Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_M18
         (787 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0217 + 1848970-1849251,1849419-1849566,1849638-1849789,185...    29   3.2  
07_03_0293 + 16321539-16321893,16322020-16322207,16322881-163229...    29   5.5  
06_01_0390 + 2802334-2802339,2802461-2802618,2802755-2802826,280...    28   7.3  

>01_01_0217 +
           1848970-1849251,1849419-1849566,1849638-1849789,
           1850146-1850328,1850690-1850765,1850956-1851033,
           1851584-1851669,1852680-1852753,1852920-1852965,
           1853211-1853320,1853600-1853774,1854501-1854749
          Length = 552

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 6/60 (10%)
 Frame = -2

Query: 228 KLHVDHFSKNKAIKKFHFLRVYTSTRTHFLNKKITV*YNLQ-YSIYIFE-----NLFXWW 67
           +LHVDH +    + K  + +V  S  ++ +++ I + Y +Q +S+  FE     N   WW
Sbjct: 456 RLHVDHLNSQNKLPKICYTKVTLSIASYDISQIIGLIYCMQSFSMDKFEVSCGTNFMLWW 515


>07_03_0293 +
           16321539-16321893,16322020-16322207,16322881-16322904,
           16323497-16323550,16323854-16323944,16324715-16324815,
           16324949-16324999,16326626-16326754,16327772-16327834,
           16327928-16328171,16329628-16329776,16329855-16329944,
           16330343-16330477,16330579-16330635,16331079-16331135,
           16332299-16332336,16332532-16332601,16332971-16333207
          Length = 710

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 16/52 (30%), Positives = 31/52 (59%)
 Frame = -3

Query: 479 RLVLKIYLIHTLKTKVFEIIKLQNIRFFEVKLLYRRWKKIYRHIFRLRVTFF 324
           RL+ KI +++TL+  +F I+ + N+     K++ R   +I+R I   ++ FF
Sbjct: 135 RLLSKIAVLYTLEP-IFTIVFVINMTVIWEKVMARLRSQIFRRILIQKMVFF 185


>06_01_0390 +
           2802334-2802339,2802461-2802618,2802755-2802826,
           2802967-2803114,2803234-2803503,2803741-2803904,
           2804184-2804236,2804302-2804496,2804597-2804694,
           2804787-2804891
          Length = 422

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +3

Query: 171 VRSETSLWPYFSKNDLH 221
           V   T+LWPYF+ N++H
Sbjct: 372 VNFHTALWPYFAHNNIH 388


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,579,534
Number of Sequences: 37544
Number of extensions: 268016
Number of successful extensions: 466
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 445
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 459
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2115411120
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)