Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_M18
         (787 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70035-11|CAA93872.1|  388|Caenorhabditis elegans Hypothetical p...    29   5.0  
Z92781-2|CAB07181.2|  397|Caenorhabditis elegans Hypothetical pr...    28   8.7  

>Z70035-11|CAA93872.1|  388|Caenorhabditis elegans Hypothetical
           protein R09D1.13 protein.
          Length = 388

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 17/62 (27%), Positives = 30/62 (48%)
 Frame = -1

Query: 748 TYSIKCFEESTKTFKIIIYNFYLQLIYERFDSQKKNIFINIFCRVVTGNLLSAPKYLE*P 569
           +Y+   F E T  +   +  + L  + E      K +F ++   +  GN LS PKY++ P
Sbjct: 274 SYNELIFNEKTDVWSFGVCLYELYSLGEDPYENVKTLFDHLMEYLEKGNRLSKPKYIDSP 333

Query: 568 KI 563
           +I
Sbjct: 334 EI 335


>Z92781-2|CAB07181.2|  397|Caenorhabditis elegans Hypothetical
           protein F09C3.3 protein.
          Length = 397

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 17/52 (32%), Positives = 22/52 (42%)
 Frame = +3

Query: 309 RWRVTEKCDA*PKNVTVNFFPTPIKKFHFKKTYIL*FNNFKHFSFQSVN*IY 464
           RWRV EK    PK          +   H  K ++L F N      QS+N I+
Sbjct: 113 RWRVAEKYRKMPKITLRKLIEHLLVLLHLPKIHVLSFKNMS--DLQSINEIF 162


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,620,806
Number of Sequences: 27780
Number of extensions: 312348
Number of successful extensions: 632
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 627
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 632
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1903721438
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)