Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_M18
         (787 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L23146-1|AAA03750.1| 1011|Drosophila melanogaster neuromusculin ...    29   9.5  
AE014296-3753|ABI31268.1| 1036|Drosophila melanogaster CG8779-PB...    29   9.5  
AE014296-3752|AAF51887.4| 1087|Drosophila melanogaster CG8779-PA...    29   9.5  

>L23146-1|AAA03750.1| 1011|Drosophila melanogaster neuromusculin
            protein.
          Length = 1011

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
 Frame = -2

Query: 204  KNKAIKKFHFLRV-YTSTRTHFLNKKITV*YNLQYSIYIFENLFXWWWWQENKL 46
            +N   K F+ L+  Y  +RT+      TV Y     I + E L  W  W++N L
Sbjct: 918  ENSVEKSFYILQTDYAISRTYRCVANNTVGYGPFCEIEVAEQLAWWQLWEKNTL 971


>AE014296-3753|ABI31268.1| 1036|Drosophila melanogaster CG8779-PB,
            isoform B protein.
          Length = 1036

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
 Frame = -2

Query: 204  KNKAIKKFHFLRV-YTSTRTHFLNKKITV*YNLQYSIYIFENLFXWWWWQENKL 46
            +N   K F+ L+  Y  +RT+      TV Y     I + E L  W  W++N L
Sbjct: 921  ENSVEKSFYILQTDYAISRTYRCVANNTVGYGPFCEIEVAEQLAWWQLWEKNTL 974


>AE014296-3752|AAF51887.4| 1087|Drosophila melanogaster CG8779-PA,
            isoform A protein.
          Length = 1087

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
 Frame = -2

Query: 204  KNKAIKKFHFLRV-YTSTRTHFLNKKITV*YNLQYSIYIFENLFXWWWWQENKL 46
            +N   K F+ L+  Y  +RT+      TV Y     I + E L  W  W++N L
Sbjct: 921  ENSVEKSFYILQTDYAISRTYRCVANNTVGYGPFCEIEVAEQLAWWQLWEKNTL 974


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,042,875
Number of Sequences: 53049
Number of extensions: 510335
Number of successful extensions: 773
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 760
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 773
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3634208604
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)