSLSDHDKNLFNLDIKPLI 144


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 636,389,570
Number of Sequences: 1657284
Number of extensions: 11919304
Number of successful extensions: 24770
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 23679
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24748
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 66673674990
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)