Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_F_M16
(772 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q16740 Cluster: Putative ATP-dependent Clp protease pro... 285 6e-76
UniRef50_Q9VKY3 Cluster: ATP-dependent Clp protease proteolytic ... 274 2e-72
UniRef50_Q01HQ5 Cluster: ATP-dependent Clp protease proteolytic ... 246 5e-64
UniRef50_Q1RJH2 Cluster: ATP-dependent Clp protease proteolytic ... 237 2e-61
UniRef50_Q8YHC8 Cluster: ATP-dependent Clp protease proteolytic ... 225 9e-58
UniRef50_Q6G3Z3 Cluster: ATP-dependent Clp protease proteolytic ... 225 1e-57
UniRef50_O67357 Cluster: ATP-dependent Clp protease proteolytic ... 225 1e-57
UniRef50_Q8XYP7 Cluster: ATP-dependent Clp protease proteolytic ... 223 4e-57
UniRef50_Q8RC25 Cluster: ATP-dependent Clp protease proteolytic ... 216 6e-55
UniRef50_Q1IRD8 Cluster: ATP-dependent Clp protease proteolytic ... 210 2e-53
UniRef50_Q8YQX8 Cluster: ATP-dependent Clp protease proteolytic ... 210 4e-53
UniRef50_Q59993 Cluster: ATP-dependent Clp protease proteolytic ... 206 6e-52
UniRef50_Q2UPZ9 Cluster: ATP-dependent Clp protease proteolytic ... 185 1e-45
UniRef50_A4R250 Cluster: ATP-dependent Clp protease proteolytic ... 185 1e-45
UniRef50_Q8DST7 Cluster: ATP-dependent Clp protease proteolytic ... 171 1e-41
UniRef50_Q7MX09 Cluster: ATP-dependent Clp protease proteolytic ... 165 1e-39
UniRef50_Q82NZ3 Cluster: ATP-dependent Clp protease proteolytic ... 163 3e-39
UniRef50_UPI0000DB7F4F Cluster: PREDICTED: similar to Putative A... 163 4e-39
UniRef50_Q7UK67 Cluster: ATP-dependent Clp protease proteolytic ... 163 6e-39
UniRef50_Q9ZH58 Cluster: ATP-dependent Clp protease proteolytic ... 162 1e-38
UniRef50_Q70AH6 Cluster: ATP-dependent Clp protease proteolytic ... 158 1e-37
UniRef50_Q7NEW1 Cluster: ATP-dependent Clp protease proteolytic ... 157 2e-37
UniRef50_Q9FCC9 Cluster: Putative ATP-dependent Clp protease pro... 154 2e-36
UniRef50_P56317 Cluster: ATP-dependent Clp protease proteolytic ... 154 3e-36
UniRef50_A4RXD2 Cluster: ATP-dependent Clp protease proteolytic ... 151 2e-35
UniRef50_UPI0000D9E9DE Cluster: PREDICTED: ClpP caseinolytic pep... 149 8e-35
UniRef50_Q2J9A8 Cluster: ATP-dependent Clp protease proteolytic ... 148 1e-34
UniRef50_Q9MUV8 Cluster: ATP-dependent Clp protease proteolytic ... 146 5e-34
UniRef50_A7ATV1 Cluster: ATP-dependent Clp protease proteolytic ... 144 3e-33
UniRef50_A1SKA5 Cluster: ATP-dependent Clp protease proteolytic ... 141 2e-32
UniRef50_A7PR54 Cluster: Chromosome chr14 scaffold_26, whole gen... 140 3e-32
UniRef50_O82421 Cluster: ATP-dependent Clp protease proteolytic ... 139 6e-32
UniRef50_A7AQC7 Cluster: ATP-dependent Clp protease proteolytic ... 136 4e-31
UniRef50_P56772 Cluster: ATP-dependent Clp protease proteolytic ... 134 2e-30
UniRef50_Q98RW7 Cluster: ATP-dependent Clp protease proteolytic ... 134 3e-30
UniRef50_A2XFV5 Cluster: ATP-dependent Clp protease proteolytic ... 133 5e-30
UniRef50_Q72R01 Cluster: ATP-dependent Clp protease proteolytic ... 131 2e-29
UniRef50_A7CRR7 Cluster: Endopeptidase Clp; n=1; Opitutaceae bac... 129 9e-29
UniRef50_Q93ZD4 Cluster: ATP-dependent Clp protease proteolytic ... 127 3e-28
UniRef50_Q8LB10 Cluster: ATP-dependent Clp protease proteolytic ... 127 3e-28
UniRef50_Q36863 Cluster: ATP-dependent Clp protease proteolytic ... 126 5e-28
UniRef50_A0LYF8 Cluster: ATP-dependent Clp protease proteolytic ... 126 6e-28
UniRef50_Q9FHJ7 Cluster: ATP-dependent Clp protease proteolytic ... 125 1e-27
UniRef50_O48891 Cluster: ATP-dependent Clp protease proteolytic ... 125 1e-27
UniRef50_Q4UIN3 Cluster: ATP-dependent Clp protease proteolytic ... 124 3e-27
UniRef50_Q5FQT4 Cluster: ATP-dependent Clp protease proteolytic ... 122 1e-26
UniRef50_A4RST7 Cluster: ATP-dependent Clp protease proteolytic ... 122 1e-26
UniRef50_O84003 Cluster: ATP-dependent Clp protease proteolytic ... 122 1e-26
UniRef50_Q300E3 Cluster: ATP-dependent Clp protease proteolytic ... 121 2e-26
UniRef50_Q00TD8 Cluster: Putative ATP-dependent Clp protease pro... 121 2e-26
UniRef50_Q9PJW1 Cluster: ATP-dependent Clp protease proteolytic ... 120 3e-26
UniRef50_P48254 Cluster: Putative ATP-dependent Clp protease pro... 120 4e-26
UniRef50_A6DMN5 Cluster: ATP-dependent Clp protease proteolytic ... 119 9e-26
UniRef50_Q1PYX1 Cluster: ATP-dependent Clp protease proteolytic ... 118 1e-25
UniRef50_Q5Z0M5 Cluster: ATP-dependent Clp protease proteolytic ... 118 2e-25
UniRef50_Q3LWG6 Cluster: ATP-dependent Clp protease proteolytic ... 116 7e-25
UniRef50_A5KB90 Cluster: ATP-dependent Clp protease proteolytic ... 113 6e-24
UniRef50_Q3LW65 Cluster: ATP-dependent Clp protease proteolytic ... 110 4e-23
UniRef50_O97252 Cluster: ATP-dependent Clp protease proteolytic ... 110 4e-23
UniRef50_O51698 Cluster: ATP-dependent Clp protease proteolytic ... 110 4e-23
UniRef50_Q8Y7Y1 Cluster: ATP-dependent Clp protease proteolytic ... 109 7e-23
UniRef50_P26567 Cluster: ATP-dependent Clp protease proteolytic ... 109 7e-23
UniRef50_Q4UAC9 Cluster: ATP-dependent Clp protease proteolytic ... 108 1e-22
UniRef50_Q50DZ1 Cluster: ATP-dependent Clp protease proteolytic ... 107 3e-22
UniRef50_Q06R14 Cluster: ATP-dependent Clp protease proteolytic ... 105 1e-21
UniRef50_Q2SJI3 Cluster: ATP-dependent Clp protease, proteolytic... 104 2e-21
UniRef50_Q9MTJ8 Cluster: ATP-dependent Clp protease proteolytic ... 104 3e-21
UniRef50_P54414 Cluster: ATP-dependent Clp protease proteolytic ... 103 6e-21
UniRef50_Q2WGG1 Cluster: ATP-dependent Clp protease proteolytic ... 99 1e-19
UniRef50_A5K0N3 Cluster: ATP-dependent Clp protease proteolytic ... 99 1e-19
UniRef50_Q06SH9 Cluster: Proteolytic subunit 2 of clp protease; ... 97 4e-19
UniRef50_Q06FP3 Cluster: ATP-dependent Clp protease proteolytic ... 97 6e-19
UniRef50_UPI000050FD0C Cluster: COG0740: Protease subunit of ATP... 95 2e-18
UniRef50_A4S2U0 Cluster: ATP-dependent Clp protease proteolytic ... 93 5e-18
UniRef50_Q67XY5 Cluster: ATP-dependent Clp protease proteolytic ... 92 1e-17
UniRef50_A5BHP1 Cluster: ATP-dependent Clp protease proteolytic ... 89 9e-17
UniRef50_P42380 Cluster: ATP-dependent Clp protease proteolytic ... 89 9e-17
UniRef50_A4RSQ9 Cluster: ATP-dependent Clp protease proteolytic ... 89 1e-16
UniRef50_A4E7Q8 Cluster: ATP-dependent Clp protease proteolytic ... 84 3e-15
UniRef50_Q5IX12 Cluster: ATP-dependent Clp protease proteolytic ... 79 2e-13
UniRef50_A4S2Q5 Cluster: ATP-dependent Clp protease proteolytic ... 79 2e-13
UniRef50_Q6C1Y5 Cluster: ATP-dependent Clp protease proteolytic ... 77 6e-13
UniRef50_Q4UBQ0 Cluster: ATP-dependent Clp protease proteolytic ... 75 1e-12
UniRef50_Q9XJ35 Cluster: ATP-dependent Clp protease proteolytic ... 73 8e-12
UniRef50_A7QL58 Cluster: Chromosome chr3 scaffold_117, whole gen... 72 2e-11
UniRef50_Q8ZQG9 Cluster: ATP-dependent Clp protease proteolytic ... 64 4e-09
UniRef50_Q9PFZ5 Cluster: ATP-dependent Clp protease proteolytic ... 60 5e-08
UniRef50_P42379 Cluster: ATP-dependent Clp protease proteolytic ... 60 5e-08
UniRef50_Q4JLM3 Cluster: ATP-dependent Clp protease proteolytic ... 60 6e-08
UniRef50_A1K6N2 Cluster: ATP-dependent Clp protease proteolytic ... 60 6e-08
UniRef50_Q3EL78 Cluster: ATP-dependent Clp protease proteolytic ... 60 8e-08
UniRef50_A1WEU3 Cluster: ATP-dependent Clp protease proteolytic ... 59 1e-07
UniRef50_A3X5R0 Cluster: ATP-dependent Clp protease proteolytic ... 58 2e-07
UniRef50_Q40943 Cluster: ATP-dependent clp protease proteolytic ... 58 2e-07
UniRef50_Q7P8G2 Cluster: ATP-dependent Clp protease proteolytic ... 57 4e-07
UniRef50_A0VK63 Cluster: ATP-dependent Clp protease proteolytic ... 57 6e-07
UniRef50_A1FMT8 Cluster: ATP-dependent Clp protease proteolytic ... 56 7e-07
UniRef50_Q9T1F7 Cluster: Putative uncharacterized protein; n=1; ... 56 7e-07
UniRef50_Q4A301 Cluster: Putative ATP-dependent protease proteol... 54 3e-06
UniRef50_Q1UAH7 Cluster: ATP-dependent Clp protease proteolytic ... 54 3e-06
UniRef50_A5KJS2 Cluster: ATP-dependent Clp protease proteolytic ... 54 3e-06
UniRef50_A0IWL1 Cluster: ATP-dependent Clp protease proteolytic ... 54 3e-06
UniRef50_O04018 Cluster: ATP-dependent Clp protease proteolytic ... 54 3e-06
UniRef50_A7FWE0 Cluster: Putative Clp protease; n=1; Clostridium... 54 4e-06
UniRef50_Q0SPK3 Cluster: Clp protease domain protein; n=2; root|... 54 4e-06
UniRef50_Q892G9 Cluster: ATP-dependent Clp protease proteolytic ... 54 5e-06
UniRef50_Q65KG4 Cluster: Putative uncharacterized protein; n=1; ... 54 5e-06
UniRef50_Q65ES6 Cluster: ATP-dependent Clp protease proteolytic ... 54 5e-06
UniRef50_Q3LW56 Cluster: ATP-dependent Clp protease proteolytic ... 54 5e-06
UniRef50_A3DG62 Cluster: ATP-dependent Clp protease proteolytic ... 52 2e-05
UniRef50_Q97HW4 Cluster: ATP-dependent Clp protease proteolytic ... 52 2e-05
UniRef50_Q6SZ10 Cluster: ATP-dependent Clp protease proteolytic ... 51 3e-05
UniRef50_Q3Z3P3 Cluster: ATP-dependent Clp protease proteolytic ... 51 4e-05
UniRef50_A3JIS6 Cluster: ATP-dependent Clp protease proteolytic ... 51 4e-05
UniRef50_A1VPI3 Cluster: Peptidase S14, ClpP precursor; n=1; Pol... 51 4e-05
UniRef50_Q5KRF8 Cluster: ATP-dependent Clp protease proteolytic ... 50 5e-05
UniRef50_A5NH97 Cluster: Peptidase S14, ClpP precursor; n=19; ro... 50 5e-05
UniRef50_A6N1Z7 Cluster: Clp protease; n=1; Microbacterium phage... 50 6e-05
UniRef50_A5V8D3 Cluster: ATP-dependent Clp protease proteolytic ... 50 8e-05
UniRef50_A3F644 Cluster: Head maturation protease; n=3; root|Rep... 50 8e-05
UniRef50_Q3LVU8 Cluster: Clp protease; n=1; Bigelowiella natans|... 49 1e-04
UniRef50_A2Y843 Cluster: ATP-dependent Clp protease proteolytic ... 49 1e-04
UniRef50_Q7WLQ1 Cluster: ATP-dependent Clp protease proteolytic ... 48 2e-04
UniRef50_A4J7R2 Cluster: ATP-dependent Clp protease proteolytic ... 48 3e-04
UniRef50_Q4ZD75 Cluster: ORF013; n=2; root|Rep: ORF013 - Staphyl... 47 5e-04
UniRef50_Q3DME6 Cluster: ATP-dependent Clp protease proteolytic ... 47 6e-04
UniRef50_A5ZRV6 Cluster: ATP-dependent Clp protease proteolytic ... 47 6e-04
UniRef50_Q0S7S6 Cluster: ATP-dependent Clp protease proteolytic ... 46 8e-04
UniRef50_A7GI71 Cluster: Putative Clp protease; n=1; Clostridium... 46 0.001
UniRef50_A5EQQ6 Cluster: Putative Peptidase S14, ClpP; n=1; Brad... 46 0.001
UniRef50_A3EHW0 Cluster: ATP-dependent Clp protease proteolytic ... 46 0.001
UniRef50_A5TX35 Cluster: Endopeptidase Clp; n=1; Fusobacterium n... 45 0.002
UniRef50_Q01F40 Cluster: Clp protease 2 proteolytic subunit; n=1... 45 0.002
UniRef50_A7R7H5 Cluster: Chromosome undetermined scaffold_1785, ... 45 0.002
UniRef50_Q6R878 Cluster: 77ORF015; n=10; root|Rep: 77ORF015 - St... 45 0.002
UniRef50_Q1A0W9 Cluster: Gp102; n=2; unclassified Siphoviridae|R... 45 0.002
UniRef50_Q6WIE4 Cluster: ClpP; n=1; Vibrio phage KVP40|Rep: ClpP... 45 0.002
UniRef50_A7CYV1 Cluster: Peptidase S14 ClpP precursor; n=1; Opit... 44 0.003
UniRef50_Q7NYX7 Cluster: Putative uncharacterized protein; n=2; ... 44 0.004
UniRef50_A7BZX9 Cluster: Secreted protein; n=2; Beggiatoa sp. PS... 43 0.007
UniRef50_A1ZY45 Cluster: ATP-dependent Clp protease proteolytic ... 43 0.007
UniRef50_A5ZPL9 Cluster: Putative uncharacterized protein; n=1; ... 43 0.010
UniRef50_A7DYB1 Cluster: Putative uncharacterized protein; n=1; ... 42 0.017
UniRef50_Q982R9 Cluster: ATP-dependent Clp protease proteolytic ... 42 0.022
UniRef50_A5C4G8 Cluster: Putative uncharacterized protein; n=1; ... 42 0.022
UniRef50_Q4ZCT9 Cluster: ORF015; n=14; root|Rep: ORF015 - Staphy... 41 0.030
UniRef50_Q8ZSM4 Cluster: Protease IV, conjectural; n=2; Pyrobacu... 41 0.030
UniRef50_A5Z441 Cluster: Putative uncharacterized protein; n=1; ... 40 0.052
UniRef50_Q2AR30 Cluster: ATP-dependent Clp protease proteolytic ... 40 0.091
UniRef50_Q2K642 Cluster: Probable Clp protease protein; n=1; Rhi... 39 0.12
UniRef50_Q6LHS2 Cluster: ATP-dependent Clp protease proteolytic ... 39 0.16
UniRef50_Q2NPI5 Cluster: ClpP family protein; n=3; root|Rep: Clp... 39 0.16
UniRef50_Q75QN7 Cluster: ATP-dependent Clp protease proteolytic ... 38 0.21
UniRef50_Q03FG4 Cluster: Protease subunit of ATP-dependent Clp p... 38 0.37
UniRef50_A2VQ14 Cluster: ATP-dependent Clp protease proteolytic ... 38 0.37
UniRef50_Q85X42 Cluster: ORF60d; n=1; Pinus koraiensis|Rep: ORF6... 37 0.64
UniRef50_Q9ADL6 Cluster: Soraphen polyketide synthase A; n=9; Ba... 36 1.1
UniRef50_Q11IP3 Cluster: Peptidase S14, ClpP precursor; n=1; Mes... 36 1.1
UniRef50_Q53840 Cluster: Soraphen polyketide synthase B; n=2; ce... 36 1.5
UniRef50_A7E5X1 Cluster: Putative uncharacterized protein; n=1; ... 36 1.5
UniRef50_A7GEE6 Cluster: Putative Clp protease; n=1; Clostridium... 35 1.9
UniRef50_Q9NDT9 Cluster: BCS-5; n=1; Balanus amphitrite|Rep: BCS... 35 1.9
UniRef50_Q1IJ44 Cluster: Signal peptide peptidase SppA, 36K type... 35 2.6
UniRef50_Q0BEJ3 Cluster: ATP-dependent Clp protease proteolytic ... 35 2.6
UniRef50_O26897 Cluster: Protease IV; n=1; Methanothermobacter t... 35 2.6
UniRef50_Q0BQI3 Cluster: Signal peptide peptidase sppA; n=1; Gra... 34 3.4
UniRef50_Q3LWK4 Cluster: Clp protease; n=1; Bigelowiella natans|... 33 5.9
UniRef50_A3AAH9 Cluster: Putative uncharacterized protein; n=3; ... 33 5.9
UniRef50_Q9KT38 Cluster: Putative uncharacterized protein VC1067... 33 7.9
UniRef50_A3X7W7 Cluster: Putative uncharacterized protein; n=2; ... 33 7.9
>UniRef50_Q16740 Cluster: Putative ATP-dependent Clp protease
proteolytic subunit, mitochondrial precursor; n=23;
cellular organisms|Rep: Putative ATP-dependent Clp
protease proteolytic subunit, mitochondrial precursor -
Homo sapiens (Human)
Length = 277
Score = 285 bits (700), Expect = 6e-76
Identities = 131/186 (70%), Positives = 157/186 (84%)
Frame = +2
Query: 215 ITNVYNVTRQINTSLPKLLGMIPIVVEQTGRGERAYDIYSRLLRERIICLMGPINDDISS 394
+ N + R ++ + + L +IPIVVEQTGRGERAYDIYSRLLRERI+C+MGPI+D ++S
Sbjct: 38 LQNGLALQRCLHATATRALPLIPIVVEQTGRGERAYDIYSRLLRERIVCVMGPIDDSVAS 97
Query: 395 LIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASL 574
L++AQLLFLQSES+KKP+H+YINSPGG VTAGL IYDTMQYI PI TWCVGQA SM SL
Sbjct: 98 LVIAQLLFLQSESNKKPIHMYINSPGGVVTAGLAIYDTMQYILNPICTWCVGQAASMGSL 157
Query: 575 LLAAGAPGMRHALPNSRIMIHQPSGGVRGQATDIQIQAEEILKLKAQINNLYVRHTGLXL 754
LLAAG PGMRH+LPNSRIMIHQPSGG RGQATDI IQAEEI+KLK Q+ N+Y +HT L
Sbjct: 158 LLAAGTPGMRHSLPNSRIMIHQPSGGARGQATDIAIQAEEIMKLKKQLYNIYAKHTKQSL 217
Query: 755 EKVQSS 772
+ ++S+
Sbjct: 218 QVIESA 223
>UniRef50_Q9VKY3 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=5; Endopterygota|Rep: ATP-dependent Clp
protease proteolytic subunit - Drosophila melanogaster
(Fruit fly)
Length = 253
Score = 274 bits (671), Expect = 2e-72
Identities = 125/165 (75%), Positives = 145/165 (87%)
Frame = +2
Query: 269 LGMIPIVVEQTGRGERAYDIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPV 448
+ +IP+VVEQTGRGERAYDI+SRLL+ERIICLMG I DDISS +VAQLLFLQSE+ KP+
Sbjct: 27 INLIPMVVEQTGRGERAYDIFSRLLKERIICLMGNITDDISSTVVAQLLFLQSENVNKPI 86
Query: 449 HLYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRI 628
HLYINSPGG VTAGL IYDTMQY+ PPIATWCVGQACSM SLLLAAGAPGMR++LPN+RI
Sbjct: 87 HLYINSPGGVVTAGLAIYDTMQYVKPPIATWCVGQACSMGSLLLAAGAPGMRYSLPNARI 146
Query: 629 MIHQPSGGVRGQATDIQIQAEEILKLKAQINNLYVRHTGLXLEKV 763
MIHQPSGG +GQATDI I AEEI+K+K Q+ N+YV+H E++
Sbjct: 147 MIHQPSGGAQGQATDILIHAEEIIKIKRQLTNIYVKHAKNTYEEM 191
>UniRef50_Q01HQ5 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=10; Eukaryota|Rep: ATP-dependent Clp protease
proteolytic subunit - Oryza sativa (Rice)
Length = 259
Score = 246 bits (602), Expect = 5e-64
Identities = 109/165 (66%), Positives = 138/165 (83%)
Frame = +2
Query: 272 GMIPIVVEQTGRGERAYDIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVH 451
G++P+V+E T RGERAYDI+SRLL+ERI+C+ GPI DD +SL+VAQLLFL+SE+ KPVH
Sbjct: 35 GLVPMVIEHTSRGERAYDIFSRLLKERIVCIHGPITDDTASLVVAQLLFLESENPAKPVH 94
Query: 452 LYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIM 631
LYINSPGG VTAGL IYDTMQYI P+ T C+GQA SMASLLLAAGA G R ALPN+R+M
Sbjct: 95 LYINSPGGVVTAGLAIYDTMQYIRSPVTTLCIGQAASMASLLLAAGARGERRALPNARVM 154
Query: 632 IHQPSGGVRGQATDIQIQAEEILKLKAQINNLYVRHTGLXLEKVQ 766
IHQPSGG GQA+DI I A+EILK++ ++N +Y +HT +++++
Sbjct: 155 IHQPSGGASGQASDIAIHAKEILKVRDRLNKIYAKHTSQAIDRIE 199
>UniRef50_Q1RJH2 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=6; Bacteria|Rep: ATP-dependent Clp protease
proteolytic subunit - Rickettsia bellii (strain
RML369-C)
Length = 227
Score = 237 bits (580), Expect = 2e-61
Identities = 107/168 (63%), Positives = 137/168 (81%)
Frame = +2
Query: 269 LGMIPIVVEQTGRGERAYDIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPV 448
+ +PIV+EQT RGERAYDIYSRLL+ERII + GPI D +++LI AQLLFL++E+ +K +
Sbjct: 23 MSYVPIVIEQTSRGERAYDIYSRLLKERIIFVCGPIEDHMANLITAQLLFLEAENPEKDI 82
Query: 449 HLYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRI 628
++YINSPGG VTAGL IYDTMQYI P +AT C+GQACSM S LL G GMR++LP+SR+
Sbjct: 83 YMYINSPGGVVTAGLAIYDTMQYIKPKVATLCIGQACSMGSFLLCGGEKGMRYSLPHSRV 142
Query: 629 MIHQPSGGVRGQATDIQIQAEEILKLKAQINNLYVRHTGLXLEKVQSS 772
MIHQPSGG RGQATDI+I A+E LK+K +N+LY +HTG ++ V+ S
Sbjct: 143 MIHQPSGGYRGQATDIEIHAQETLKIKKILNSLYSKHTGQDVKHVEKS 190
>UniRef50_Q8YHC8 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=235; cellular organisms|Rep: ATP-dependent
Clp protease proteolytic subunit - Brucella melitensis
Length = 209
Score = 225 bits (550), Expect = 9e-58
Identities = 98/167 (58%), Positives = 138/167 (82%)
Frame = +2
Query: 266 LLGMIPIVVEQTGRGERAYDIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKP 445
++ ++P+VVEQT RGERAYDI+SRLL+ERII + GP+ D +S L+ AQLLFL++E+ KK
Sbjct: 8 VMNLVPMVVEQTNRGERAYDIFSRLLKERIIFVNGPVEDGMSMLVCAQLLFLEAENPKKE 67
Query: 446 VHLYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSR 625
+++YINSPGG VT+G+ IYDTMQ+I PP++T C+GQA SM SLLL AGA G R+AL N+R
Sbjct: 68 INMYINSPGGVVTSGMAIYDTMQFIRPPVSTLCMGQAASMGSLLLTAGATGHRYALLNAR 127
Query: 626 IMIHQPSGGVRGQATDIQIQAEEILKLKAQINNLYVRHTGLXLEKVQ 766
IM+HQPSGG +GQA+DI+ A++I+K+K ++N +YV+HTG + ++
Sbjct: 128 IMVHQPSGGFQGQASDIERHAQDIIKMKRRLNEIYVKHTGRDYDTIE 174
>UniRef50_Q6G3Z3 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=256; cellular organisms|Rep: ATP-dependent
Clp protease proteolytic subunit - Bartonella henselae
(Rochalimaea henselae)
Length = 210
Score = 225 bits (549), Expect = 1e-57
Identities = 98/166 (59%), Positives = 135/166 (81%)
Frame = +2
Query: 269 LGMIPIVVEQTGRGERAYDIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPV 448
L ++P+V+EQT RGERAYDI+SRLL+ERII + GP+ D ++ L+ AQLLFL++E+ KK +
Sbjct: 9 LSLVPMVIEQTNRGERAYDIFSRLLKERIIFINGPVEDGMAMLVCAQLLFLEAENPKKEI 68
Query: 449 HLYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRI 628
LYINSPGG VT+G+ IYDTMQ+I PP++T C+GQA SM SLLL AGA G R LPN+RI
Sbjct: 69 SLYINSPGGVVTSGMAIYDTMQFIRPPVSTLCMGQAASMGSLLLTAGAKGHRFTLPNARI 128
Query: 629 MIHQPSGGVRGQATDIQIQAEEILKLKAQINNLYVRHTGLXLEKVQ 766
M+HQPSGG +GQA+DI+ A++I+K+K ++N +YV+HTG + ++
Sbjct: 129 MVHQPSGGFQGQASDIERHAQDIIKMKQRLNEIYVQHTGQNYDVIE 174
>UniRef50_O67357 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=54; cellular organisms|Rep: ATP-dependent Clp
protease proteolytic subunit - Aquifex aeolicus
Length = 201
Score = 225 bits (549), Expect = 1e-57
Identities = 103/163 (63%), Positives = 134/163 (82%)
Frame = +2
Query: 275 MIPIVVEQTGRGERAYDIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHL 454
++PIV+EQT RGERAYDIYSRLL++RI+ L PI+D +++LIVAQLLFL+S+ K ++L
Sbjct: 10 LVPIVIEQTPRGERAYDIYSRLLQDRIVLLGSPIDDHVANLIVAQLLFLESQDPDKDIYL 69
Query: 455 YINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMI 634
YINSPGG+VTAGL IYDTMQYI P + T C+GQA SM ++LLAAGAPG R+ALP+SRIMI
Sbjct: 70 YINSPGGSVTAGLAIYDTMQYIKPDVVTICMGQAASMGAILLAAGAPGKRYALPHSRIMI 129
Query: 635 HQPSGGVRGQATDIQIQAEEILKLKAQINNLYVRHTGLXLEKV 763
HQP GG++GQATDI I AEEI ++K + ++ +HTG +K+
Sbjct: 130 HQPLGGIQGQATDIIIHAEEIKRIKEMLIDILAKHTGQPKDKI 172
>UniRef50_Q8XYP7 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=9; cellular organisms|Rep: ATP-dependent Clp
protease proteolytic subunit - Ralstonia solanacearum
(Pseudomonas solanacearum)
Length = 217
Score = 223 bits (545), Expect = 4e-57
Identities = 101/165 (61%), Positives = 135/165 (81%)
Frame = +2
Query: 269 LGMIPIVVEQTGRGERAYDIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPV 448
LG++P+VVEQ+GRGERAYDIYSRLL+ER+I ++G +ND ++L+VAQLLFL+SE+ K +
Sbjct: 23 LGLVPMVVEQSGRGERAYDIYSRLLKERVIFMVGEVNDQTANLVVAQLLFLESENPDKDI 82
Query: 449 HLYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRI 628
LYINSPGG+V+AGL +YDTMQ++ P ++T C+G A SM + LLAAGA G R+ALPNSRI
Sbjct: 83 SLYINSPGGSVSAGLAMYDTMQFVKPDVSTLCMGMAASMGAFLLAAGAKGKRYALPNSRI 142
Query: 629 MIHQPSGGVRGQATDIQIQAEEILKLKAQINNLYVRHTGLXLEKV 763
MIHQP GG RGQA+DI+IQA EIL L+ ++N + TG ++K+
Sbjct: 143 MIHQPLGGARGQASDIEIQAREILYLRERLNTILSEVTGQPVDKI 187
>UniRef50_Q8RC25 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=4; Bacteria|Rep: ATP-dependent Clp protease
proteolytic subunit - Thermoanaerobacter tengcongensis
Length = 195
Score = 216 bits (527), Expect = 6e-55
Identities = 100/167 (59%), Positives = 131/167 (78%)
Frame = +2
Query: 269 LGMIPIVVEQTGRGERAYDIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPV 448
+ ++PIVVEQT RGERAYDI+SRLL++RI+ L IND +SL++AQ+LFL++E K +
Sbjct: 1 MSLVPIVVEQTNRGERAYDIFSRLLKDRIVFLGDEINDTTASLVIAQMLFLEAEDPDKDI 60
Query: 449 HLYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRI 628
LYINSPGG++TAGL IYDTMQYI P + T CVG A SMA+ LLAAGA G R ALPNS I
Sbjct: 61 WLYINSPGGSITAGLAIYDTMQYIKPDVVTLCVGMAASMAAFLLAAGAKGKRFALPNSEI 120
Query: 629 MIHQPSGGVRGQATDIQIQAEEILKLKAQINNLYVRHTGLXLEKVQS 769
MIHQP GG++GQATDI+I AE +L+L+ ++ + +TG LEK+++
Sbjct: 121 MIHQPWGGMQGQATDIKIHAERLLRLRDKLERILSENTGQPLEKIKA 167
>UniRef50_Q1IRD8 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=2; cellular organisms|Rep: ATP-dependent Clp
protease proteolytic subunit - Acidobacteria bacterium
(strain Ellin345)
Length = 194
Score = 210 bits (514), Expect = 2e-53
Identities = 97/165 (58%), Positives = 129/165 (78%), Gaps = 1/165 (0%)
Frame = +2
Query: 275 MIPIVVEQTGRGERAYDIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHL 454
++P+V+EQT RGERAYDIYSRLLR+ II L PI+D++++LI+AQ+LFL++E +K + L
Sbjct: 2 LVPMVIEQTSRGERAYDIYSRLLRDNIIFLGTPIDDNVANLIIAQMLFLEAEDPEKDISL 61
Query: 455 YINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMI 634
YINSPGG++TAG+ IYDTMQ+I P +AT C+GQ SM + LLA+GAPG R+ALP SRI+I
Sbjct: 62 YINSPGGSITAGMAIYDTMQFIRPDVATICIGQCASMGATLLASGAPGKRYALPTSRILI 121
Query: 635 HQP-SGGVRGQATDIQIQAEEILKLKAQINNLYVRHTGLXLEKVQ 766
HQP G+ GQATDI I A EIL+++ N L +H LEKV+
Sbjct: 122 HQPLMSGLSGQATDIDIHAREILRMREITNQLLAKHCNQRLEKVE 166
>UniRef50_Q8YQX8 Cluster: ATP-dependent Clp protease proteolytic
subunit 2; n=79; cellular organisms|Rep: ATP-dependent
Clp protease proteolytic subunit 2 - Anabaena sp.
(strain PCC 7120)
Length = 232
Score = 210 bits (512), Expect = 4e-53
Identities = 100/165 (60%), Positives = 127/165 (76%)
Frame = +2
Query: 275 MIPIVVEQTGRGERAYDIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHL 454
++P+VVEQ+G GERA+DIYSRLLRERII L PI+D +++ IVAQLLFL +E S+K + L
Sbjct: 29 IVPMVVEQSGMGERAFDIYSRLLRERIIFLGTPIDDAVANTIVAQLLFLDAEDSEKDIQL 88
Query: 455 YINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMI 634
YINSPGG+V AG+ IYDT+Q I P + T C G A SM + LL AG G R +LP+SRIMI
Sbjct: 89 YINSPGGSVYAGMAIYDTIQQIRPDVVTICFGLAASMGAFLLTAGTKGKRMSLPDSRIMI 148
Query: 635 HQPSGGVRGQATDIQIQAEEILKLKAQINNLYVRHTGLXLEKVQS 769
HQP GG +GQA DI+IQA EIL +KAQ+N L HTG LE++++
Sbjct: 149 HQPLGGAQGQAIDIEIQAREILYIKAQLNQLLANHTGQPLERIEA 193
>UniRef50_Q59993 Cluster: ATP-dependent Clp protease proteolytic
subunit 2; n=166; cellular organisms|Rep: ATP-dependent
Clp protease proteolytic subunit 2 - Synechocystis sp.
(strain PCC 6803)
Length = 226
Score = 206 bits (502), Expect = 6e-52
Identities = 98/164 (59%), Positives = 124/164 (75%)
Frame = +2
Query: 275 MIPIVVEQTGRGERAYDIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHL 454
++P+VVEQ+G GERA+DIYSRLLRERII L P++D ++ IVAQLLFL +E +K + L
Sbjct: 23 VVPMVVEQSGMGERAFDIYSRLLRERIIFLGTPVDDQVADSIVAQLLFLDAEDPEKDIQL 82
Query: 455 YINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMI 634
YINSPGG+V AGL IYDTMQ I P + T C G A SM + LL+ G G R ALP+SRIMI
Sbjct: 83 YINSPGGSVYAGLAIYDTMQQIRPDVVTICFGLAASMGAFLLSGGCKGKRMALPSSRIMI 142
Query: 635 HQPSGGVRGQATDIQIQAEEILKLKAQINNLYVRHTGLXLEKVQ 766
HQP GG +GQA +I+IQA EIL +K ++N + V HTG +EK+Q
Sbjct: 143 HQPLGGAQGQAVEIEIQAREILYIKDRLNTMLVEHTGQPMEKLQ 186
>UniRef50_Q2UPZ9 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=7; Eurotiomycetidae|Rep: ATP-dependent Clp
protease proteolytic subunit - Aspergillus oryzae
Length = 267
Score = 185 bits (450), Expect = 1e-45
Identities = 88/145 (60%), Positives = 115/145 (79%), Gaps = 4/145 (2%)
Frame = +2
Query: 344 RERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIYDTMQYIT 523
+ERIICL G +++ +S+ IVAQLLFL++++ +KP+HLYINSPGG+VTAGL IYDTM YI
Sbjct: 79 QERIICLNGEVDETMSASIVAQLLFLEADNPQKPIHLYINSPGGSVTAGLAIYDTMTYIA 138
Query: 524 PPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQPSGGVRGQATDIQIQAEEILK 703
P++T CVGQA SM SLLL G PG R+ LP+S IMIHQPSGG GQATDI I A+EIL+
Sbjct: 139 SPVSTICVGQAASMGSLLLCGGHPGKRYCLPHSSIMIHQPSGGYFGQATDIAIHAKEILR 198
Query: 704 LKAQINNLYVRH-TG---LXLEKVQ 766
++ Q+N +Y RH TG L L++++
Sbjct: 199 VREQLNKIYKRHLTGKKELSLDEIE 223
>UniRef50_A4R250 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=8; Pezizomycotina|Rep: ATP-dependent Clp
protease proteolytic subunit - Magnaporthe grisea (Rice
blast fungus) (Pyricularia grisea)
Length = 274
Score = 185 bits (450), Expect = 1e-45
Identities = 93/195 (47%), Positives = 133/195 (68%), Gaps = 3/195 (1%)
Frame = +2
Query: 164 TMALSSIGRVG--RRLCVGITNVYNVTRQINTSLPKLLGM-IPIVVEQTGRGERAYDIYS 334
T S+ RV +R + ++N R + S P G+ +P+V E T G R DI+S
Sbjct: 12 TRGAPSVSRVAACQRASLNLSNA----RSFSHSRPPQAGVPMPLVTEVTAGGWRTSDIFS 67
Query: 335 RLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIYDTMQ 514
+LL+ERI+CL GPI+D + + AQLL+L+ +S KP+ LYINSPGG V++GL IYDTM
Sbjct: 68 KLLQERIVCLNGPIDDWTQASVTAQLLWLEQDSPHKPITLYINSPGGQVSSGLAIYDTMN 127
Query: 515 YITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQPSGGVRGQATDIQIQAEE 694
YI+ P+ T CVG A SM ++LL GA G R+ALP+S+IM+HQP G +GQA+DI I A++
Sbjct: 128 YISSPVHTVCVGMAASMGAILLLGGAAGQRYALPHSQIMVHQPLGSTQGQASDIIIYAKQ 187
Query: 695 ILKLKAQINNLYVRH 739
I ++++QIN++ RH
Sbjct: 188 ITRIRSQINDIMRRH 202
>UniRef50_Q8DST7 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=37; Bacteria|Rep: ATP-dependent Clp protease
proteolytic subunit - Streptococcus mutans
Length = 196
Score = 171 bits (417), Expect = 1e-41
Identities = 78/165 (47%), Positives = 120/165 (72%), Gaps = 2/165 (1%)
Frame = +2
Query: 275 MIPIVVEQTGRGERAYDIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHL 454
MIP+V+EQT RGER+YDIYSRLL++RII L GP+ D++++ I+AQLLFL ++ + K ++L
Sbjct: 1 MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSIIAQLLFLDAQDNTKDIYL 60
Query: 455 YINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMI 634
YINSPGG+V+AGL I DTM +I + T +G A SM +++ ++GA G R LPN+ +I
Sbjct: 61 YINSPGGSVSAGLAIVDTMNFIKSDVQTIVMGIAASMGTIIASSGAKGKRFMLPNAEYLI 120
Query: 635 HQPSGGVRG--QATDIQIQAEEILKLKAQINNLYVRHTGLXLEKV 763
HQP GG G Q +D+ I AE++LK + ++ + ++G ++++
Sbjct: 121 HQPMGGTGGGTQQSDMAIAAEQLLKTRKKLEKILSDNSGKTIKQI 165
>UniRef50_Q7MX09 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=23; Bacteroidetes|Rep: ATP-dependent Clp
protease proteolytic subunit - Porphyromonas gingivalis
(Bacteroides gingivalis)
Length = 222
Score = 165 bits (401), Expect = 1e-39
Identities = 79/162 (48%), Positives = 113/162 (69%)
Frame = +2
Query: 281 PIVVEQTGRGERAYDIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYI 460
P ++E+ D++SRL+ +RII L I+D +++I AQLL+L S K + +Y+
Sbjct: 32 PTIIEERQLNVAQMDVFSRLMMDRIIFLGTQIDDYTANVIQAQLLYLDSADPGKDISIYL 91
Query: 461 NSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQ 640
NSPGG+V AG GIYDTMQYI +AT C G A SMAS+LL AG G R ALP+SR+MIHQ
Sbjct: 92 NSPGGSVYAGYGIYDTMQYIGCDVATICTGMAASMASVLLVAGTKGKRFALPHSRVMIHQ 151
Query: 641 PSGGVRGQATDIQIQAEEILKLKAQINNLYVRHTGLXLEKVQ 766
P GG++GQA+D++I A EIL++K ++ + H+G +E+V+
Sbjct: 152 PLGGMQGQASDLEIAAREILRVKKELYTIISSHSGKPVEQVE 193
>UniRef50_Q82NZ3 Cluster: ATP-dependent Clp protease proteolytic
subunit 2; n=8; Bacteria|Rep: ATP-dependent Clp protease
proteolytic subunit 2 - Streptomyces avermitilis
Length = 200
Score = 163 bits (397), Expect = 3e-39
Identities = 74/156 (47%), Positives = 118/156 (75%), Gaps = 1/156 (0%)
Frame = +2
Query: 278 IPIVVEQTGRGERAYDIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLY 457
IP VVE+T +GER+YD++SRLL ERII L I+D ++++++AQLL L+S + + + +Y
Sbjct: 6 IPNVVERTPQGERSYDVFSRLLSERIIFLGTEIDDGVANVVIAQLLHLESANPEHEIAIY 65
Query: 458 INSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIH 637
INSPGG+ T+ + IYDTM ++ PI+T+CVGQA S A++LLA G PG R L ++R+++
Sbjct: 66 INSPGGSFTSLMAIYDTMTFVQAPISTFCVGQAASTAAVLLAGGDPGRRFVLEHARVLLG 125
Query: 638 QP-SGGVRGQATDIQIQAEEILKLKAQINNLYVRHT 742
QP SGG +G +D+ +QA+E++++++Q+ + RHT
Sbjct: 126 QPASGGRQGTVSDLSLQAKEMIRIRSQVEEVLSRHT 161
>UniRef50_UPI0000DB7F4F Cluster: PREDICTED: similar to Putative
ATP-dependent Clp protease proteolytic subunit,
mitochondrial precursor (Endopeptidase Clp), partial;
n=1; Apis mellifera|Rep: PREDICTED: similar to Putative
ATP-dependent Clp protease proteolytic subunit,
mitochondrial precursor (Endopeptidase Clp), partial -
Apis mellifera
Length = 222
Score = 163 bits (396), Expect = 4e-39
Identities = 76/117 (64%), Positives = 93/117 (79%)
Frame = +2
Query: 275 MIPIVVEQTGRGERAYDIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHL 454
++P+VVEQT RGERA+DIYSRLL+ERII L GP+ D ++SLI AQLL+L+S + KK +
Sbjct: 106 LVPMVVEQTSRGERAFDIYSRLLKERIIFLTGPVYDQVASLISAQLLYLESVNPKKEISF 165
Query: 455 YINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSR 625
YINSPGG V+AGL IYDTMQYI P++T C+GQA SM SLLL G P R ALPN+R
Sbjct: 166 YINSPGGVVSAGLAIYDTMQYIRCPVSTVCIGQAASMGSLLLCGGEPNNRFALPNAR 222
>UniRef50_Q7UK67 Cluster: ATP-dependent Clp protease proteolytic
subunit 1; n=2; Planctomycetaceae|Rep: ATP-dependent Clp
protease proteolytic subunit 1 - Rhodopirellula baltica
Length = 227
Score = 163 bits (395), Expect = 6e-39
Identities = 76/156 (48%), Positives = 111/156 (71%)
Frame = +2
Query: 296 QTGRGERAYDIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPGG 475
Q+ + +R + LL RI+ + G I+ ++ IV +LL+LQSE+ +K +HLYINSPGG
Sbjct: 36 QSYQRQRQMTLGDLLLENRIVFMQGEIHYANANEIVMKLLYLQSENRRKDIHLYINSPGG 95
Query: 476 AVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQPSGGV 655
+VTA L IYDTMQ ++ P+AT+CVG+ACS A++LL GA G R LPNSR+M+HQP GGV
Sbjct: 96 SVTATLAIYDTMQMLSCPVATYCVGEACSGAAVLLIGGAKGKRFCLPNSRVMMHQPLGGV 155
Query: 656 RGQATDIQIQAEEILKLKAQINNLYVRHTGLXLEKV 763
GQ +DI+IQA E+ + + ++N + H G +E++
Sbjct: 156 SGQVSDIEIQAAEMFRYRDKLNEIISSHCGKSVEQI 191
>UniRef50_Q9ZH58 Cluster: ATP-dependent Clp protease proteolytic
subunit 2; n=67; Actinobacteria (class)|Rep:
ATP-dependent Clp protease proteolytic subunit 2 -
Streptomyces coelicolor
Length = 218
Score = 162 bits (393), Expect = 1e-38
Identities = 78/165 (47%), Positives = 116/165 (70%), Gaps = 1/165 (0%)
Frame = +2
Query: 275 MIPIVVEQTGRGERAYDIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHL 454
+IP VE+T +G R YD Y++L ER+I L I+D ++ ++AQLL L+S + + +
Sbjct: 19 VIPRFVERTSQGVREYDPYAKLFEERVIFLGVQIDDASANDVMAQLLCLESMDPDRDISV 78
Query: 455 YINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMI 634
YINSPGG+ TA IYDTMQY+ P + T C+GQA S A++LLAAG PG R ALPN+R++I
Sbjct: 79 YINSPGGSFTALTAIYDTMQYVKPDVQTVCMGQAASAAAVLLAAGTPGKRMALPNARVLI 138
Query: 635 HQP-SGGVRGQATDIQIQAEEILKLKAQINNLYVRHTGLXLEKVQ 766
HQP S RGQ +D++I A EIL++++Q+ + +H+ +EK++
Sbjct: 139 HQPYSETGRGQVSDLEIAANEILRMRSQLEEMLAKHSTTPVEKIR 183
>UniRef50_Q70AH6 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=3; Oenococcus oeni|Rep: ATP-dependent Clp
protease proteolytic subunit - Oenococcus oeni
(Leuconostoc oenos)
Length = 202
Score = 158 bits (384), Expect = 1e-37
Identities = 73/166 (43%), Positives = 113/166 (68%), Gaps = 2/166 (1%)
Frame = +2
Query: 275 MIPIVVEQTGRGERAYDIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHL 454
M P V+EQT G +YD+ SRLL++RII + G + D +++ IVAQLLFL ++ K +++
Sbjct: 1 MWPGVIEQTANGRESYDLPSRLLKDRIILVQGEVEDQMATSIVAQLLFLDAQDPNKDIYM 60
Query: 455 YINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMI 634
YINSPGG+VTAG+ I DTM +I + T +G A SMA+++ ++G G R LPN+ +I
Sbjct: 61 YINSPGGSVTAGMAIVDTMNFIRSDVQTIVMGMAASMATIIASSGTKGKRFMLPNAEYLI 120
Query: 635 HQPSGGVRG--QATDIQIQAEEILKLKAQINNLYVRHTGLXLEKVQ 766
HQP GG Q TD+ I A+++LK + ++NN+ ++G +EK++
Sbjct: 121 HQPMGGAGAGTQQTDMSIIADQLLKTRKRLNNILKENSGKPIEKIE 166
>UniRef50_Q7NEW1 Cluster: ATP-dependent Clp protease proteolytic
subunit 2; n=23; Cyanobacteria|Rep: ATP-dependent Clp
protease proteolytic subunit 2 - Gloeobacter violaceus
Length = 218
Score = 157 bits (382), Expect = 2e-37
Identities = 75/149 (50%), Positives = 106/149 (71%), Gaps = 2/149 (1%)
Frame = +2
Query: 323 DIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPG--GAVTAGLG 496
D+ S LL ERI+ L PIND ++ L++AQLL+L+SE + KP+ +YINSPG G T+
Sbjct: 28 DLPSLLLNERIVYLGTPINDVVAELLIAQLLYLESEDNAKPIEIYINSPGVAGFETSAFA 87
Query: 497 IYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQPSGGVRGQATDI 676
+YDTM+++ PI T C+G A ++LL+AAG G R +LPNSRI+++QP GG RGQATDI
Sbjct: 88 VYDTMRHVRMPIKTICLGLAGGFSALLMAAGTKGQRMSLPNSRIILYQPYGGARGQATDI 147
Query: 677 QIQAEEILKLKAQINNLYVRHTGLXLEKV 763
I+A+E+L K +N L HTG +E++
Sbjct: 148 NIRAQELLTTKRTLNQLLSIHTGKTVEQI 176
>UniRef50_Q9FCC9 Cluster: Putative ATP-dependent Clp protease
proteolytic subunit-like; n=2; Streptomyces|Rep:
Putative ATP-dependent Clp protease proteolytic
subunit-like - Streptomyces coelicolor
Length = 211
Score = 154 bits (374), Expect = 2e-36
Identities = 71/164 (43%), Positives = 113/164 (68%), Gaps = 2/164 (1%)
Frame = +2
Query: 260 PKLLGMIPIVVEQTGRGERAYDIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSK 439
P ++P E+T G R D YS+LL+ERI+ L P+++ ++ + AQL++L+ ++
Sbjct: 4 PSARHVLPEFTERTSAGTRTSDPYSKLLQERIVFLGTPVDETSANDVTAQLMYLEHQAPD 63
Query: 440 KPVHLYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPN 619
+ + LY+NSPGG+ TA IYDTM+Y+ +AT C+GQA A++LLAAG PG R ALP
Sbjct: 64 RDIELYVNSPGGSFTAMTAIYDTMRYVACDVATTCLGQAGPSAAVLLAAGTPGKRAALPG 123
Query: 620 SRIMIHQP--SGGVRGQATDIQIQAEEILKLKAQINNLYVRHTG 745
+R+++HQP + VRGQA D+ + A E+++++A++ + VRHTG
Sbjct: 124 ARVVLHQPALTEPVRGQAGDLAVHAAELVRVRARLEEILVRHTG 167
>UniRef50_P56317 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=17; Viridiplantae|Rep: ATP-dependent Clp
protease proteolytic subunit - Chlorella vulgaris (Green
alga)
Length = 201
Score = 154 bits (373), Expect = 3e-36
Identities = 64/147 (43%), Positives = 104/147 (70%)
Frame = +2
Query: 323 DIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIY 502
D+Y+RL RER++ L ++D++++ ++ +L+L +E K +++YINSPGG+VT G+ +Y
Sbjct: 22 DLYNRLYRERVLFLCQELDDELANQLIGIMLYLNAEEQNKGLYIYINSPGGSVTCGIAVY 81
Query: 503 DTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQPSGGVRGQATDIQI 682
D M YI + T CVG A SMAS +LA G G R ALP+SRIM+HQP GG +GQA+++
Sbjct: 82 DAMNYIKSEVTTICVGTAASMASFILAGGDRGKRIALPHSRIMVHQPEGGSQGQASEVLS 141
Query: 683 QAEEILKLKAQINNLYVRHTGLXLEKV 763
+++E+++++ Q+ +Y TG L +V
Sbjct: 142 ESQEVMRIRRQVGRIYSERTGQTLSRV 168
>UniRef50_A4RXD2 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=3; cellular organisms|Rep: ATP-dependent Clp
protease proteolytic subunit - Ostreococcus lucimarinus
CCE9901
Length = 319
Score = 151 bits (366), Expect = 2e-35
Identities = 69/145 (47%), Positives = 99/145 (68%)
Frame = +2
Query: 329 YSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIYDT 508
+ LLR RI+ L ++D + +++QLL L + K + L+INSPGG+VTAG+GIYD
Sbjct: 101 FDSLLRNRIVFLGSQVDDFNADAVISQLLLLDQQDPTKEIKLFINSPGGSVTAGMGIYDA 160
Query: 509 MQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQPSGGVRGQATDIQIQA 688
MQ+ P++T C+G A SM + LLA+G G R ++PN+RIMIHQP GG +G A DI+IQA
Sbjct: 161 MQFCRAPVSTVCLGLAASMGAFLLASGEKGRRMSMPNARIMIHQPLGGAQGSAVDIEIQA 220
Query: 689 EEILKLKAQINNLYVRHTGLXLEKV 763
+EI+ KA +N L HTG ++ +
Sbjct: 221 KEIMHHKANLNRLMAFHTGQDVKTI 245
>UniRef50_UPI0000D9E9DE Cluster: PREDICTED: ClpP caseinolytic
peptidase, ATP-dependent, proteolytic subunit homolog
(E. coli); n=1; Macaca mulatta|Rep: PREDICTED: ClpP
caseinolytic peptidase, ATP-dependent, proteolytic
subunit homolog (E. coli) - Macaca mulatta
Length = 270
Score = 149 bits (361), Expect = 8e-35
Identities = 80/163 (49%), Positives = 105/163 (64%)
Frame = +2
Query: 239 RQINTSLPKLLGMIPIVVEQTGRGERAYDIYSRLLRERIICLMGPINDDISSLIVAQLLF 418
R ++ + + L +IPIVVEQTGRGERAYDIYSRLLRERI+C+MGPI+D ++SL++AQLLF
Sbjct: 46 RSLHATAARALPLIPIVVEQTGRGERAYDIYSRLLRERIVCVMGPIDDSVASLVIAQLLF 105
Query: 419 LQSESSKKPVHLYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPG 598
LQSES+KKP+H+YINSPG A LG Q T GQ CS++ A PG
Sbjct: 106 LQSESNKKPIHMYINSPGEQAGAFLGARGACQGARVTQGTRIPGQGCSLSGKGCRASDPG 165
Query: 599 MRHALPNSRIMIHQPSGGVRGQATDIQIQAEEILKLKAQINNL 727
R LP + +GG RGQ I I A + L+ + +++
Sbjct: 166 GRARLP----LWEAETGGSRGQEIKI-ILANTVKPLETEFHHV 203
>UniRef50_Q2J9A8 Cluster: ATP-dependent Clp protease proteolytic
subunit 4; n=89; Bacteria|Rep: ATP-dependent Clp
protease proteolytic subunit 4 - Frankia sp. (strain
CcI3)
Length = 238
Score = 148 bits (359), Expect = 1e-34
Identities = 71/157 (45%), Positives = 102/157 (64%)
Frame = +2
Query: 299 TGRGERAYDIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPGGA 478
+G G ++SRLL RI+ L + D +++ I A+LL L +E ++LYINSPGG+
Sbjct: 26 SGLGSADDQVFSRLLENRIVFLGSVVEDAVANAISAKLLLLAAEDPAADIYLYINSPGGS 85
Query: 479 VTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQPSGGVR 658
V+AG+ IYDTMQY+ +AT +G A SM LL AG G R+ALP++RIM+HQP GG+
Sbjct: 86 VSAGMAIYDTMQYVGNDVATVALGLAGSMGQFLLCAGTAGKRYALPHARIMMHQPHGGIG 145
Query: 659 GQATDIQIQAEEILKLKAQINNLYVRHTGLXLEKVQS 769
G A DI IQAE++L K + HTG +E++++
Sbjct: 146 GTAADISIQAEQMLYTKRTLQERIAFHTGQTVEQIET 182
>UniRef50_Q9MUV8 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=9; Viridiplantae|Rep: ATP-dependent Clp
protease proteolytic subunit - Mesostigma viride
Length = 229
Score = 146 bits (354), Expect = 5e-34
Identities = 67/167 (40%), Positives = 108/167 (64%), Gaps = 1/167 (0%)
Frame = +2
Query: 269 LGMIPIVVEQTGRGERAY-DIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKP 445
+G+ + G Y D+Y+RL RERI+ L ++D++++ ++ ++FL SE K
Sbjct: 3 IGIPKVAYRIPGEAVSTYVDVYNRLYRERILFLGEDLDDEVANQLIGVMVFLNSEDDTKG 62
Query: 446 VHLYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSR 625
+ YINSPGG++ AGLG+YD +Q++ + T C+G A SMAS +LA G PG R P++R
Sbjct: 63 IFFYINSPGGSMNAGLGVYDMIQHVNVDVTTICMGLAASMASFILAGGTPGQRLMFPHAR 122
Query: 626 IMIHQPSGGVRGQATDIQIQAEEILKLKAQINNLYVRHTGLXLEKVQ 766
+M+HQP GG G+A + ++ E+ +L+ I +LYV+ TG LEK++
Sbjct: 123 VMLHQPMGGNGGKAKYMVEESVEVKRLRELIAHLYVKRTGQSLEKIR 169
>UniRef50_A7ATV1 Cluster: ATP-dependent Clp protease proteolytic
subunit 1, putative; n=1; Babesia bovis|Rep:
ATP-dependent Clp protease proteolytic subunit 1,
putative - Babesia bovis
Length = 225
Score = 144 bits (348), Expect = 3e-33
Identities = 67/142 (47%), Positives = 96/142 (67%)
Frame = +2
Query: 341 LRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIYDTMQYI 520
+R R + L G +ND+ S ++ Q+ + E+ + + YINSPGG+V+AGL IYD +Q +
Sbjct: 44 IRTRTLFLSGELNDEKSYRLINQIFRMNEENPNENIKFYINSPGGSVSAGLAIYDILQSL 103
Query: 521 TPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQPSGGVRGQATDIQIQAEEIL 700
+ T C+GQA SM + LLAAGA G+R A+PNSRIMIHQP GG G+ TDI+IQA EIL
Sbjct: 104 KMRVETICIGQAASMGAFLLAAGAKGLRSAMPNSRIMIHQPLGGAHGEVTDIKIQANEIL 163
Query: 701 KLKAQINNLYVRHTGLXLEKVQ 766
++ +N + TG +E+V+
Sbjct: 164 HIRQILNAHFSHFTGKSIEQVE 185
>UniRef50_A1SKA5 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=2; Actinomycetales|Rep: ATP-dependent Clp
protease proteolytic subunit - Nocardioides sp. (strain
BAA-499 / JS614)
Length = 200
Score = 141 bits (341), Expect = 2e-32
Identities = 68/144 (47%), Positives = 97/144 (67%)
Frame = +2
Query: 335 RLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIYDTMQ 514
RLL +RII L ++DDI++ + A+LL L +E + + LYINSPGG+V+AGL IYDTM+
Sbjct: 15 RLLHQRIIVLGQQVDDDIANKLCAELLLLSAEDPHRDIALYINSPGGSVSAGLAIYDTMR 74
Query: 515 YITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQPSGGVRGQATDIQIQAEE 694
I ++T +G A SM LL+AG PG R+ALP+SR+++HQ S G+ G A DI+IQAE
Sbjct: 75 LIPNDVSTLAMGLAASMGQFLLSAGTPGKRYALPHSRVLMHQGSAGIGGTAIDIEIQAEN 134
Query: 695 ILKLKAQINNLYVRHTGLXLEKVQ 766
+ K + L HTG +E ++
Sbjct: 135 LEHTKNVMTGLIAEHTGQPVEVIE 158
>UniRef50_A7PR54 Cluster: Chromosome chr14 scaffold_26, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr14 scaffold_26, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 320
Score = 140 bits (339), Expect = 3e-32
Identities = 65/149 (43%), Positives = 102/149 (68%)
Frame = +2
Query: 323 DIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIY 502
D + LLR+RI+ L ++D + L+++QLLFL +E +K + L+INSPGG+VTAGLGIY
Sbjct: 81 DTTNMLLRQRIVFLGSQVDDMTADLVISQLLFLDAEDQEKDIKLFINSPGGSVTAGLGIY 140
Query: 503 DTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQPSGGVRGQATDIQI 682
D M+ ++T C+G A SM + LLA+G+ G R +PNSR+MIHQP G G+AT++ I
Sbjct: 141 DAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNSRVMIHQPLGTAGGKATEMGI 200
Query: 683 QAEEILKLKAQINNLYVRHTGLXLEKVQS 769
+ E++ K ++N + R TG +++++
Sbjct: 201 RIREMMYHKIKLNKILSRITGKPEQQIEA 229
>UniRef50_O82421 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=11; Magnoliophyta|Rep: ATP-dependent Clp
protease proteolytic subunit - Arabidopsis thaliana
(Mouse-ear cress)
Length = 310
Score = 139 bits (337), Expect = 6e-32
Identities = 62/149 (41%), Positives = 103/149 (69%)
Frame = +2
Query: 323 DIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIY 502
D + LLR+RI+ L ++D + L+++QLL L +E S++ + L+INSPGG++TAG+GIY
Sbjct: 86 DTTNMLLRQRIVFLGSQVDDMTADLVISQLLLLDAEDSERDITLFINSPGGSITAGMGIY 145
Query: 503 DTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQPSGGVRGQATDIQI 682
D M+ ++T C+G A SM + LLA+G+ G R+ +PNS++MIHQP G G+AT++ I
Sbjct: 146 DAMKQCKADVSTVCLGLAASMGAFLLASGSKGKRYCMPNSKVMIHQPLGTAGGKATEMSI 205
Query: 683 QAEEILKLKAQINNLYVRHTGLXLEKVQS 769
+ E++ K ++N ++ R TG +++S
Sbjct: 206 RIREMMYHKIKLNKIFSRITGKPESEIES 234
>UniRef50_A7AQC7 Cluster: ATP-dependent Clp protease proteolytic
subunit, putative; n=2; Babesia bovis|Rep: ATP-dependent
Clp protease proteolytic subunit, putative - Babesia
bovis
Length = 245
Score = 136 bits (330), Expect = 4e-31
Identities = 68/164 (41%), Positives = 111/164 (67%), Gaps = 2/164 (1%)
Frame = +2
Query: 278 IPIVVEQTGRGERA--YDIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVH 451
+P+V + +R+ +DI++RL RERI+ + +++ +++I+ LL L S+S++KP+
Sbjct: 51 VPLVEYKIPGTQRSEFHDIHTRLYRERILFVSQSLDESYTNMIIGTLLCLDSDSNEKPIT 110
Query: 452 LYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIM 631
LYINS GG TAG+ +YDT++++ IAT VG + ASLLLA+G PGMR ALP+SR++
Sbjct: 111 LYINSQGGPSTAGITLYDTIKHLKSKIATINVGFCSATASLLLASGTPGMRSALPHSRVV 170
Query: 632 IHQPSGGVRGQATDIQIQAEEILKLKAQINNLYVRHTGLXLEKV 763
+HQP+G + G A I+ QA+ +L +K + LY + T L+ +
Sbjct: 171 MHQPAGTLEGSAEQIRSQAQYMLNMKRILQKLYSQVTNQPLDNI 214
>UniRef50_P56772 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=39; cellular organisms|Rep: ATP-dependent Clp
protease proteolytic subunit - Arabidopsis thaliana
(Mouse-ear cress)
Length = 196
Score = 134 bits (325), Expect = 2e-30
Identities = 65/161 (40%), Positives = 104/161 (64%), Gaps = 2/161 (1%)
Frame = +2
Query: 269 LGMIPIVVEQTGRGERAY-DIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKP 445
+G+ + G G+ ++ DIY+RL RER+ L ++ +IS+ +++ +++L E K
Sbjct: 3 IGVPKVPFRSPGEGDTSWVDIYNRLYRERLFFLGQEVDTEISNQLISLMIYLSIEKDTKD 62
Query: 446 VHLYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSR 625
++L+INSPGG V +G+ IYDTMQ++ P + T C+G A S+AS +L GA R A P++R
Sbjct: 63 LYLFINSPGGWVISGMAIYDTMQFVRPDVQTICMGLAASIASFILVGGAITKRIAFPHAR 122
Query: 626 IMIHQP-SGGVRGQATDIQIQAEEILKLKAQINNLYVRHTG 745
+MIHQP S Q + ++AEE+LKL+ I +YV+ TG
Sbjct: 123 VMIHQPASSFYEAQTGEFILEAEELLKLRETITRVYVQRTG 163
>UniRef50_Q98RW7 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=17; cellular organisms|Rep: ATP-dependent Clp
protease proteolytic subunit - Guillardia theta
(Cryptomonas phi)
Length = 254
Score = 134 bits (323), Expect = 3e-30
Identities = 72/156 (46%), Positives = 97/156 (62%), Gaps = 9/156 (5%)
Frame = +2
Query: 323 DIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPG---------G 475
D+ S LL RI+ L P+ ++ LIVA+ L+LQ E+S+KPV++Y+NS G G
Sbjct: 59 DLPSLLLHNRIVYLGMPLVPAVTELIVAEFLYLQYENSEKPVYMYLNSTGTSNPDGSSAG 118
Query: 476 AVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQPSGGV 655
T I DTM YI PP+ T CVGQA ++LL++G PG R ALPN+ IMIHQP+
Sbjct: 119 FETEAFAIADTMNYIKPPVHTICVGQAFGTCAMLLSSGEPGQRAALPNATIMIHQPTSRA 178
Query: 656 RGQATDIQIQAEEILKLKAQINNLYVRHTGLXLEKV 763
RGQA+DI I+A E+L + Q + +G LEKV
Sbjct: 179 RGQASDIAIKAREVLYNRKQCFEILAETSGQSLEKV 214
>UniRef50_A2XFV5 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=2; Oryza sativa (indica cultivar-group)|Rep:
ATP-dependent Clp protease proteolytic subunit - Oryza
sativa subsp. indica (Rice)
Length = 459
Score = 133 bits (321), Expect = 5e-30
Identities = 58/104 (55%), Positives = 79/104 (75%)
Frame = +2
Query: 452 LYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIM 631
+Y+NSPGG+VTAG+ I+DTM++I P ++T C+G A SM + LL+AG G R++LPNSRIM
Sbjct: 317 MYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCIGLAASMGAFLLSAGTKGKRYSLPNSRIM 376
Query: 632 IHQPSGGVRGQATDIQIQAEEILKLKAQINNLYVRHTGLXLEKV 763
IHQP GG +GQ TD++IQA E+L KA +N HTG L+K+
Sbjct: 377 IHQPLGGAQGQETDLEIQANEMLHHKANLNGYLAYHTGQPLDKI 420
>UniRef50_Q72R01 Cluster: ATP-dependent Clp protease proteolytic
subunit 2; n=5; Bacteria|Rep: ATP-dependent Clp protease
proteolytic subunit 2 - Leptospira interrogans serogroup
Icterohaemorrhagiae serovarcopenhageni
Length = 197
Score = 131 bits (317), Expect = 2e-29
Identities = 65/149 (43%), Positives = 94/149 (63%), Gaps = 2/149 (1%)
Frame = +2
Query: 326 IYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIYD 505
I L R I L GP+ D+ S +V +LL+L+ + K + YINSPGG VT+G+ ++D
Sbjct: 19 ISKNFLDHRKIFLWGPVTDESSKDLVGKLLYLEMKDPGKKITFYINSPGGVVTSGMTVFD 78
Query: 506 TMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQPS--GGVRGQATDIQ 679
T++ I+ P+ T C+G A SM S+LLAAG G R PN ++MIHQPS G + ATD++
Sbjct: 79 TIKMISSPVHTVCMGMAASMGSVLLAAGTKGERSIWPNGKVMIHQPSIGGQIVAPATDLK 138
Query: 680 IQAEEILKLKAQINNLYVRHTGLXLEKVQ 766
I AEEILK K ++N + G + K++
Sbjct: 139 IHAEEILKTKTKLNQILADACGHPISKLE 167
>UniRef50_A7CRR7 Cluster: Endopeptidase Clp; n=1; Opitutaceae
bacterium TAV2|Rep: Endopeptidase Clp - Opitutaceae
bacterium TAV2
Length = 248
Score = 129 bits (311), Expect = 9e-29
Identities = 64/148 (43%), Positives = 94/148 (63%), Gaps = 2/148 (1%)
Frame = +2
Query: 326 IYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIYD 505
I + L +R I L G + D+ + I +LL+L++ + K + YINSPGG++TAG+ IYD
Sbjct: 73 IQKKFLEQRKIFLWGAVTDESAKDITERLLYLEAIAPGKDITFYINSPGGSITAGMAIYD 132
Query: 506 TMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQP--SGGVRGQATDIQ 679
TMQ I+ PI G A SM S+LL+ G R P+SR++IHQP SG G ATDI
Sbjct: 133 TMQLISSPITVVVTGMAASMGSILLSGAPKGRRFLYPHSRVLIHQPLISGRFIGPATDIN 192
Query: 680 IQAEEILKLKAQINNLYVRHTGLXLEKV 763
IQA+E+ KL+A++N + +G +E++
Sbjct: 193 IQAQEMEKLRAELNQILANASGQPIERI 220
>UniRef50_Q93ZD4 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=8; Magnoliophyta|Rep: ATP-dependent Clp
protease proteolytic subunit - Arabidopsis thaliana
(Mouse-ear cress)
Length = 279
Score = 127 bits (307), Expect = 3e-28
Identities = 60/147 (40%), Positives = 96/147 (65%)
Frame = +2
Query: 323 DIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIY 502
DI++ L RER+I + I+++ S+ I+A +L+L + + +++Y+N PGG +T L IY
Sbjct: 89 DIWNALYRERVIFIGQNIDEEFSNQILATMLYLDTLDGSRRIYMYLNGPGGDLTPSLAIY 148
Query: 503 DTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQPSGGVRGQATDIQI 682
DTM+ + P+ T CVG A ++A LLAAG G R A+P SRI + P+G RGQA DIQ
Sbjct: 149 DTMKSLKSPVGTHCVGLAYNLAGFLLAAGEKGHRFAMPLSRIALQSPAGAARGQADDIQN 208
Query: 683 QAEEILKLKAQINNLYVRHTGLXLEKV 763
+A+E+ +++ + N ++TG E+V
Sbjct: 209 EAKELSRIRDYLFNELAKNTGQPAERV 235
>UniRef50_Q8LB10 Cluster: ATP-dependent Clp protease proteolytic
subunit ClpR4, putative; n=7; Magnoliophyta|Rep:
ATP-dependent Clp protease proteolytic subunit ClpR4,
putative - Arabidopsis thaliana (Mouse-ear cress)
Length = 305
Score = 127 bits (307), Expect = 3e-28
Identities = 68/157 (43%), Positives = 95/157 (60%), Gaps = 8/157 (5%)
Frame = +2
Query: 323 DIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPG--------GA 478
D+ S L + RI+ L + ++ LI+A+ L+LQ E +KP++LYINS G G
Sbjct: 105 DLASYLFKNRIVYLGMSLVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTKNGEKLGY 164
Query: 479 VTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQPSGGVR 658
T IYD M Y+ PPI T CVG A A+LLL AGA G R ALP+S IMI QP +
Sbjct: 165 DTEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLTAGAKGNRSALPSSTIMIKQPIARFQ 224
Query: 659 GQATDIQIQAEEILKLKAQINNLYVRHTGLXLEKVQS 769
GQATD++I +EI +K ++ LY +H G E++++
Sbjct: 225 GQATDVEIARKEIKHIKTEMVKLYSKHIGKSPEQIEA 261
>UniRef50_Q36863 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=1; Cyanophora paradoxa|Rep: ATP-dependent Clp
protease proteolytic subunit - Cyanophora paradoxa
Length = 194
Score = 126 bits (305), Expect = 5e-28
Identities = 63/146 (43%), Positives = 93/146 (63%)
Frame = +2
Query: 332 SRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIYDTM 511
S+LL+ RII ++D+I + IV QLL+L++E S K + L+INSPGG+VTAGL +YDT+
Sbjct: 22 SKLLQNRIILFSQTVDDEICNSIVGQLLYLENEDSTKDIRLFINSPGGSVTAGLSVYDTI 81
Query: 512 QYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQPSGGVRGQATDIQIQAE 691
Q ++ ++T C G A SM ++LLAAG R A +SRIMIHQP V + + IQ
Sbjct: 82 QNLSVDVSTICFGLAASMGAVLLAAGVENKRFAFASSRIMIHQPLSKVEAPWSHLDIQIR 141
Query: 692 EILKLKAQINNLYVRHTGLXLEKVQS 769
K +NN+ HT L+++++
Sbjct: 142 NGAYFKNLLNNILSFHTKQELKQIET 167
>UniRef50_A0LYF8 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=8; Bacteroidetes|Rep: ATP-dependent Clp
protease proteolytic subunit - Gramella forsetii (strain
KT0803)
Length = 186
Score = 126 bits (304), Expect = 6e-28
Identities = 64/160 (40%), Positives = 100/160 (62%)
Frame = +2
Query: 284 IVVEQTGRGERAYDIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYIN 463
++ +TG+ + D ++LL +R I + G ++D + ++ +L +L E + + L+IN
Sbjct: 3 LMKNKTGKIQDLID--NKLLEKRKIYMWGEVSDKTAKYVIDRLEYLDLEGDGE-IQLFIN 59
Query: 464 SPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQP 643
SPGG VT G IYDT+ + P++T C G A SM S+LL+AG G R P++++MIHQP
Sbjct: 60 SPGGYVTDGFAIYDTIMSLESPVSTICTGLAASMGSILLSAGKKGRRFIQPHAKVMIHQP 119
Query: 644 SGGVRGQATDIQIQAEEILKLKAQINNLYVRHTGLXLEKV 763
SGG RGQA++I+I A EILK K + + G ++KV
Sbjct: 120 SGGARGQASNIEIAANEILKTKHLSAEIIAENCGQSVDKV 159
>UniRef50_Q9FHJ7 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=11; cellular organisms|Rep: ATP-dependent Clp
protease proteolytic subunit - Arabidopsis thaliana
(Mouse-ear cress)
Length = 301
Score = 125 bits (302), Expect = 1e-27
Identities = 67/166 (40%), Positives = 101/166 (60%), Gaps = 9/166 (5%)
Frame = +2
Query: 293 EQTGRGERAYDIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPG 472
E RG + D+ LLRERI+ L I+D ++ I++QLL L ++ KK + L+INSPG
Sbjct: 70 ESAIRGAES-DVMGLLLRERIVFLGSSIDDFVADAIMSQLLLLDAKDPKKDIKLFINSPG 128
Query: 473 GAV---------TAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSR 625
G++ +A + IYD +Q + ++T +G A S AS++L AG G R A+PN+R
Sbjct: 129 GSLRLNVVIVWFSATMAIYDVVQLVRADVSTIALGIAASTASIILGAGTKGKRFAMPNTR 188
Query: 626 IMIHQPSGGVRGQATDIQIQAEEILKLKAQINNLYVRHTGLXLEKV 763
IMIHQP GG GQA D++IQA+E++ K + ++ T E+V
Sbjct: 189 IMIHQPLGGASGQAIDVEIQAKEVMHNKNNVTSIIAGCTSRSFEQV 234
>UniRef50_O48891 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=9; Magnoliophyta|Rep: ATP-dependent Clp
protease proteolytic subunit - Arabidopsis thaliana
(Mouse-ear cress)
Length = 271
Score = 125 bits (302), Expect = 1e-27
Identities = 60/148 (40%), Positives = 88/148 (59%)
Frame = +2
Query: 323 DIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIY 502
D+ S L R RII + PIN ++ +++QL+ L S K + +Y+N PGG+ + L IY
Sbjct: 96 DLSSVLFRNRIIFIGQPINAQVAQRVISQLVTLASIDDKSDILMYLNCPGGSTYSVLTIY 155
Query: 503 DTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQPSGGVRGQATDIQI 682
D M +I P + T G A S + LA G GMR+A+PN+R+MIHQP G G D++
Sbjct: 156 DCMSWIKPKVGTVAFGVAASQGAFFLAGGEKGMRYAMPNTRVMIHQPQTGCGGHVEDVRR 215
Query: 683 QAEEILKLKAQINNLYVRHTGLXLEKVQ 766
Q E ++ + +I+ +Y TG LEKVQ
Sbjct: 216 QVNEAIEARQKIDRMYAAFTGQPLEKVQ 243
>UniRef50_Q4UIN3 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=2; Theileria|Rep: ATP-dependent Clp protease
proteolytic subunit - Theileria annulata
Length = 215
Score = 124 bits (298), Expect = 3e-27
Identities = 65/159 (40%), Positives = 100/159 (62%), Gaps = 10/159 (6%)
Frame = +2
Query: 323 DIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIY 502
DI++RL RERI+ + P++D+ + ++A +L L +E+S+KP+ LYINSPGG + AGL +Y
Sbjct: 24 DIHNRLFRERILFVSQPLDDEYVNQLIAAILCLDNETSEKPITLYINSPGGNMHAGLSLY 83
Query: 503 DTM----------QYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQPSGG 652
DT+ Q++ I T VG S A+LLL +G PG R+ L +SR+++ QPSG
Sbjct: 84 DTLEVKTNKDKFNQHVRSEIVTINVGLCASTATLLLGSGTPGKRYGLQHSRVLLLQPSGL 143
Query: 653 VRGQATDIQIQAEEILKLKAQINNLYVRHTGLXLEKVQS 769
G A I+I+A+ IL++K + +Y T EK+ S
Sbjct: 144 AEGTAEQIKIEAQHILEIKKNLIEIYSNITKQPYEKIAS 182
>UniRef50_Q5FQT4 Cluster: ATP-dependent Clp protease proteolytic
subunit 2; n=19; Proteobacteria|Rep: ATP-dependent Clp
protease proteolytic subunit 2 - Gluconobacter oxydans
(Gluconobacter suboxydans)
Length = 223
Score = 122 bits (294), Expect = 1e-26
Identities = 61/149 (40%), Positives = 93/149 (62%), Gaps = 2/149 (1%)
Frame = +2
Query: 323 DIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIY 502
++ RL +R + + G IND I+ + +LL L +S KP+ +Y+NSPGG V +G I+
Sbjct: 44 ELEGRLFDQRKVLIFGGINDKIARDVTGRLLALAG-TSDKPIDVYVNSPGGHVESGDTIH 102
Query: 503 DTMQYITP--PIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQPSGGVRGQATDI 676
D ++++ PI G S +L+ AAG P R LPN+R ++HQP GGVRG ATDI
Sbjct: 103 DMIRFVDSIAPINMIGTGWVASAGALIYAAGRPERRVCLPNTRFLLHQPMGGVRGPATDI 162
Query: 677 QIQAEEILKLKAQINNLYVRHTGLXLEKV 763
I+A EI+K++ ++N ++ + TG EKV
Sbjct: 163 DIEAREIIKMRERLNRIFAKETGQTYEKV 191
>UniRef50_A4RST7 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=2; Ostreococcus|Rep: ATP-dependent Clp
protease proteolytic subunit - Ostreococcus lucimarinus
CCE9901
Length = 251
Score = 122 bits (293), Expect = 1e-26
Identities = 65/157 (41%), Positives = 97/157 (61%), Gaps = 8/157 (5%)
Frame = +2
Query: 323 DIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPG--------GA 478
D+ S + +ERI+ L + ++ LI+A+LL+LQ E KKP+ LYINS G G
Sbjct: 70 DLPSFIFKERIVYLGMTLVPSVTELILAELLYLQYEDKKKPIQLYINSTGSSKDGQKYGY 129
Query: 479 VTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQPSGGVR 658
T IYDT+QY++PP+ T VG A A++LLAAG+ G R ALP++ IM+ QP R
Sbjct: 130 DTEAFAIYDTIQYVSPPVHTIAVGTAWGEAAMLLAAGSRGNRAALPSASIMLKQPLSAFR 189
Query: 659 GQATDIQIQAEEILKLKAQINNLYVRHTGLXLEKVQS 769
GQA++++IQ +E+ K Q+ + + TG + V+S
Sbjct: 190 GQASELEIQRQEMRNTKRQMLEILAKTTGKDIATVES 226
>UniRef50_O84003 Cluster: ATP-dependent Clp protease proteolytic
subunit 2; n=3; Treponema|Rep: ATP-dependent Clp
protease proteolytic subunit 2 - Treponema pallidum
Length = 199
Score = 122 bits (293), Expect = 1e-26
Identities = 60/145 (41%), Positives = 89/145 (61%)
Frame = +2
Query: 329 YSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIYDT 508
+ + L R I L G I+ D++ IV QL L+S S KP+++Y++SPGG V AG I+D
Sbjct: 21 FQKFLETRQILLSGEISKDLAEGIVRQLFVLESLSVSKPIYMYVDSPGGDVDAGYAIFDV 80
Query: 509 MQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQPSGGVRGQATDIQIQA 688
++++ P+ T +G S L+L A R L NSR +IHQP G+RG ATDI+I A
Sbjct: 81 IRFVKTPVYTIGMGLVASAGVLVLLAAKKDCRFGLRNSRYLIHQPLSGMRGVATDIEIHA 140
Query: 689 EEILKLKAQINNLYVRHTGLXLEKV 763
E+ K ++++N L TG+ L+KV
Sbjct: 141 RELEKTRSKLNALIASETGVSLDKV 165
>UniRef50_Q300E3 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=4; Streptococcus|Rep: ATP-dependent Clp
protease proteolytic subunit - Streptococcus suis
89/1591
Length = 147
Score = 121 bits (292), Expect = 2e-26
Identities = 52/95 (54%), Positives = 74/95 (77%)
Frame = +2
Query: 275 MIPIVVEQTGRGERAYDIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHL 454
MIP+V+EQT RGER+YDIYSRLL++RII L GP+ D++++ I+AQLLFL ++ K ++L
Sbjct: 1 MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSIIAQLLFLDAQDPTKDIYL 60
Query: 455 YINSPGGAVTAGLGIYDTMQYITPPIATWCVGQAC 559
Y+N+PGG+V+AGL I DTM +I + T +G C
Sbjct: 61 YVNTPGGSVSAGLAIVDTMNFIKADVQTIVMGTGC 95
>UniRef50_Q00TD8 Cluster: Putative ATP-dependent Clp protease
proteolytic subunit; n=1; Ostreococcus tauri|Rep:
Putative ATP-dependent Clp protease proteolytic subunit
- Ostreococcus tauri
Length = 292
Score = 121 bits (291), Expect = 2e-26
Identities = 60/147 (40%), Positives = 94/147 (63%)
Frame = +2
Query: 323 DIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIY 502
DI++ L RERII + I++++ + +VA +LFL S KP++LYI S GG + + I
Sbjct: 114 DIWNCLYRERIIWIGQTIDEELGNQLVATMLFLDSVDRNKPMYLYITSEGGQIVPTMAIM 173
Query: 503 DTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQPSGGVRGQATDIQI 682
DTM+++ + T G A +M LLLA+G G R ALPN+ IM+H PSG RG A+D+Q
Sbjct: 174 DTMKHLKAEVGTVGFGSARAMGGLLLASGKKGKRAALPNTCIMLHHPSGVARGSASDVQN 233
Query: 683 QAEEILKLKAQINNLYVRHTGLXLEKV 763
+ +E++++++QIN TG ++ V
Sbjct: 234 EGKELMRIRSQINKKISDITGRPVDVV 260
>UniRef50_Q9PJW1 Cluster: ATP-dependent Clp protease proteolytic
subunit 1; n=9; Chlamydiales|Rep: ATP-dependent Clp
protease proteolytic subunit 1 - Chlamydia muridarum
Length = 192
Score = 120 bits (290), Expect = 3e-26
Identities = 65/153 (42%), Positives = 93/153 (60%), Gaps = 3/153 (1%)
Frame = +2
Query: 323 DIYSR-LLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGI 499
DI R LL R I P+ + ++ + +L +L+ S +P+ INSPGG+V AG +
Sbjct: 12 DIIDRKLLDSRRIFFSEPVTEKSAAEAIKKLWYLELTSPGQPIVFVINSPGGSVDAGFAV 71
Query: 500 YDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQPS--GGVRGQATD 673
+D ++ I+ P+ T G A SM S+L APG R A P++RIMIHQPS G + GQATD
Sbjct: 72 WDQIKMISSPVTTVVTGLAASMGSVLSLCAAPGRRFATPHARIMIHQPSIGGTITGQATD 131
Query: 674 IQIQAEEILKLKAQINNLYVRHTGLXLEKVQSS 772
+ I A EILK KA+I ++YV TG E ++ +
Sbjct: 132 LDIHAREILKTKARIIDVYVEATGQSREVIEKA 164
>UniRef50_P48254 Cluster: Putative ATP-dependent Clp protease
proteolytic subunit-like; n=1; Cyanophora paradoxa|Rep:
Putative ATP-dependent Clp protease proteolytic
subunit-like - Cyanophora paradoxa
Length = 199
Score = 120 bits (289), Expect = 4e-26
Identities = 66/142 (46%), Positives = 88/142 (61%), Gaps = 2/142 (1%)
Frame = +2
Query: 326 IYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIYD 505
I + LL ER+I L + S+ + LL+L+SE+S+KPV YINS G+YD
Sbjct: 22 INNALLNERVIFLCNYEDATDESIYIGMLLYLESENSQKPVSFYINSSITFPNLCFGLYD 81
Query: 506 TMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQP--SGGVRGQATDIQ 679
T+ I I T C+G A M+SL+LAAG G R ALPNSRIM+ +P GGV GQATD+
Sbjct: 82 TILQIKADIVTICLGLAGGMSSLILAAGTKGQRFALPNSRIMMQEPLIDGGVNGQATDLA 141
Query: 680 IQAEEILKLKAQINNLYVRHTG 745
I+A+E++ K + NLY TG
Sbjct: 142 IEAKELMDTKEILINLYHERTG 163
>UniRef50_A6DMN5 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=1; Lentisphaera araneosa HTCC2155|Rep:
ATP-dependent Clp protease proteolytic subunit -
Lentisphaera araneosa HTCC2155
Length = 196
Score = 119 bits (286), Expect = 9e-26
Identities = 58/142 (40%), Positives = 84/142 (59%)
Frame = +2
Query: 338 LLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIYDTMQY 517
+L R I + I+ ++S +++QL+ L S K+P+++YINS GG +G IYD +Q+
Sbjct: 23 MLDTRTIIIAEEISPELSRRVLSQLILLNKRSEKEPIYVYINSGGGCADSGFTIYDMLQF 82
Query: 518 ITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQPSGGVRGQATDIQIQAEEI 697
P+ T C G S A L+ A G +LPNSR M+HQPS GVRG A+DI+I AEEI
Sbjct: 83 FKAPVFTVCSGMCASAAILIFLAAKKGKNFSLPNSRFMLHQPSTGVRGTASDIEITAEEI 142
Query: 698 LKLKAQINNLYVRHTGLXLEKV 763
K + + N + LE+V
Sbjct: 143 NKTRVRYNQIVADVCNKPLEEV 164
>UniRef50_Q1PYX1 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=1; Candidatus Kuenenia stuttgartiensis|Rep:
ATP-dependent Clp protease proteolytic subunit -
Candidatus Kuenenia stuttgartiensis
Length = 208
Score = 118 bits (285), Expect = 1e-25
Identities = 55/149 (36%), Positives = 94/149 (63%)
Frame = +2
Query: 323 DIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIY 502
D+ +RLL+ R I + +N ++ ++ QLL L++++ + + ++INSPGG AG +Y
Sbjct: 30 DLIARLLKTRTIIVTDEVNKKMAERVITQLLLLEADNDED-IRVFINSPGGDADAGFAMY 88
Query: 503 DTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQPSGGVRGQATDIQI 682
D ++++ P I C G S A ++L R++LP+SRI+IHQPS G+ G A+D+QI
Sbjct: 89 DMLRFVKPKIKAICSGVVASAAVIILLGAKKEDRYSLPSSRILIHQPSTGIHGTASDLQI 148
Query: 683 QAEEILKLKAQINNLYVRHTGLXLEKVQS 769
+A EILK + ++N + TG + KV++
Sbjct: 149 EATEILKCREKMNRMISVETGQPIGKVET 177
>UniRef50_Q5Z0M5 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=1; Nocardia farcinica|Rep: ATP-dependent Clp
protease proteolytic subunit - Nocardia farcinica
Length = 201
Score = 118 bits (284), Expect = 2e-25
Identities = 55/143 (38%), Positives = 91/143 (63%)
Frame = +2
Query: 335 RLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIYDTMQ 514
+LL RI+ L GP++DD +L+ QLL L +E+ + P+ L+I+SPGG+V A L I D M+
Sbjct: 17 QLLSRRILVLDGPLDDDNGTLLATQLLTLAAENDEAPISLWIHSPGGSVPAMLAIRDVMR 76
Query: 515 YITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQPSGGVRGQATDIQIQAEE 694
+ ++T +G ACS LL+AG+ G R ALP++R+++HQ S G+ G A D+++QA++
Sbjct: 77 LVPCEVSTLALGLACSAGQFLLSAGSRGKRFALPHARVLMHQGSAGIGGTAVDVEVQADD 136
Query: 695 ILKLKAQINNLYVRHTGLXLEKV 763
+ + L TG +++
Sbjct: 137 LRHTVETVLGLIAADTGQPYDRI 159
>UniRef50_Q3LWG6 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=2; Bigelowiella natans|Rep: ATP-dependent Clp
protease proteolytic subunit - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 264
Score = 116 bits (279), Expect = 7e-25
Identities = 55/134 (41%), Positives = 83/134 (61%)
Frame = +2
Query: 368 GPINDDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIYDTMQYITPPIATWCV 547
G IND + + ++ +LFL + + + L INSPGG++ AGL +YD + + T +
Sbjct: 73 GEINDQLVNSLINSILFLSYKDNNSSIKLCINSPGGSIMAGLALYDAIVWTNKSTNTISL 132
Query: 548 GQACSMASLLLAAGAPGMRHALPNSRIMIHQPSGGVRGQATDIQIQAEEILKLKAQINNL 727
G A SM + LLA+G G+R + PN+RIMIHQP GG++G A DI+IQ +E+L + IN L
Sbjct: 133 GLAASMGAFLLASGTNGLRFSTPNTRIMIHQPIGGIQGNAVDIEIQVKELLYHRNNINYL 192
Query: 728 YVRHTGLXLEKVQS 769
+ T L ++S
Sbjct: 193 LSKFTDQSLSMIES 206
>UniRef50_A5KB90 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=3; Plasmodium|Rep: ATP-dependent Clp protease
proteolytic subunit - Plasmodium vivax
Length = 375
Score = 113 bits (271), Expect = 6e-24
Identities = 61/148 (41%), Positives = 84/148 (56%)
Frame = +2
Query: 323 DIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIY 502
D+ ++RII L IN + +++QLL+L S + + +YINSPGG++ GL I
Sbjct: 187 DVKLFFFKKRIIYLTEEINKKTADELISQLLYLDS-LNHDDIKIYINSPGGSINEGLAIL 245
Query: 503 DTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQPSGGVRGQATDIQI 682
D YI I T G SMAS++LA+G G R +LPN RIMIHQP G G DI+I
Sbjct: 246 DIFNYIQSDIQTISFGLVASMASVILASGKKGKRKSLPNCRIMIHQPLGNAFGHPQDIEI 305
Query: 683 QAEEILKLKAQINNLYVRHTGLXLEKVQ 766
Q +EIL LK + N T +E ++
Sbjct: 306 QTKEILYLKKLLYNYLSSFTNQTIETIE 333
>UniRef50_Q3LW65 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=1; Bigelowiella natans|Rep: ATP-dependent Clp
protease proteolytic subunit - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 207
Score = 110 bits (264), Expect = 4e-23
Identities = 57/119 (47%), Positives = 76/119 (63%)
Frame = +2
Query: 353 IICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIYDTMQYITPPI 532
I+ L G ++D+I+ LI + LF +S + K + L INSPGG+VTAGL I D + Y+
Sbjct: 45 ILSLYGGVDDNIADLIFKKALFTKSVDNNKELTLLINSPGGSVTAGLKIMDALNYVKVRN 104
Query: 533 ATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQPSGGVRGQATDIQIQAEEILKLK 709
T C+ A SM + LLA+G+ R AL NSRIMIHQP GG G + ++IQA EIL K
Sbjct: 105 NTVCLALAASMGAFLLASGSRNYRQALLNSRIMIHQPLGGAFGDSLGVEIQANEILYFK 163
>UniRef50_O97252 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=2; Plasmodium|Rep: ATP-dependent Clp protease
proteolytic subunit - Plasmodium falciparum (isolate
3D7)
Length = 370
Score = 110 bits (264), Expect = 4e-23
Identities = 59/148 (39%), Positives = 84/148 (56%)
Frame = +2
Query: 323 DIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIY 502
D+ ++RII L IN + +++QLL+L + + + +YINSPGG++ GL I
Sbjct: 186 DVKLFFFKKRIIYLTDEINKKTADELISQLLYLDN-INHNDIKIYINSPGGSINEGLAIL 244
Query: 503 DTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQPSGGVRGQATDIQI 682
D YI I T G SMAS++LA+G G R +LPN RIMIHQP G G DI+I
Sbjct: 245 DIFNYIKSDIQTISFGLVASMASVILASGKKGKRKSLPNCRIMIHQPLGNAFGHPQDIEI 304
Query: 683 QAEEILKLKAQINNLYVRHTGLXLEKVQ 766
Q +EIL LK + + T +E ++
Sbjct: 305 QTKEILYLKKLLYHYLSSFTNQTVETIE 332
>UniRef50_O51698 Cluster: ATP-dependent Clp protease proteolytic
subunit 2; n=3; Borrelia burgdorferi group|Rep:
ATP-dependent Clp protease proteolytic subunit 2 -
Borrelia burgdorferi (Lyme disease spirochete)
Length = 206
Score = 110 bits (264), Expect = 4e-23
Identities = 51/143 (35%), Positives = 87/143 (60%)
Frame = +2
Query: 338 LLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIYDTMQY 517
+L+ R I + G I D+S L ++L L++ KKP+ +YI+S GG + AG I++ +++
Sbjct: 28 VLKSRSIVIAGEITKDVSRLFQEKILLLEALDFKKPIFVYIDSEGGDIDAGFAIFNMIRF 87
Query: 518 ITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQPSGGVRGQATDIQIQAEEI 697
+ P + T VG S A+L+ A R +LP +R ++HQP G +G ATDI+I E+
Sbjct: 88 VKPKVFTVGVGLVASAAALIFLAAKLENRFSLPFARYLLHQPLSGFKGVATDIEIYTNEL 147
Query: 698 LKLKAQINNLYVRHTGLXLEKVQ 766
K+K ++NN+ + TG + K++
Sbjct: 148 NKVKKELNNIISKETGQKISKIE 170
>UniRef50_Q8Y7Y1 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=14; Bacteria|Rep: ATP-dependent Clp protease
proteolytic subunit - Listeria monocytogenes
Length = 190
Score = 109 bits (262), Expect = 7e-23
Identities = 54/143 (37%), Positives = 89/143 (62%)
Frame = +2
Query: 335 RLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIYDTMQ 514
+L+ R + + G IN +++ + QLL L+S S+ P+ ++INS GG V AG I+D ++
Sbjct: 17 KLIDTRTVLIYGEINQELAEDVSKQLLLLESISND-PITIFINSQGGHVEAGDTIHDMIK 75
Query: 515 YITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQPSGGVRGQATDIQIQAEE 694
+I P + G S + A R +LPN+R MIHQP+GGV+GQ+T+I+I+A+E
Sbjct: 76 FIKPTVKVVGTGWVASAGITIYLAAEKENRFSLPNTRYMIHQPAGGVQGQSTEIEIEAKE 135
Query: 695 ILKLKAQINNLYVRHTGLXLEKV 763
I++++ +IN L TG E++
Sbjct: 136 IIRMRERINRLIAEATGQSYEQI 158
>UniRef50_P26567 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=52; Streptophyta|Rep: ATP-dependent Clp
protease proteolytic subunit - Zea mays (Maize)
Length = 216
Score = 109 bits (262), Expect = 7e-23
Identities = 55/142 (38%), Positives = 85/142 (59%), Gaps = 1/142 (0%)
Frame = +2
Query: 323 DIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIY 502
D+Y+ + RER + L I +I++ I +++L E + L+INS GG + +G+ I+
Sbjct: 22 DLYNVMYRERTLFLGQEIRCEITNHITGLMVYLSIEDGNSDIFLFINSLGGWLISGMAIF 81
Query: 503 DTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQP-SGGVRGQATDIQ 679
DTMQ +TP I T C+G A SMAS +L G P R A P++RIM+HQP S R + +
Sbjct: 82 DTMQTVTPDIYTICLGIAASMASFILLGGEPTKRIAFPHARIMLHQPASAYYRARTPEFL 141
Query: 680 IQAEEILKLKAQINNLYVRHTG 745
++ EE+ K++ I +Y TG
Sbjct: 142 LEVEELHKVREMITRVYALRTG 163
>UniRef50_Q4UAC9 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=2; Theileria|Rep: ATP-dependent Clp protease
proteolytic subunit - Theileria annulata
Length = 271
Score = 108 bits (260), Expect = 1e-22
Identities = 67/181 (37%), Positives = 98/181 (54%), Gaps = 39/181 (21%)
Frame = +2
Query: 341 LRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAG---------- 490
++ RII L G +ND +S I++ +L + K P+ YINSPGG+VT+G
Sbjct: 64 IKNRIIFLSGELNDKVSFKIISSILRINENDPKLPIKFYINSPGGSVTSGNFITQFLHTL 123
Query: 491 ----LGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQPSG--- 649
L I+D ++ + P+ T +GQA SM + LLA+G GMR+A+PNSRIMIHQP G
Sbjct: 124 FFLGLAIFDILRSLKMPVETISLGQAASMGAFLLASGTKGMRYAMPNSRIMIHQPLGTLR 183
Query: 650 ----------------------GVRGQATDIQIQAEEILKLKAQINNLYVRHTGLXLEKV 763
G GQA+DI+IQA EIL+++ +N TG +E++
Sbjct: 184 CSVTVLAPAAPIITNPPKGLYRGAHGQASDIEIQANEILQIREILNTNLSNFTGKSVEEI 243
Query: 764 Q 766
+
Sbjct: 244 E 244
>UniRef50_Q50DZ1 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=1; Clostridium hathewayi|Rep: ATP-dependent
Clp protease proteolytic subunit - Clostridium hathewayi
Length = 139
Score = 107 bits (257), Expect = 3e-22
Identities = 46/84 (54%), Positives = 66/84 (78%)
Frame = +2
Query: 269 LGMIPIVVEQTGRGERAYDIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPV 448
+ ++P V+E T +GER+YD++SRLL++RII L +ND+ + L VAQ+LFL++E K +
Sbjct: 1 MSLVPNVIETTSKGERSYDLFSRLLKDRIIFLGEEVNDETARLAVAQMLFLEAEDPSKDI 60
Query: 449 HLYINSPGGAVTAGLGIYDTMQYI 520
YINSPGG++TAGL IYDTM+YI
Sbjct: 61 SFYINSPGGSITAGLAIYDTMRYI 84
>UniRef50_Q06R14 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=4; Jasminum|Rep: ATP-dependent Clp protease
proteolytic subunit - Jasminum leratii
Length = 261
Score = 105 bits (252), Expect = 1e-21
Identities = 58/141 (41%), Positives = 88/141 (62%), Gaps = 1/141 (0%)
Frame = +2
Query: 323 DIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIY 502
D+Y++L + I+ L I +++ I+A +L+L + + ++ +INSPGGAV GL IY
Sbjct: 57 DLYTKLYQLGILFLGEEIEFVVANEIIAAMLYLNMQDPLQRLYFFINSPGGAVHDGLAIY 116
Query: 503 DTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQPS-GGVRGQATDIQ 679
D M+YI I T C GQA SMAS+LLA+GA G R A P+S +M+HQP+ RG+ +
Sbjct: 117 DAMKYIDQEIHTICYGQAASMASVLLASGAKGHRGAYPHSMVMMHQPALAPTRGRLQRLV 176
Query: 680 IQAEEILKLKAQINNLYVRHT 742
+ + LK +I ++YV T
Sbjct: 177 RERNCLNILKERIIDIYVCET 197
>UniRef50_Q2SJI3 Cluster: ATP-dependent Clp protease, proteolytic
subunit ClpP; n=3; Bacteria|Rep: ATP-dependent Clp
protease, proteolytic subunit ClpP - Hahella chejuensis
(strain KCTC 2396)
Length = 194
Score = 104 bits (250), Expect = 2e-21
Identities = 56/157 (35%), Positives = 90/157 (57%)
Frame = +2
Query: 293 EQTGRGERAYDIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPG 472
E+ + +R + YS + R + + G +N +++ +L+ L +E S+ P+ + I+SPG
Sbjct: 9 EKGSKTDRIEEQYS--FKSRFVFIFGEVNHEMAQATCQRLIAL-AEDSEDPIRVLISSPG 65
Query: 473 GAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQPSGG 652
G V +G I+D +++I P+ T G S + + A R LPN+R MIHQP GG
Sbjct: 66 GHVESGDAIHDIIRFIRAPVITVGAGWVASAGTHIYLAAEKERRVCLPNTRFMIHQPGGG 125
Query: 653 VRGQATDIQIQAEEILKLKAQINNLYVRHTGLXLEKV 763
G A+DI IQA+EIL+ + +I ++ R TG EKV
Sbjct: 126 AGGPASDIAIQAKEILRARERIAHVVARQTGKPFEKV 162
>UniRef50_Q9MTJ8 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=1; Oenothera elata subsp. hookeri|Rep:
ATP-dependent Clp protease proteolytic subunit -
Oenothera hookeri (Hooker's evening primrose)
Length = 249
Score = 104 bits (249), Expect = 3e-21
Identities = 53/147 (36%), Positives = 84/147 (57%), Gaps = 2/147 (1%)
Frame = +2
Query: 323 DIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIY 502
D+Y+ L R R I L I+ ++++ I ++FL + + + ++ +INSPGG AGL IY
Sbjct: 28 DLYNVLYRTRSIFLGDAIHFEVANHIAGLMIFLTIQDATQNLYFFINSPGGLAVAGLLIY 87
Query: 503 DTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQPSGGV--RGQATDI 676
D MQY+ PP+ T +G SMAS LL G R PN R+MIHQP + Q+ ++
Sbjct: 88 DAMQYVAPPVYTLGLGVLASMASFLLVGGETSKRLMGPNGRVMIHQPESDYTHKDQSLEV 147
Query: 677 QIQAEEILKLKAQINNLYVRHTGLXLE 757
Q+ + E+ ++ + +Y+ T L E
Sbjct: 148 QLDSGEVEDIRKMVIRVYLERTRLPRE 174
>UniRef50_P54414 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=3; Alphaproteobacteria|Rep: ATP-dependent Clp
protease proteolytic subunit - Paracoccus denitrificans
Length = 199
Score = 103 bits (246), Expect = 6e-21
Identities = 48/137 (35%), Positives = 85/137 (62%)
Frame = +2
Query: 356 ICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIYDTMQYITPPIA 535
+ + GPI D ++ VA LL L +E S +P+++ I+SPGG V +G I+D +++I P +
Sbjct: 33 VIVAGPITDKLAQRTVAHLLAL-AEDSDEPINMLISSPGGHVESGDMIHDVIKFIRPTVR 91
Query: 536 TWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQPSGGVRGQATDIQIQAEEILKLKAQ 715
T + S +L+ R+ LPN+R +IHQPS G+ G +TD+ IQAE++ ++ +
Sbjct: 92 TIGLAWVASAGALIFVGADKENRYCLPNTRFLIHQPSVGIGGTSTDMMIQAEQVRLMRDR 151
Query: 716 INNLYVRHTGLXLEKVQ 766
+N ++ TG +E+++
Sbjct: 152 LNQIFAEATGQPVERIE 168
>UniRef50_Q2WGG1 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=1; Selaginella uncinata|Rep: ATP-dependent
Clp protease proteolytic subunit - Selaginella uncinata
(Blue spikemoss) (Peacock spikemoss)
Length = 206
Score = 98.7 bits (235), Expect = 1e-19
Identities = 55/142 (38%), Positives = 80/142 (56%), Gaps = 1/142 (0%)
Frame = +2
Query: 323 DIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIY 502
D ++R RER+ ++D+ ++ + E+ + H Y N PGGAV+AG+ +Y
Sbjct: 22 DTHNRPYRERLPSSGQHMDDETANQPIRITTHPNGENRSQDTHSYTNPPGGAVSAGISVY 81
Query: 503 DTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQP-SGGVRGQATDIQ 679
DTMQ P + T VG A SM + G R ALP++R+MIHQP S GQA +
Sbjct: 82 DTMQSAVPDVHTIRVGLAASMGPSISTGGEITRRMALPHARVMIHQPASSFYEGQAGERL 141
Query: 680 IQAEEILKLKAQINNLYVRHTG 745
++AEEILKL+ I ++ R TG
Sbjct: 142 MEAEEILKLRDCITKIHARKTG 163
>UniRef50_A5K0N3 Cluster: ATP-dependent Clp protease proteolytic
subunit, putative; n=6; Plasmodium|Rep: ATP-dependent
Clp protease proteolytic subunit, putative - Plasmodium
vivax
Length = 1104
Score = 98.7 bits (235), Expect = 1e-19
Identities = 55/156 (35%), Positives = 89/156 (57%), Gaps = 11/156 (7%)
Frame = +2
Query: 311 ERAYDIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPG------ 472
+ I S LL +RII L P+ IS I++QLL+L+ ES +KP+HLYINS G
Sbjct: 60 QHGISIPSMLLSKRIIFLSSPVYPHISEQIISQLLYLEYESKRKPIHLYINSTGDLENNK 119
Query: 473 ----GAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQ 640
+T + I D + YI+ + T+C+G+A ++ +L ++G G R +L NS ++Q
Sbjct: 120 IINLNGMTDVISIIDVIDYISSDVYTYCLGKAYGISCILASSGKKGFRFSLKNSSFCLNQ 179
Query: 641 PSGGVR-GQATDIQIQAEEILKLKAQINNLYVRHTG 745
+ QAT+I+IQ +EI+ K ++ + +TG
Sbjct: 180 SYSVIPFNQATNIEIQNKEIMNTKRKVVEIIANNTG 215
>UniRef50_Q06SH9 Cluster: Proteolytic subunit 2 of clp protease;
n=1; Stigeoclonium helveticum|Rep: Proteolytic subunit 2
of clp protease - Stigeoclonium helveticum (Green alga)
Length = 518
Score = 97.1 bits (231), Expect = 4e-19
Identities = 43/110 (39%), Positives = 73/110 (66%), Gaps = 3/110 (2%)
Frame = +2
Query: 410 LLFLQSES---SKKPVHLYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLL 580
LLF++++ + V ++INS GG+V++G+ IYD +Q++ T C+G A S +S++L
Sbjct: 324 LLFMETQERLQEQSRVFVFINSTGGSVSSGITIYDALQFVKTGAVTVCLGMAFSASSMVL 383
Query: 581 AAGAPGMRHALPNSRIMIHQPSGGVRGQATDIQIQAEEILKLKAQINNLY 730
A G G R+ + +MIHQP GG+ GQA+D+ + A EIL+++ Q+ +Y
Sbjct: 384 AGGNIGHRYVAEGAHVMIHQPEGGITGQASDVLLDAYEILRIRRQVATIY 433
>UniRef50_Q06FP3 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=1; Pelargonium x hortorum|Rep: ATP-dependent
Clp protease proteolytic subunit - Pelargonium hortorum
(Common geranium)
Length = 219
Score = 96.7 bits (230), Expect = 6e-19
Identities = 48/141 (34%), Positives = 82/141 (58%), Gaps = 1/141 (0%)
Frame = +2
Query: 323 DIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIY 502
D+Y+RL R+R + L + +++++ IV ++ L E LYIN GG + GL +Y
Sbjct: 37 DLYNRLYRQRWLFLGKDLEEEVANNIVGLMIHLNIEDPFWTQTLYINCLGGLIIPGLALY 96
Query: 503 DTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQP-SGGVRGQATDIQ 679
DT+ ++ P + T C+G A SMAS++L G R A PN+R+MIHQP + + +D+
Sbjct: 97 DTIGFVEPDVKTICLGIAASMASVVLVGGTVTERCAFPNARVMIHQPRAKEFDDRFSDLN 156
Query: 680 IQAEEILKLKAQINNLYVRHT 742
++ L+L+ + +Y+ T
Sbjct: 157 LEGHLFLQLRNCVTQIYIHRT 177
>UniRef50_UPI000050FD0C Cluster: COG0740: Protease subunit of
ATP-dependent Clp proteases; n=1; Brevibacterium linens
BL2|Rep: COG0740: Protease subunit of ATP-dependent Clp
proteases - Brevibacterium linens BL2
Length = 219
Score = 94.7 bits (225), Expect = 2e-18
Identities = 46/138 (33%), Positives = 77/138 (55%)
Frame = +2
Query: 350 RIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIYDTMQYITPP 529
R + G + D+ I+++L+ L +E S +HL+INSPGG+V I D ++ +
Sbjct: 44 RSVVFNGELRDENGMEIISRLILLSAEDSHSDIHLWINSPGGSVPMMHAIADVIETLPND 103
Query: 530 IATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQPSGGVRGQATDIQIQAEEILKLK 709
+ T G A S +L G PG R ALP++RI++HQ S G+ G A DI++Q+ ++ ++
Sbjct: 104 VVTVAFGWAASAGQFVLMMGTPGKRLALPHARILLHQGSSGIGGAAADIELQSGDLRTVR 163
Query: 710 AQINNLYVRHTGLXLEKV 763
+ + TG E+V
Sbjct: 164 DTVLHRIAEATGKTYERV 181
>UniRef50_A4S2U0 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=2; Ostreococcus|Rep: ATP-dependent Clp
protease proteolytic subunit - Ostreococcus lucimarinus
CCE9901
Length = 210
Score = 93.5 bits (222), Expect = 5e-18
Identities = 50/165 (30%), Positives = 98/165 (59%), Gaps = 1/165 (0%)
Frame = +2
Query: 278 IPIVVEQTGRGERAYDIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLY 457
+P++V GRG D++ L R+RI+ L I++ +++ A+LL L+SE + + ++
Sbjct: 26 VPVMVPD-GRGG-GEDVFGALARDRIVFLGTRIDEQVAAETCARLLQLESEDPEGEIRVW 83
Query: 458 INSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIH 637
+N G I DTM+Y++ P++T +G +L+AAG G R+ + ++RI++
Sbjct: 84 VNCVAGTQYCVTAILDTMEYVSCPVSTVALGCVAGPPVMLVAAGDKGKRYGMSSARIVLS 143
Query: 638 QPSGGVRGQATDIQIQAEEILK-LKAQINNLYVRHTGLXLEKVQS 769
QP GG+ G + +++IQA E+ + KAQ+ ++TG +++++
Sbjct: 144 QPLGGLAGTSIEVKIQATELNRNAKAQV-GFIAKYTGRDADELEA 187
>UniRef50_Q67XY5 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=8; Magnoliophyta|Rep: ATP-dependent Clp
protease proteolytic subunit - Arabidopsis thaliana
(Mouse-ear cress)
Length = 330
Score = 92.3 bits (219), Expect = 1e-17
Identities = 55/159 (34%), Positives = 91/159 (57%), Gaps = 12/159 (7%)
Frame = +2
Query: 323 DIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPG---------G 475
D+ S LL RI+ + P+ ++ L+VA+L++LQ K+P+++YINS G G
Sbjct: 121 DLPSMLLDGRIVYIGMPLVPAVTELVVAELMYLQWLDPKEPIYIYINSTGTTRDDGETVG 180
Query: 476 AVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQ---PS 646
+ G IYD++ + + T CVG A A LLL+AG G R +P+++ MI + PS
Sbjct: 181 MESEGFAIYDSLMQLKNEVHTVCVGAAIGQACLLLSAGTKGKRFMMPHAKAMIQRPRVPS 240
Query: 647 GGVRGQATDIQIQAEEILKLKAQINNLYVRHTGLXLEKV 763
G+ A+D+ I+A+E++ + + L +HTG +E V
Sbjct: 241 SGLM-PASDVLIRAKEVITNRDILVELLSKHTGNSVETV 278
>UniRef50_A5BHP1 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=3; cellular organisms|Rep: ATP-dependent Clp
protease proteolytic subunit - Vitis vinifera (Grape)
Length = 429
Score = 89.4 bits (212), Expect = 9e-17
Identities = 41/90 (45%), Positives = 62/90 (68%)
Frame = +2
Query: 311 ERAYDIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAG 490
ER + S+L + RII G ++DD++++IVAQLL+L + K + +Y+NSPGG+VTAG
Sbjct: 98 ERFQSVVSQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAVDPDKDIVMYVNSPGGSVTAG 157
Query: 491 LGIYDTMQYITPPIATWCVGQACSMASLLL 580
+ I+DTM++I P ++T CVG A L L
Sbjct: 158 MAIFDTMRHIRPDVSTVCVGLAARTVRLRL 187
Score = 82.2 bits (194), Expect = 1e-14
Identities = 41/75 (54%), Positives = 49/75 (65%)
Frame = +2
Query: 539 WCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQPSGGVRGQATDIQIQAEEILKLKAQI 718
W VG SM + LL+ G G R++LPNSRIMIHQP GG +G TDI IQA E+L KA +
Sbjct: 317 WTVG---SMGAFLLSCGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANL 373
Query: 719 NNLYVRHTGLXLEKV 763
N HTG LEK+
Sbjct: 374 NGYLSYHTGQSLEKI 388
>UniRef50_P42380 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=2; Chlorophyceae|Rep: ATP-dependent Clp
protease proteolytic subunit - Chlamydomonas reinhardtii
Length = 524
Score = 89.4 bits (212), Expect = 9e-17
Identities = 45/104 (43%), Positives = 64/104 (61%)
Frame = +2
Query: 419 LQSESSKKPVHLYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPG 598
+Q E SKK V + INS GG+V G+ ++D +Q+I T +G A S ASL LA G G
Sbjct: 341 IQEEESKK-VFMIINSFGGSVGNGITVHDALQFIKAGSLTLALGVAASAASLALAGGTIG 399
Query: 599 MRHALPNSRIMIHQPSGGVRGQATDIQIQAEEILKLKAQINNLY 730
R+ MIHQP GG+ GQA+DI I ++EI+K++ + +Y
Sbjct: 400 ERYVTEGCHTMIHQPEGGLNGQASDIWIDSQEIMKIRLDVAEIY 443
>UniRef50_A4RSQ9 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=2; Ostreococcus|Rep: ATP-dependent Clp
protease proteolytic subunit - Ostreococcus lucimarinus
CCE9901
Length = 308
Score = 89.0 bits (211), Expect = 1e-16
Identities = 59/159 (37%), Positives = 87/159 (54%), Gaps = 12/159 (7%)
Frame = +2
Query: 323 DIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPG---------G 475
D+ S LL RI+ + P+ ++ LIV++LL+LQ KKP ++YINS G G
Sbjct: 99 DLPSLLLDSRIVYIGMPLVPAVTELIVSELLYLQYTDQKKPCYIYINSTGCTRADGEVVG 158
Query: 476 AVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQ---PS 646
T I+DTM+YI I T G A A +LL+AG G R+ P++ M+HQ PS
Sbjct: 159 FETEATAIFDTMKYIGNEIYTVGTGVAIGQACMLLSAGDKGKRYMTPHATAMLHQPRVPS 218
Query: 647 GGVRGQATDIQIQAEEILKLKAQINNLYVRHTGLXLEKV 763
G R QAT++ I+ E L K + ++ + TG + K+
Sbjct: 219 TGER-QATELNIKWRETLAQKKSLLDILSQTTGHSVAKL 256
>UniRef50_A4E7Q8 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=1; Collinsella aerofaciens ATCC 25986|Rep:
ATP-dependent Clp protease proteolytic subunit -
Collinsella aerofaciens ATCC 25986
Length = 205
Score = 84.2 bits (199), Expect = 3e-15
Identities = 46/165 (27%), Positives = 86/165 (52%), Gaps = 2/165 (1%)
Frame = +2
Query: 281 PIVVEQTGRGERAYDIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYI 460
P+ + ++ RG IY +L R + +MG I ++ + Q+ L + +P+ +++
Sbjct: 11 PLTMRESARGITLTSIYDEMLARRELSVMGNIETPMAHDLCQQIRLLDATDPSRPITIFV 70
Query: 461 NSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQ 640
S GG+V +GL IYD M+ + PI T C+ A SM +++ G R A P++ +MIH
Sbjct: 71 ASAGGSVRSGLAIYDAMRLASCPIRTVCLEFAASMGAVIF-MGGDDCRMA-PHAELMIHD 128
Query: 641 P--SGGVRGQATDIQIQAEEILKLKAQINNLYVRHTGLXLEKVQS 769
P G G A +Q + +++ + + + +GL +++QS
Sbjct: 129 PLIPQGAGGSALALQETSRRLMQTRKTLTQILSDRSGLTPKRIQS 173
>UniRef50_Q5IX12 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=1; Prototheca wickerhamii|Rep: ATP-dependent
Clp protease proteolytic subunit - Prototheca
wickerhamii
Length = 251
Score = 78.6 bits (185), Expect = 2e-13
Identities = 47/114 (41%), Positives = 64/114 (56%), Gaps = 9/114 (7%)
Frame = +2
Query: 308 GERAYDIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPG----- 472
G D+ S LL RI + P+ ++ L++++LL+L S KPV++YINS G
Sbjct: 138 GRAPPDLPSLLLDGRICYIGMPLVPAVTELVISELLWLNYSSPTKPVYVYINSTGSQREG 197
Query: 473 ----GAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNS 622
G T I DTM YI P I T +GQAC A++LLA+G G R ALP+S
Sbjct: 198 GESVGFETEATAIMDTMAYIRPDIYTLVIGQACGNAAMLLASGKKGHRFALPHS 251
>UniRef50_A4S2Q5 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=2; Ostreococcus|Rep: ATP-dependent Clp
protease proteolytic subunit - Ostreococcus lucimarinus
CCE9901
Length = 381
Score = 78.6 bits (185), Expect = 2e-13
Identities = 52/134 (38%), Positives = 73/134 (54%), Gaps = 10/134 (7%)
Frame = +2
Query: 323 DIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPG---------G 475
D+ S LL RI + + ++ L+VA+LL+L E ++KP ++YINS G G
Sbjct: 149 DLPSLLLNARICYIGMSLVPAVTELVVAELLYLGYEQAEKPCYVYINSGGSLNEKGEVVG 208
Query: 476 AVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQPSGGV 655
I DTM+YI P I T VG+ ASL+LAAG G RHALP+ +I P
Sbjct: 209 MDNEAYAILDTMRYIRPKIHTVAVGKCHGNASLILAAGDKGCRHALPHVQISTQPPKLNR 268
Query: 656 RGQAT-DIQIQAEE 694
+T ++QI+A E
Sbjct: 269 TFDSTQNVQIRANE 282
>UniRef50_Q6C1Y5 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=1; Yarrowia lipolytica|Rep: ATP-dependent Clp
protease proteolytic subunit - Yarrowia lipolytica
(Candida lipolytica)
Length = 157
Score = 76.6 bits (180), Expect = 6e-13
Identities = 37/83 (44%), Positives = 50/83 (60%)
Frame = +2
Query: 509 MQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQPSGGVRGQATDIQIQA 688
M YI P+ T C+GQA SMASLLL GAPG R PNS IM H+P GG+ G + +++
Sbjct: 1 MNYIRSPVHTVCLGQAASMASLLLTCGAPGNRIMTPNSTIMTHEPLGGIVGSSKLVELHT 60
Query: 689 EEILKLKAQINNLYVRHTGLXLE 757
+ +++ +I LY L LE
Sbjct: 61 FHLQRIRTRIIQLYYDSMKLGLE 83
>UniRef50_Q4UBQ0 Cluster: ATP-dependent Clp protease proteolytic
subunit, putative; n=1; Theileria annulata|Rep:
ATP-dependent Clp protease proteolytic subunit, putative
- Theileria annulata
Length = 261
Score = 75.4 bits (177), Expect = 1e-12
Identities = 46/139 (33%), Positives = 75/139 (53%), Gaps = 10/139 (7%)
Frame = +2
Query: 377 NDDISSLIVAQLLFLQSESSKKPVHLYINSPG------GAVTA---GLGIYDTMQYITPP 529
N ++ L+++QLL+L +S KP+ +YINS G T+ L I D M Y+
Sbjct: 94 NSGVAHLVISQLLYLDYDSQDKPIKIYINSDNERSNEDGISTSEIDALNIVDVMNYLKNE 153
Query: 530 IATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQ-PSGGVRGQATDIQIQAEEILKL 706
+ T +G+A A+L+LA+G PG R+ LP S ++ Q P+ QA DI I + EILK
Sbjct: 154 VITINLGKAYGPAALILASGTPGKRYVLPRSYTLLRQSPTTLSFRQAEDIAIYSREILKA 213
Query: 707 KAQINNLYVRHTGLXLEKV 763
+ + ++ + E++
Sbjct: 214 RRSVIKVFSKACNKSEEEI 232
>UniRef50_Q9XJ35 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=1; Arabidopsis thaliana|Rep: ATP-dependent
Clp protease proteolytic subunit - Arabidopsis thaliana
(Mouse-ear cress)
Length = 387
Score = 72.9 bits (171), Expect = 8e-12
Identities = 51/157 (32%), Positives = 77/157 (49%), Gaps = 10/157 (6%)
Frame = +2
Query: 323 DIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPG---------G 475
D+ S LL RI L PI ++ L+VAQ ++L ++ KP++LYINSPG G
Sbjct: 171 DLPSLLLDARICYLGMPIVPAVTELLVAQFMWLDYDNPTKPIYLYINSPGTQNEKMETVG 230
Query: 476 AVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQPS-GG 652
+ T I DT+ Y + T G A A++LL+ G G R P+S ++ P
Sbjct: 231 SETEAYAIADTISYCKSDVYTINCGMAFGQAAMLLSLGKKGYRAVQPHSSTKLYLPKVNR 290
Query: 653 VRGQATDIQIQAEEILKLKAQINNLYVRHTGLXLEKV 763
G A D+ I+A+E+ L + TG E++
Sbjct: 291 SSGAAIDMWIKAKELDANTEYYIELLAKGTGKSKEQI 327
>UniRef50_A7QL58 Cluster: Chromosome chr3 scaffold_117, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr3 scaffold_117, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 388
Score = 71.7 bits (168), Expect = 2e-11
Identities = 51/158 (32%), Positives = 78/158 (49%), Gaps = 10/158 (6%)
Frame = +2
Query: 323 DIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPG---------G 475
D+ S LL RI L PI ++ L+VAQ ++L ++ KP++LYINS G G
Sbjct: 169 DLPSLLLDARICYLGMPIVPAVAELLVAQFMWLDFDNPSKPIYLYINSTGTQNEKMETVG 228
Query: 476 AVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQPSGGV 655
+ T I D+M Y + T G A A++LL+ GA G R PN+ ++ P
Sbjct: 229 SETEAYAIADSMAYCKSDVYTVNCGTAYGQAAMLLSVGAKGYRGLQPNASTKLYLPKVNR 288
Query: 656 RGQAT-DIQIQAEEILKLKAQINNLYVRHTGLXLEKVQ 766
AT D+ I+A+E+ L + TG E+++
Sbjct: 289 SSGATIDMWIKAKELDANSEYYIELLAKGTGKTKEEIK 326
>UniRef50_Q8ZQG9 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=17; root|Rep: ATP-dependent Clp protease
proteolytic subunit - Salmonella typhimurium
Length = 728
Score = 64.1 bits (149), Expect = 4e-09
Identities = 34/100 (34%), Positives = 60/100 (60%)
Frame = +2
Query: 446 VHLYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSR 625
++L+I+SPGG++ GL IY+ ++ + G ACSMAS++ G P + N+
Sbjct: 94 INLHIHSPGGSIFDGLAIYNLLKNHPARKVVYVDGVACSMASVIAMVGDPVIMP--ENAM 151
Query: 626 IMIHQPSGGVRGQATDIQIQAEEILKLKAQINNLYVRHTG 745
+MIH+P G G+++DI+ A+ + K+++ I +Y TG
Sbjct: 152 MMIHRPRGIAGGESSDIRDYADLLDKMESVIIPIYAEKTG 191
>UniRef50_Q9PFZ5 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=4; Xylella fastidiosa|Rep: ATP-dependent Clp
protease proteolytic subunit - Xylella fastidiosa
Length = 752
Score = 60.5 bits (140), Expect = 5e-08
Identities = 45/154 (29%), Positives = 70/154 (45%), Gaps = 2/154 (1%)
Frame = +2
Query: 275 MIPIVVEQTGRGERAYDIYSRLLRERIICLMGPINDDI--SSLIVAQLLFLQSESSKKPV 448
M P + R +++ ++ + L GPI D + A ++ S + +
Sbjct: 1 MTPAPMPPQARPPSVVALHASNPKQAELLLYGPIGDLFWEDGVTAASVIAQLSTVTAPLI 60
Query: 449 HLYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRI 628
H+ INS GG V+ GL IY+ + I G A S+ASL+ AG R PNS +
Sbjct: 61 HVRINSNGGVVSDGLAIYNALTAHPATIHVTIDGVAASIASLIAQAGT--TRRVYPNSLM 118
Query: 629 MIHQPSGGVRGQATDIQIQAEEILKLKAQINNLY 730
MIH P G G A D++ A + + A ++ Y
Sbjct: 119 MIHGPQTGGWGFAEDLRDTAAMLDTMAAAMHTAY 152
>UniRef50_P42379 Cluster: ATP-dependent Clp protease proteolytic
subunit (EC 3.4.21.92) (Endopeptidase Clp) [Contains:
Ceu clpP intein (Insertion IS2)]; n=1; Chlamydomonas
eugametos|Rep: ATP-dependent Clp protease proteolytic
subunit (EC 3.4.21.92) (Endopeptidase Clp) [Contains:
Ceu clpP intein (Insertion IS2)] - Chlamydomonas
eugametos
Length = 1010
Score = 60.5 bits (140), Expect = 5e-08
Identities = 33/74 (44%), Positives = 43/74 (58%)
Frame = +2
Query: 422 QSESSKKPVHLYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGM 601
Q E SKK V + INS GG+V G+ ++D +Q+I T +G A S ASL LA G G
Sbjct: 374 QEEESKK-VFVIINSFGGSVGNGITVHDALQFIKAGSLTLALGVAASAASLALAGGTIGE 432
Query: 602 RHALPNSRIMIHQP 643
R+ +MIHQP
Sbjct: 433 RYVTEGCHVMIHQP 446
>UniRef50_Q4JLM3 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=3; Lactobacillus|Rep: ATP-dependent Clp
protease proteolytic subunit - Lactobacillus reuteri
Length = 223
Score = 60.1 bits (139), Expect = 6e-08
Identities = 41/132 (31%), Positives = 61/132 (46%)
Frame = +2
Query: 374 INDDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQ 553
++DD+S + L S+ P+ L++NSPGG TA IY + + G
Sbjct: 28 VHDDVSPQVFQDEL----NESQDPIDLWLNSPGGDCTAASQIYTMLMNYPNEVNVKISGI 83
Query: 554 ACSMASLLLAAGAPGMRHALPNSRIMIHQPSGGVRGQATDIQIQAEEILKLKAQINNLYV 733
A S AS++ AG P + +MIH P V GQ D+ A+ + + K I N Y
Sbjct: 84 AASAASVIAMAGT--TVSMAPAAMLMIHNPLTIVGGQERDLDHAAQMLAETKESIINAYE 141
Query: 734 RHTGLXLEKVQS 769
T L EK+ +
Sbjct: 142 LKTNLPREKIST 153
>UniRef50_A1K6N2 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=2; Betaproteobacteria|Rep: ATP-dependent Clp
protease proteolytic subunit - Azoarcus sp. (strain
BH72)
Length = 625
Score = 60.1 bits (139), Expect = 6e-08
Identities = 38/106 (35%), Positives = 59/106 (55%)
Frame = +2
Query: 362 LMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIYDTMQYITPPIATW 541
++G I D + I+A+L + PV + INS GG+V AG+ IY+ ++ P +
Sbjct: 6 IIGEITDVTAREILAELAL----AGDSPVVVRINSQGGSVQAGVTIYEALKAHRPSVTVE 61
Query: 542 CVGQACSMASLLLAAGAPGMRHALPNSRIMIHQPSGGVRGQATDIQ 679
VG A S ASL+ AG P +R A P S +M+H P G A++++
Sbjct: 62 IVGWALSAASLIAMAGRP-VRMA-PTSLLMVHAPWTSATGNASELR 105
>UniRef50_Q3EL78 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=1; Bacillus thuringiensis serovar israelensis
ATCC 35646|Rep: ATP-dependent Clp protease proteolytic
subunit - Bacillus thuringiensis serovar israelensis
ATCC 35646
Length = 244
Score = 59.7 bits (138), Expect = 8e-08
Identities = 38/113 (33%), Positives = 65/113 (57%), Gaps = 3/113 (2%)
Frame = +2
Query: 437 KKPVHLYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALP 616
K +++Y+NS GG+V AGL IY+ ++ + G A S+AS++ AG R +P
Sbjct: 62 KSNLNIYVNSGGGSVFAGLAIYNMLKRNKAQKTVYVDGVAASIASVIALAGD---RVVVP 118
Query: 617 -NSRIMIHQPSGGVRGQATDIQIQAEEILKLKAQINNLYVRH--TGLXLEKVQ 766
N+ +M+H+P RG A ++ AE++ L+A I N+Y + G+ +E +Q
Sbjct: 119 SNAFLMVHKPWTVSRGNANVLRKMAEDLDNLEAGIMNVYKENLKEGIEMEVIQ 171
>UniRef50_A1WEU3 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=1; Verminephrobacter eiseniae EF01-2|Rep:
ATP-dependent Clp protease proteolytic subunit -
Verminephrobacter eiseniae (strain EF01-2)
Length = 229
Score = 58.8 bits (136), Expect = 1e-07
Identities = 30/99 (30%), Positives = 56/99 (56%)
Frame = +2
Query: 341 LRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIYDTMQYI 520
+ R + ++G I+ ++ V QL L S + P++++I+SPGG V +G I+D +++I
Sbjct: 24 INARKVFIIGTIDHKMAKEAVQQLHILASINDD-PIYVFISSPGGHVESGDLIFDAIRFI 82
Query: 521 TPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIH 637
TP + G S +L+ A R++LPN+ ++H
Sbjct: 83 TPKVIVVSSGWVASAGALIYVAADKENRYSLPNTHFLLH 121
>UniRef50_A3X5R0 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=1; Roseobacter sp. MED193|Rep: ATP-dependent
Clp protease proteolytic subunit - Roseobacter sp.
MED193
Length = 326
Score = 58.4 bits (135), Expect = 2e-07
Identities = 35/100 (35%), Positives = 52/100 (52%)
Frame = +2
Query: 446 VHLYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSR 625
+ L +NSPGG+V + IY+ ++ I W G A S AS + AG + N+
Sbjct: 45 IDLRLNSPGGSVFDAVAIYNALKRHAGEITVWIDGIAASAASYIAMAGDAIVMP--ENAF 102
Query: 626 IMIHQPSGGVRGQATDIQIQAEEILKLKAQINNLYVRHTG 745
+MIH PSG V G A D++ AE + K+K + Y +G
Sbjct: 103 LMIHDPSGLVMGTAEDMRATAEALDKVKGSLIQGYAGKSG 142
>UniRef50_Q40943 Cluster: ATP-dependent clp protease proteolytic
subunit homolog; n=1; Bigelowiella natans|Rep:
ATP-dependent clp protease proteolytic subunit homolog -
Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 226
Score = 58.0 bits (134), Expect = 2e-07
Identities = 31/104 (29%), Positives = 55/104 (52%)
Frame = +2
Query: 323 DIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIY 502
+I ++ + + I + G +ND +S I++ LLF ++ ++ + L +NS G +T + I
Sbjct: 45 EIAQKMSKTKSIFIYGYLNDSLSIQIISNLLFFNGKN-EQGISLILNSNGSNITDSININ 103
Query: 503 DTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMI 634
+ M YI P + T +G L+LA G R PN++I I
Sbjct: 104 ECMNYIYPEVYTVGIGNIMDSIILILANGKKDSRAIFPNAKISI 147
>UniRef50_Q7P8G2 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=1; Fusobacterium nucleatum subsp. vincentii
ATCC 49256|Rep: ATP-dependent Clp protease proteolytic
subunit - Fusobacterium nucleatum subsp. vincentii ATCC
49256
Length = 344
Score = 57.2 bits (132), Expect = 4e-07
Identities = 35/108 (32%), Positives = 56/108 (51%)
Frame = +2
Query: 446 VHLYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSR 625
++LYINSPGG+VT G IY ++ + GQ S+AS++ AG P +
Sbjct: 51 INLYINSPGGSVTEGCAIYSALKRHKAVKNVYIDGQCSSIASVIAMAG--DKIAMSPVAT 108
Query: 626 IMIHQPSGGVRGQATDIQIQAEEILKLKAQINNLYVRHTGLXLEKVQS 769
+MIH P + G A +++ A + +K I N YV + L E++ +
Sbjct: 109 MMIHNPITALAGDAIELRKTAAILDIMKETIINAYVTKSHLSREEISA 156
>UniRef50_A0VK63 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=1; Delftia acidovorans SPH-1|Rep:
ATP-dependent Clp protease proteolytic subunit - Delftia
acidovorans SPH-1
Length = 345
Score = 56.8 bits (131), Expect = 6e-07
Identities = 33/104 (31%), Positives = 57/104 (54%), Gaps = 3/104 (2%)
Frame = +2
Query: 446 VHLYINSPGGAVTAGLGIYDTMQYITPP---IATWCVGQACSMASLLLAAGAPGMRHALP 616
+ + +N+PGG V AGLGI++ ++ + T +G A S+ S+LL AG R
Sbjct: 45 IDVELNTPGGDVFAGLGIFNMLRAHAAKGFQVTTRVMGVAASIGSVLLLAG--DKREMPK 102
Query: 617 NSRIMIHQPSGGVRGQATDIQIQAEEILKLKAQINNLYVRHTGL 748
N+ M H + G+ G A +++ A+ + K+K Q+ +YV G+
Sbjct: 103 NTMAMTHNVASGIWGTADELRDHADTMDKVKGQLRGIYVDRLGV 146
>UniRef50_A1FMT8 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=1; Pseudomonas putida W619|Rep: ATP-dependent
Clp protease proteolytic subunit - Pseudomonas putida
W619
Length = 620
Score = 56.4 bits (130), Expect = 7e-07
Identities = 35/107 (32%), Positives = 56/107 (52%)
Frame = +2
Query: 443 PVHLYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNS 622
P+ + INSPGG+VT L IY ++ T + T V C+ A+ L+A A + A +S
Sbjct: 26 PITVQINSPGGSVTDALAIYTVLRKHTGRV-TAIVDGLCASAATLVALAADEIVMA-EHS 83
Query: 623 RIMIHQPSGGVRGQATDIQIQAEEILKLKAQINNLYVRHTGLXLEKV 763
+M+H P G A +++ A+ + ++ LY TGL EK+
Sbjct: 84 LMMVHNPWTVASGDADEMRKTADTLDVASREMTALYTERTGLSAEKI 130
>UniRef50_Q9T1F7 Cluster: Putative uncharacterized protein; n=1;
Lactobacillus phage phiadh|Rep: Putative uncharacterized
protein - Lactobacillus phage phiadh
Length = 242
Score = 56.4 bits (130), Expect = 7e-07
Identities = 39/114 (34%), Positives = 57/114 (50%), Gaps = 1/114 (0%)
Frame = +2
Query: 425 SESSKKPVHLYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMAS-LLLAAGAPGM 601
+E++ V L INSPGG V AG IY ++ + GQACS AS + LAA M
Sbjct: 40 NEANGSDVTLEINSPGGYVDAGSEIYTALKEYQGQVIAKITGQACSAASWIALAADRIEM 99
Query: 602 RHALPNSRIMIHQPSGGVRGQATDIQIQAEEILKLKAQINNLYVRHTGLXLEKV 763
P +++MIH+ S G + D+ + L +LY + TGL ++V
Sbjct: 100 S---PTAQMMIHRASTISIGNSDDLASDLNALNSLDKSFVDLYSQRTGLDAQEV 150
>UniRef50_Q4A301 Cluster: Putative ATP-dependent protease
proteolytic subunit; n=1; Emiliania huxleyi virus
86|Rep: Putative ATP-dependent protease proteolytic
subunit - Emiliania huxleyi virus 86
Length = 238
Score = 54.4 bits (125), Expect = 3e-06
Identities = 32/101 (31%), Positives = 54/101 (53%)
Frame = +2
Query: 446 VHLYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSR 625
V LYI+S GG + AG + ++ P+ T G S A+ LL AG+ R+ +P+S
Sbjct: 105 VSLYIHSCGGDLFAGFSAFSLIRRNVIPVVTIADGYVASAATFLLLAGS--YRYIVPSSH 162
Query: 626 IMIHQPSGGVRGQATDIQIQAEEILKLKAQINNLYVRHTGL 748
++IHQ S G G+ +I+ + ++ +++ LY T L
Sbjct: 163 VLIHQLSTGGYGKFQEIEDDYKNCKRIMERMHALYKEETWL 203
>UniRef50_Q1UAH7 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=2; Lactobacillus|Rep: ATP-dependent Clp
protease proteolytic subunit - Lactobacillus reuteri
100-23
Length = 258
Score = 54.4 bits (125), Expect = 3e-06
Identities = 33/114 (28%), Positives = 61/114 (53%)
Frame = +2
Query: 419 LQSESSKKPVHLYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPG 598
L+S K ++L+INSPGG+V G+ IY+ ++ + I + G A S+AS++ +G
Sbjct: 48 LKSLGDVKNINLHINSPGGSVFEGIAIYNMLKQNSAHINVYIDGLAASIASVIAMSGDAI 107
Query: 599 MRHALPNSRIMIHQPSGGVRGQATDIQIQAEEILKLKAQINNLYVRHTGLXLEK 760
+ NS +M+H P G A +++ QA+ + ++ Y+ G L++
Sbjct: 108 FMPS--NSMMMVHNPWVMAIGNANELRKQADALDQITKSSVQTYLAKAGDKLDE 159
>UniRef50_A5KJS2 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=2; Ruminococcus|Rep: ATP-dependent Clp
protease proteolytic subunit - Ruminococcus torques ATCC
27756
Length = 268
Score = 54.4 bits (125), Expect = 3e-06
Identities = 41/136 (30%), Positives = 64/136 (47%), Gaps = 2/136 (1%)
Frame = +2
Query: 347 ERIICLMGPINDDI--SSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIYDTMQYI 520
ER + L G I+D+ + QL + + + ++INSPGG V A IY+ ++
Sbjct: 20 ERTLFLNGMISDETWYGDEVTPQLFKDELNAGNGNITVWINSPGGDVFAAAQIYNMLRDY 79
Query: 521 TPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQPSGGVRGQATDIQIQAEEIL 700
+ G A S AS++ AG P + +MIH P+ G+A D+Q +
Sbjct: 80 KGSVTVKIDGIAASAASVIAMAGDTVC--VSPVAMMMIHNPATMAMGEAKDMQKAIAMLN 137
Query: 701 KLKAQINNLYVRHTGL 748
++K I N Y TGL
Sbjct: 138 EVKESILNAYEFKTGL 153
>UniRef50_A0IWL1 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=1; Serratia proteamaculans 568|Rep:
ATP-dependent Clp protease proteolytic subunit -
Serratia proteamaculans 568
Length = 365
Score = 54.4 bits (125), Expect = 3e-06
Identities = 40/129 (31%), Positives = 63/129 (48%), Gaps = 1/129 (0%)
Frame = +2
Query: 380 DDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQAC 559
DD++S VA L + K +H+ INS GG+V I T++ T + + G A
Sbjct: 34 DDVNSRDVATQL---KAVTSKEIHVKINSYGGSVFTAQAILSTLKRHTAAVTVFIDGIAA 90
Query: 560 SMASLLLAAGAPGMRHALP-NSRIMIHQPSGGVRGQATDIQIQAEEILKLKAQINNLYVR 736
S A+++ AG R +P N+ +MIH P G A D + A+ + +++ I Y
Sbjct: 91 SAATIIAMAGE---RVVIPSNAMMMIHNPLTWADGNAADFREYADMLDRIRDSIIAAYQS 147
Query: 737 HTGLXLEKV 763
T L EK+
Sbjct: 148 KTSLTHEKL 156
>UniRef50_O04018 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=2; core eudicotyledons|Rep: ATP-dependent Clp
protease proteolytic subunit - Arabidopsis thaliana
(Mouse-ear cress)
Length = 292
Score = 54.4 bits (125), Expect = 3e-06
Identities = 38/110 (34%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Frame = +2
Query: 323 DIYSRLLRERIICLMGPINDDI---------SSLIVAQLLFLQSESSKKPVHLYINSPGG 475
D+ S LL RI+ + P +DDI + L+VA+L++LQ K+P+++YINS G
Sbjct: 121 DLPSMLLDGRIVYIGMPTDDDIFCFQLVPAVTELVVAELMYLQWLDPKEPIYIYINSTGT 180
Query: 476 AVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSR 625
G ++ T CVG A A LLL+AG G R +P+++
Sbjct: 181 TRDDGETVH-----------TVCVGAAIGQACLLLSAGTKGKRFMMPHAK 219
>UniRef50_A7FWE0 Cluster: Putative Clp protease; n=1; Clostridium
botulinum A str. ATCC 19397|Rep: Putative Clp protease -
Clostridium botulinum (strain ATCC 19397 / Type A)
Length = 252
Score = 54.0 bits (124), Expect = 4e-06
Identities = 33/105 (31%), Positives = 55/105 (52%)
Frame = +2
Query: 446 VHLYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSR 625
+++YINSPGG+V G IY+ ++ I G A S+AS++ AG NS
Sbjct: 55 LNIYINSPGGSVFQGQAIYNIIKRHKAKINIHVDGVAASIASVIAMAG--NTIFMPKNSM 112
Query: 626 IMIHQPSGGVRGQATDIQIQAEEILKLKAQINNLYVRHTGLXLEK 760
+MIH P G A +++ QA+++ K++ + Y+ G L +
Sbjct: 113 MMIHNPWTFAYGNAKELRKQADDLDKIRESLIEAYLSKAGDKLSR 157
>UniRef50_Q0SPK3 Cluster: Clp protease domain protein; n=2;
root|Rep: Clp protease domain protein - Clostridium
perfringens phage phiSM101
Length = 243
Score = 54.0 bits (124), Expect = 4e-06
Identities = 36/115 (31%), Positives = 55/115 (47%)
Frame = +2
Query: 419 LQSESSKKPVHLYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPG 598
+ S + + + INS GG V G IY ++ + VG A S AS++ A G
Sbjct: 36 INSVQQGEQLEVIINSNGGYVDEGSEIYTLLKDYNGEVVIKIVGMAASAASVI-AMGGDK 94
Query: 599 MRHALPNSRIMIHQPSGGVRGQATDIQIQAEEILKLKAQINNLYVRHTGLXLEKV 763
++ + P RIMIH +GGV G ++ AE + I N Y TG+ E++
Sbjct: 95 VKIS-PTGRIMIHNAAGGVCGDYRQMEHGAEVLKDCNEAIANAYALKTGMSKEEL 148
>UniRef50_Q892G9 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=2; Firmicutes|Rep: ATP-dependent Clp protease
proteolytic subunit - Clostridium tetani
Length = 226
Score = 53.6 bits (123), Expect = 5e-06
Identities = 35/115 (30%), Positives = 57/115 (49%)
Frame = +2
Query: 419 LQSESSKKPVHLYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPG 598
L + + + + + INS GG+V AG IY ++ + VG A S AS++ AG
Sbjct: 35 LSNSKNNEGLEVEINSGGGSVFAGSEIYTLLKDYKGNVTVKIVGLAASAASVIAMAGDKV 94
Query: 599 MRHALPNSRIMIHQPSGGVRGQATDIQIQAEEILKLKAQINNLYVRHTGLXLEKV 763
+ P +IMIH SG G +++ +E + + I+N Y TGL E++
Sbjct: 95 L--ISPTGQIMIHNASGCFSGDYRNMEKGSEILKNVNITISNAYKLKTGLSSEEL 147
>UniRef50_Q65KG4 Cluster: Putative uncharacterized protein; n=1;
Bacillus licheniformis ATCC 14580|Rep: Putative
uncharacterized protein - Bacillus licheniformis (strain
DSM 13 / ATCC 14580)
Length = 248
Score = 53.6 bits (123), Expect = 5e-06
Identities = 30/105 (28%), Positives = 58/105 (55%)
Frame = +2
Query: 446 VHLYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSR 625
+++YINSPGG+V G IY+ ++ + + G A S+AS++ +G A N+
Sbjct: 56 LNIYINSPGGSVFEGNSIYNIIKRHKAHVNVYVDGLAASIASVIAMSGDAIFMPA--NAM 113
Query: 626 IMIHQPSGGVRGQATDIQIQAEEILKLKAQINNLYVRHTGLXLEK 760
+MIH P +G A +++ QA+++ +++ + Y+ G L +
Sbjct: 114 MMIHNPWTVAQGNAEELRKQADDMDRIRESLIEAYLGKAGEKLNR 158
>UniRef50_Q65ES6 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=2; Bacillus licheniformis ATCC 14580|Rep:
ATP-dependent Clp protease proteolytic subunit -
Bacillus licheniformis (strain DSM 13 / ATCC 14580)
Length = 243
Score = 53.6 bits (123), Expect = 5e-06
Identities = 36/114 (31%), Positives = 58/114 (50%), Gaps = 1/114 (0%)
Frame = +2
Query: 419 LQSESSKKPVHLYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPG 598
L+S + LYINSPGG V G I+ +Q I + A S+AS++ AG
Sbjct: 48 LKSLGDVSSIDLYINSPGGDVFEGQAIHSMLQRHKAKINVYVDALAGSIASVIAMAGD-- 105
Query: 599 MRHALP-NSRIMIHQPSGGVRGQATDIQIQAEEILKLKAQINNLYVRHTGLXLE 757
+ +P N+ +MIH P G+ G A + + A+++ K+ I + Y+ G L+
Sbjct: 106 -KITMPSNAMMMIHNPYMGMVGNAAEFRKAADDLDKITESIVSTYLAKAGDKLD 158
>UniRef50_Q3LW56 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=1; Bigelowiella natans|Rep: ATP-dependent Clp
protease proteolytic subunit - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 183
Score = 53.6 bits (123), Expect = 5e-06
Identities = 35/143 (24%), Positives = 74/143 (51%), Gaps = 8/143 (5%)
Frame = +2
Query: 338 LLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPGGA-------VTAGLG 496
LL + I+ L I+ + + ++ +L+L++++S + ++LYIN G + +
Sbjct: 9 LLEKNILYLSTEIDFNSTKSFISTILYLKNKNSNETINLYINGKGSSYYNLFSRYDQIIS 68
Query: 497 IYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQPSGGV-RGQATD 673
++D + + ++T +G A + L+ + G+ R+ALP+S + I + Q +D
Sbjct: 69 MHDIINSMKSKLSTLVLGIAFNEMCLISSYGSKDYRYALPSSLLYIDVFMNSIGSSQTSD 128
Query: 674 IQIQAEEILKLKAQINNLYVRHT 742
I I+ E+ K I N++ +HT
Sbjct: 129 IGIKKSELYKFNNLIINIFSKHT 151
>UniRef50_A3DG62 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=2; root|Rep: ATP-dependent Clp protease
proteolytic subunit - Clostridium thermocellum (strain
ATCC 27405 / DSM 1237)
Length = 247
Score = 52.0 bits (119), Expect = 2e-05
Identities = 35/108 (32%), Positives = 55/108 (50%)
Frame = +2
Query: 440 KPVHLYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPN 619
K ++++INS GG V A IY ++ + G A S AS++ AG + P
Sbjct: 55 KDINVWINSYGGDVYAASRIYTGLKEHKGKVKVKIDGVAISAASVIAMAGDEILMS--PT 112
Query: 620 SRIMIHQPSGGVRGQATDIQIQAEEILKLKAQINNLYVRHTGLXLEKV 763
S IM+H P G +G+A D++ A+ + ++K I N Y TG K+
Sbjct: 113 SIIMLHNPWGTFQGEAKDLRHGADVLDEVKETIINAYQLKTGKSRAKI 160
>UniRef50_Q97HW4 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=5; Firmicutes|Rep: ATP-dependent Clp protease
proteolytic subunit - Clostridium acetobutylicum
Length = 256
Score = 51.6 bits (118), Expect = 2e-05
Identities = 31/127 (24%), Positives = 65/127 (51%)
Frame = +2
Query: 380 DDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQAC 559
DD + + L + + ++L++NSPGG+V G+ I + ++ + + + A
Sbjct: 41 DDTDTTAASFKKDLDALGNLNTINLHLNSPGGSVFEGVTICNMLKQNSATVNVYVDALAA 100
Query: 560 SMASLLLAAGAPGMRHALPNSRIMIHQPSGGVRGQATDIQIQAEEILKLKAQINNLYVRH 739
S+AS++ AG N+ +M+H PS V G ++D++ A+++ K+ + Y+
Sbjct: 101 SIASVIAMAG--DTIFMPKNAMLMVHNPSSVVWGNSSDMRKTADDLDKIGLSMQQSYLAK 158
Query: 740 TGLXLEK 760
G L++
Sbjct: 159 AGDKLDQ 165
>UniRef50_Q6SZ10 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=12; Bacteria|Rep: ATP-dependent Clp protease
proteolytic subunit - Streptococcus pyogenes
Length = 228
Score = 51.2 bits (117), Expect = 3e-05
Identities = 40/143 (27%), Positives = 66/143 (46%), Gaps = 2/143 (1%)
Frame = +2
Query: 347 ERIICLMGPINDD--ISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIYDTMQYI 520
ER + L G I + + QL + S + + L+INSPGG V A IY+ +
Sbjct: 13 ERTLFLNGVIASESWFGDEVTPQLFKDELLSEQGDITLWINSPGGDVFAAAQIYNMLMDY 72
Query: 521 TPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQPSGGVRGQATDIQIQAEEIL 700
+ G A S AS++ AG + + P S +MIH P+ G +++ + +
Sbjct: 73 KGAVTVNIDGIAASAASVIAMAGT--IVNMSPVSMMMIHNPATFASGDKREMEKAIQLLN 130
Query: 701 KLKAQINNLYVRHTGLXLEKVQS 769
++K I N Y T L +K+ +
Sbjct: 131 EVKESIINAYEIKTSLSRQKLSN 153
>UniRef50_Q3Z3P3 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=2; Enterobacteriaceae|Rep: ATP-dependent Clp
protease proteolytic subunit - Shigella sonnei (strain
Ss046)
Length = 381
Score = 50.8 bits (116), Expect = 4e-05
Identities = 33/107 (30%), Positives = 52/107 (48%), Gaps = 1/107 (0%)
Frame = +2
Query: 446 VHLYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALP-NS 622
+HL I+SPGG + GL IY+ ++ G A SMAS + G +P N+
Sbjct: 45 IHLRIHSPGGDIFEGLAIYNALKNHPAKKIVHIEGMAASMASFIAMCGD---HIVMPENA 101
Query: 623 RIMIHQPSGGVRGQATDIQIQAEEILKLKAQINNLYVRHTGLXLEKV 763
+MIH P G G + D++ A+ + KL + Y TG +++
Sbjct: 102 MMMIHAPRGVTAGVSGDVRRFADLMDKLGDTMAETYAGRTGRSKQEI 148
>UniRef50_A3JIS6 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=1; Marinobacter sp. ELB17|Rep: ATP-dependent
Clp protease proteolytic subunit - Marinobacter sp.
ELB17
Length = 621
Score = 50.8 bits (116), Expect = 4e-05
Identities = 44/143 (30%), Positives = 72/143 (50%), Gaps = 1/143 (0%)
Frame = +2
Query: 338 LLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIYDTMQY 517
LL + I + GPI + S A + L++ + + V++ INS GG V+ + IY+ +
Sbjct: 8 LLAQNEIYIYGPIGEGNVSA-KAFVDALKTLDTAQTVNVRINSEGGDVSHAIAIYNALNE 66
Query: 518 ITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQPSGGVRGQATDIQIQAEEI 697
+ P + G A S AS + AG + N+ +MIH+P G G +D Q EI
Sbjct: 67 L-PDVMIHIDGLAASSASFVAMAGNKTLMAG--NAILMIHRPWTGAVGD-SDAMRQTGEI 122
Query: 698 L-KLKAQINNLYVRHTGLXLEKV 763
L K + + + Y + TGL +K+
Sbjct: 123 LDKFQPILVSAYAKKTGLSDDKL 145
>UniRef50_A1VPI3 Cluster: Peptidase S14, ClpP precursor; n=1;
Polaromonas naphthalenivorans CJ2|Rep: Peptidase S14,
ClpP precursor - Polaromonas naphthalenivorans (strain
CJ2)
Length = 674
Score = 50.8 bits (116), Expect = 4e-05
Identities = 31/96 (32%), Positives = 50/96 (52%)
Frame = +2
Query: 458 INSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIH 637
INS GG+V GL IY+ ++ + G A S+ASL+ AG + N+ +MIH
Sbjct: 66 INSIGGSVPDGLAIYNALRRHKAEVTIEIDGMALSVASLIAMAG--DKVNMANNAMLMIH 123
Query: 638 QPSGGVRGQATDIQIQAEEILKLKAQINNLYVRHTG 745
P V G + +++ A+++ A ++N Y TG
Sbjct: 124 GPWSYVSGNSVELRDMADQLDTWAAAMSNSYAARTG 159
>UniRef50_Q5KRF8 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=2; Corynebacterium glutamicum|Rep:
ATP-dependent Clp protease proteolytic subunit -
Corynebacterium glutamicum (Brevibacterium flavum)
Length = 459
Score = 50.4 bits (115), Expect = 5e-05
Identities = 33/101 (32%), Positives = 51/101 (50%)
Frame = +2
Query: 443 PVHLYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNS 622
PV + INS GGAV G I + + G A S AS++ AG+ + S
Sbjct: 27 PVTVRINSFGGAVDVGHTIRHLLADHPGHVTCVVDGVAASAASIIAIAGSDELVMR-EGS 85
Query: 623 RIMIHQPSGGVRGQATDIQIQAEEILKLKAQINNLYVRHTG 745
+MIHQ S G+ G ++ ++ AE + K+ A++ N+Y G
Sbjct: 86 ELMIHQASLGMDGNSSSLRSMAERLEKMDAELANVYASKAG 126
>UniRef50_A5NH97 Cluster: Peptidase S14, ClpP precursor; n=19;
root|Rep: Peptidase S14, ClpP precursor - Shewanella
baltica OS223
Length = 690
Score = 50.4 bits (115), Expect = 5e-05
Identities = 31/104 (29%), Positives = 55/104 (52%)
Frame = +2
Query: 458 INSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIH 637
I+SPGG V G+ IY+ ++ + G A SMAS++ A + N+ +M+H
Sbjct: 82 IHSPGGDVFEGMAIYNMIKGHPAHKVCYIDGLAASMASVIAMAFDEVIMPE--NAMMMVH 139
Query: 638 QPSGGVRGQATDIQIQAEEILKLKAQINNLYVRHTGLXLEKVQS 769
+P GG G A D++ A+ + K++ + Y TGL +++ +
Sbjct: 140 KPWGGTLGDAEDMRKYADLLDKVEGNLVGAYQHKTGLSEDELHA 183
>UniRef50_A6N1Z7 Cluster: Clp protease; n=1; Microbacterium phage
Min1|Rep: Clp protease - Microbacterium phage Min1
Length = 399
Score = 50.0 bits (114), Expect = 6e-05
Identities = 31/98 (31%), Positives = 49/98 (50%)
Frame = +2
Query: 452 LYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIM 631
++INSPGGA G+ I + ++ + G A S AS++ G + +++M
Sbjct: 65 VHINSPGGAAWDGITIMNALRAHKAQVHVVVDGLAASAASVIAMGGDTITMNR--GAQMM 122
Query: 632 IHQPSGGVRGQATDIQIQAEEILKLKAQINNLYVRHTG 745
IH SGGV G A +++ A + KL I + Y TG
Sbjct: 123 IHDASGGVWGNAAEVEAVATILHKLSDSIADTYAARTG 160
>UniRef50_A5V8D3 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=1; Sphingomonas wittichii RW1|Rep:
ATP-dependent Clp protease proteolytic subunit -
Sphingomonas wittichii RW1
Length = 688
Score = 49.6 bits (113), Expect = 8e-05
Identities = 40/134 (29%), Positives = 65/134 (48%), Gaps = 3/134 (2%)
Frame = +2
Query: 356 ICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIYDTM---QYITP 526
I + G + D L ++ L S + + + INSPGG V GL IY+ + +
Sbjct: 4 ILIYGIVGDSWDGLDANTIVPLIS-AGDDDLDVRINSPGGYVMEGLAIYNAIIRERGKGR 62
Query: 527 PIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQPSGGVRGQATDIQIQAEEILKL 706
+ T G A SM S+L AG + N+ +MIH P G A +++ A+ + +L
Sbjct: 63 KVTTHIDGLAASMGSILAMAGEEIVM--ADNALLMIHNPWDCACGDAIELRRAADRLDQL 120
Query: 707 KAQINNLYVRHTGL 748
+ Q+ +Y + TGL
Sbjct: 121 RDQMVGIYSKATGL 134
>UniRef50_A3F644 Cluster: Head maturation protease; n=3; root|Rep:
Head maturation protease - Streptococcus phage phi3396
Length = 268
Score = 49.6 bits (113), Expect = 8e-05
Identities = 32/110 (29%), Positives = 52/110 (47%)
Frame = +2
Query: 416 FLQSESSKKPVHLYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAP 595
FL S + + + +NS GG V G IY ++ + G A S+AS+++ AG
Sbjct: 35 FLDSAGGED-IQVRLNSGGGEVFVGSEIYSALKDYPGNVEVVITGLAASIASIIMLAG-- 91
Query: 596 GMRHALPNSRIMIHQPSGGVRGQATDIQIQAEEILKLKAQINNLYVRHTG 745
+ A P ++IMIH S G G ++ +E + + +Y R TG
Sbjct: 92 DVIKASPMAQIMIHNASWGSYGDYRQLKHDSEVVENASISLAGMYARKTG 141
>UniRef50_Q3LVU8 Cluster: Clp protease; n=1; Bigelowiella
natans|Rep: Clp protease - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 204
Score = 49.2 bits (112), Expect = 1e-04
Identities = 30/112 (26%), Positives = 59/112 (52%), Gaps = 5/112 (4%)
Frame = +2
Query: 311 ERAYDIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSP-----GG 475
++ YDI S++ + II + PIN I L+++Q++FL + ++IN+P
Sbjct: 31 KKFYDISSKIYEKNIIFIGQPINTFIVQLLISQVIFLFMNRKNEKNRIFINTPYQTKNNF 90
Query: 476 AVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIM 631
T+ L +Y+ +Q I +++ +G L+L++G R+ L NS ++
Sbjct: 91 LYTSDLYLYNFLQTIRFEYSSYNIGLCNYDIGLILSSGIKSNRYGLKNSIVL 142
>UniRef50_A2Y843 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=3; Oryza sativa|Rep: ATP-dependent Clp
protease proteolytic subunit - Oryza sativa subsp.
indica (Rice)
Length = 398
Score = 48.8 bits (111), Expect = 1e-04
Identities = 31/73 (42%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Frame = +2
Query: 269 LGMIPIVVEQTGRGER-----AYDIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSES 433
+GM + + + GRG R A D+ S LL RII L PI ++ LI AQ L+L +
Sbjct: 139 MGMGTMSMGRAGRGYRRMRSSAPDLPSLLLDSRIIFLGMPIVPAVTELIAAQFLWLDYDD 198
Query: 434 SKKPVHLYINSPG 472
KP++LYINS G
Sbjct: 199 RTKPIYLYINSTG 211
>UniRef50_Q7WLQ1 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=13; root|Rep: ATP-dependent Clp protease
proteolytic subunit - Bordetella bronchiseptica
(Alcaligenes bronchisepticus)
Length = 291
Score = 48.4 bits (110), Expect = 2e-04
Identities = 31/108 (28%), Positives = 53/108 (49%)
Frame = +2
Query: 443 PVHLYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNS 622
PV + +NSPGG + GL IY+ ++ + +G A S AS++ AG R
Sbjct: 78 PVTVNVNSPGGDMFEGLAIYNLLREHQGEVTVKVLGLAASAASIIAMAG--DKRQIARAG 135
Query: 623 RIMIHQPSGGVRGQATDIQIQAEEILKLKAQINNLYVRHTGLXLEKVQ 766
+M+H +G D++ A+ + A + ++YV +G L +VQ
Sbjct: 136 FLMVHNCWVNAQGNRHDLREFADTMEPFDAAMADIYVASSGQDLGEVQ 183
>UniRef50_A4J7R2 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=1; Desulfotomaculum reducens MI-1|Rep:
ATP-dependent Clp protease proteolytic subunit -
Desulfotomaculum reducens MI-1
Length = 258
Score = 47.6 bits (108), Expect = 3e-04
Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 1/100 (1%)
Frame = +2
Query: 440 KPVHLYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALP- 616
K + ++INS GG+V G IY ++ + G ACS+AS++ AG R +P
Sbjct: 57 KEIKIFINSYGGSVFEGTAIYSQLRRHPAQKTVYIDGFACSVASVIAMAGD---RVIMPK 113
Query: 617 NSRIMIHQPSGGVRGQATDIQIQAEEILKLKAQINNLYVR 736
N+ +MIH V G AT ++ A+++ + A Y++
Sbjct: 114 NTMMMIHNAWNIVAGNATQLRKAADDLDTIMAGNRQSYLQ 153
>UniRef50_Q4ZD75 Cluster: ORF013; n=2; root|Rep: ORF013 -
Staphylococcus phage 2638A
Length = 299
Score = 47.2 bits (107), Expect = 5e-04
Identities = 34/139 (24%), Positives = 64/139 (46%), Gaps = 1/139 (0%)
Frame = +2
Query: 350 RIICLMGPI-NDDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIYDTMQYITP 526
+I+ L G + +DD + I + + + S K + + + S GG G+ IY+ ++ +
Sbjct: 44 QILTLNGVVASDDFENTISHKKIEAALKGSDKNIVIKLASGGGDAFEGINIYNYLKSLKN 103
Query: 527 PIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQPSGGVRGQATDIQIQAEEILKL 706
+ A S AS++ AG + H S +MIH+ S G TDI+ + +
Sbjct: 104 HVTIEITSIAASAASIIAMAGDKIVMHT--GSNMMIHEASTFAFGSKTDIRKTLNALESV 161
Query: 707 KAQINNLYVRHTGLXLEKV 763
I ++Y TG+ ++
Sbjct: 162 DKSIVDVYYNRTGVDKNEI 180
>UniRef50_Q3DME6 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=2; Streptococcus agalactiae|Rep:
ATP-dependent Clp protease proteolytic subunit -
Streptococcus agalactiae 515
Length = 243
Score = 46.8 bits (106), Expect = 6e-04
Identities = 32/106 (30%), Positives = 49/106 (46%)
Frame = +2
Query: 446 VHLYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSR 625
+ + INS GG V AG IY ++ + VG A S AS++ AG + P ++
Sbjct: 41 IEVLINSGGGDVYAGSEIYTALKSYQGNVTVKIVGIAASAASVIAMAG--DVVEISPTAQ 98
Query: 626 IMIHQPSGGVRGQATDIQIQAEEILKLKAQINNLYVRHTGLXLEKV 763
+MIH S V G + +A + I N YV T L + ++
Sbjct: 99 LMIHNVSTTVSGDHKQMLHEAGVLENYNISIANAYVNKTDLEMNEL 144
>UniRef50_A5ZRV6 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=1; Ruminococcus obeum ATCC 29174|Rep:
ATP-dependent Clp protease proteolytic subunit -
Ruminococcus obeum ATCC 29174
Length = 252
Score = 46.8 bits (106), Expect = 6e-04
Identities = 31/94 (32%), Positives = 48/94 (51%)
Frame = +2
Query: 452 LYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIM 631
+YINS GG V AG+ I+ + T G A S+AS++L A + + ++IM
Sbjct: 74 VYINSGGGDVFAGIAIHSILSRHTGHKTGIVDGMAASIASVILMACDSIVMSS--GAQIM 131
Query: 632 IHQPSGGVRGQATDIQIQAEEILKLKAQINNLYV 733
IH+P G A D Q E+ K + I ++Y+
Sbjct: 132 IHKPLSWAYGNADDFQRLISELDKCQKSITDIYM 165
>UniRef50_Q0S7S6 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=1; Rhodococcus sp. RHA1|Rep: ATP-dependent
Clp protease proteolytic subunit - Rhodococcus sp.
(strain RHA1)
Length = 219
Score = 46.4 bits (105), Expect = 8e-04
Identities = 32/119 (26%), Positives = 53/119 (44%)
Frame = +2
Query: 335 RLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIYDTMQ 514
RL +RI+ L G ++ + ++ A L L + S V L+++ V A + DT+
Sbjct: 47 RLFDKRIVSLTGRLDSEATNRAAASLALLDA-SGDGEVQLWLHGVDADVDAAATLLDTLD 105
Query: 515 YITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQPSGGVRGQATDIQIQAE 691
+ P+ C G MA LA R A ++ + +P G A+D+ I AE
Sbjct: 106 LMGVPLHVHCRGDVRGMAVAFLAPA--DRRTAASHATFHLREPQTSCTGPASDVAIAAE 162
>UniRef50_A7GI71 Cluster: Putative Clp protease; n=1; Clostridium
botulinum F str. Langeland|Rep: Putative Clp protease -
Clostridium botulinum (strain Langeland / NCTC 10281 /
Type F)
Length = 266
Score = 46.0 bits (104), Expect = 0.001
Identities = 36/110 (32%), Positives = 55/110 (50%), Gaps = 8/110 (7%)
Frame = +2
Query: 416 FLQSESSKKPVHLYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAP 595
FL+ + K + +YINS GG+V AGL IY ++ G A S+ S++ G
Sbjct: 62 FLKEIDNNKELDIYINSGGGSVFAGLAIYHQLKRHNGFKTVHVDGLAASITSVIALVGDK 121
Query: 596 GMRHALPNSRIMIHQP-------SGGVRGQATDIQIQAEEILKL-KAQIN 721
+ A ++ MIH+P + R QA D+ I E ILK+ +A +N
Sbjct: 122 VVIPA--PAQFMIHKPWTIALGNANEFRKQANDLDIAEESILKIYEANLN 169
>UniRef50_A5EQQ6 Cluster: Putative Peptidase S14, ClpP; n=1;
Bradyrhizobium sp. BTAi1|Rep: Putative Peptidase S14,
ClpP - Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182)
Length = 684
Score = 46.0 bits (104), Expect = 0.001
Identities = 35/104 (33%), Positives = 49/104 (47%), Gaps = 1/104 (0%)
Frame = +2
Query: 458 INSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAP-GMRHALPNSRIMI 634
INS GG T G+ IY ++ I G A S ASL+ AG MR + +MI
Sbjct: 50 INSGGGIATEGMAIYSLLKAHPGKITVAIDGIAASAASLIAMAGDEIEMR---TGAMMMI 106
Query: 635 HQPSGGVRGQATDIQIQAEEILKLKAQINNLYVRHTGLXLEKVQ 766
H PSG RG A + A + KL ++Y G+ ++V+
Sbjct: 107 HDPSGYTRGPAKVHEDAAAFLHKLADNYASVYAIRAGMDAKEVR 150
>UniRef50_A3EHW0 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=1; Vibrio cholerae V51|Rep: ATP-dependent Clp
protease proteolytic subunit - Vibrio cholerae V51
Length = 292
Score = 45.6 bits (103), Expect = 0.001
Identities = 30/108 (27%), Positives = 56/108 (51%)
Frame = +2
Query: 440 KPVHLYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPN 619
KPV +YINSPGG + G+ I++ +Q + + +G A S AS++ A A R +
Sbjct: 74 KPVTVYINSPGGDMWEGIAIHNRLQEHSQKVTIKVIGIAASAASII--AMASDDRQIATS 131
Query: 620 SRIMIHQPSGGVRGQATDIQIQAEEILKLKAQINNLYVRHTGLXLEKV 763
S +MIH + G ++ A+ + + + ++Y +G +E++
Sbjct: 132 SFLMIHNCWTCICGNRHFMREMADTMEEFDMAMADVYADTSGQPVEEM 179
>UniRef50_A5TX35 Cluster: Endopeptidase Clp; n=1; Fusobacterium
nucleatum subsp. polymorphum ATCC 10953|Rep:
Endopeptidase Clp - Fusobacterium nucleatum subsp.
polymorphum ATCC 10953
Length = 236
Score = 45.2 bits (102), Expect = 0.002
Identities = 33/97 (34%), Positives = 53/97 (54%), Gaps = 1/97 (1%)
Frame = +2
Query: 446 VHLYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALP-NS 622
VH++INS GG V AG+ I + ++ + G + S AS ++A G + +P N+
Sbjct: 58 VHVHINSYGGDVFAGVAISNMLKNHKGKTIAYVDGLSASSAS-IIAFGCKEI--VIPDNA 114
Query: 623 RIMIHQPSGGVRGQATDIQIQAEEILKLKAQINNLYV 733
+MIH+ S G+ G A D Q E + K++ I N Y+
Sbjct: 115 YLMIHRVSCGMFGNADDFLKQIEVMEKIEDGIINTYM 151
>UniRef50_Q01F40 Cluster: Clp protease 2 proteolytic subunit; n=1;
Ostreococcus tauri|Rep: Clp protease 2 proteolytic
subunit - Ostreococcus tauri
Length = 87
Score = 45.2 bits (102), Expect = 0.002
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Frame = +2
Query: 416 FLQSESSKKPVHLYINSPGGAVTAGLGIYDTMQYI----TP--PIATWCVGQACSMASLL 577
+L + + + LYINSPGG+VTAG+ ++DTM+++ TP P C ++C
Sbjct: 3 YLAHSARCRDITLYINSPGGSVTAGMAVFDTMRHVHASLTPFSPTINLCC-KSCDPPRFA 61
Query: 578 LAAGAPGMRHALPNSRIMIHQ 640
L+ + R P I H+
Sbjct: 62 LSCNSRKKRKKRPLHEITSHE 82
>UniRef50_A7R7H5 Cluster: Chromosome undetermined scaffold_1785,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_1785, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 150
Score = 45.2 bits (102), Expect = 0.002
Identities = 20/50 (40%), Positives = 34/50 (68%)
Frame = +2
Query: 323 DIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPG 472
D+ S L + RI+ L + ++ LI+A+ L+LQ + ++KP++LYINS G
Sbjct: 73 DLPSYLFKNRIVYLGMSLVPSVTELILAEFLYLQYDDAEKPIYLYINSTG 122
>UniRef50_Q6R878 Cluster: 77ORF015; n=10; root|Rep: 77ORF015 -
Staphylococcus phage 77
Length = 245
Score = 45.2 bits (102), Expect = 0.002
Identities = 31/92 (33%), Positives = 44/92 (47%)
Frame = +2
Query: 422 QSESSKKPVHLYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGM 601
Q E S + V + INS GG + AG IY ++ + A S ASL+ AG
Sbjct: 34 QLEFSDEDVDIIINSNGGNLVAGSEIYTHLRAHKGKVNVRITAIAASAASLIAMAG--DH 91
Query: 602 RHALPNSRIMIHQPSGGVRGQATDIQIQAEEI 697
P +R+MIH PS +G+ D+ AE +
Sbjct: 92 IEMSPVARMMIHNPSSIAQGEVKDLNHAAETL 123
>UniRef50_Q1A0W9 Cluster: Gp102; n=2; unclassified Siphoviridae|Rep:
Gp102 - Mycobacterium phage 244
Length = 286
Score = 45.2 bits (102), Expect = 0.002
Identities = 40/137 (29%), Positives = 61/137 (44%), Gaps = 13/137 (9%)
Frame = +2
Query: 374 INDDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIYDTM-QYITPP------- 529
+ND + QL E +H+ +NSPGG+V AG+ ++D + Y T P
Sbjct: 118 VNDYSVEACLNQLALWHREDPNCDMHIVMNSPGGSVIAGMHLFDQIAAYSTRPWDTSDRP 177
Query: 530 ----IATWCV-GQACSMASLLLAAGAPGMRHALPNSRIMIHQPSGGVRGQATDIQIQAEE 694
T V G A SM +LL + R P + +MIH+ S G G+ +I+
Sbjct: 178 KGTHKTTMTVRGMAASMGGILLQ--SVDERIIGPEAYLMIHEISAGTGGKIGEIEDMVGW 235
Query: 695 ILKLKAQINNLYVRHTG 745
L A+I ++V G
Sbjct: 236 YRHLCARIAKVFVHRAG 252
>UniRef50_Q6WIE4 Cluster: ClpP; n=1; Vibrio phage KVP40|Rep: ClpP -
Bacteriophage KVP40
Length = 239
Score = 44.8 bits (101), Expect = 0.002
Identities = 34/109 (31%), Positives = 50/109 (45%), Gaps = 1/109 (0%)
Frame = +2
Query: 368 GPINDDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIYDT-MQYITPPIATWC 544
GPI + + Q+L SE+ V+L++N+PGG A I D MQ +
Sbjct: 24 GPIEEPNDYEEMLQILHTASETDL--VYLHLNTPGGNFAAACQICDAIMQSKAGAVIACA 81
Query: 545 VGQACSMASLLLAAGAPGMRHALPNSRIMIHQPSGGVRGQATDIQIQAE 691
G+ CS +++ A G H P + M H SGG G+ D QA+
Sbjct: 82 EGEVCSAGTMIFLA-CNGW-HVSPFATFMFHTSSGGQIGKMPDTLKQAK 128
>UniRef50_A7CYV1 Cluster: Peptidase S14 ClpP precursor; n=1;
Opitutaceae bacterium TAV2|Rep: Peptidase S14 ClpP
precursor - Opitutaceae bacterium TAV2
Length = 575
Score = 44.4 bits (100), Expect = 0.003
Identities = 29/101 (28%), Positives = 53/101 (52%), Gaps = 1/101 (0%)
Frame = +2
Query: 341 LRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYIN-SPGGAVTAGLGIYDTMQY 517
+ +R I L GPI+ + I ++ + +++++ P+ + I+ SPGG+V AG I M+
Sbjct: 339 ISDRRIPLNGPISMRTADRIQERIDYFNNQNTEYPIFIVIDASPGGSVMAGYKILKAMEG 398
Query: 518 ITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQ 640
P+ T A SMA+ + +A PN+ ++ HQ
Sbjct: 399 SAAPVYTVVKSFAASMAAGITTLSK--QSYAYPNAILLHHQ 437
>UniRef50_Q7NYX7 Cluster: Putative uncharacterized protein; n=2;
Betaproteobacteria|Rep: Putative uncharacterized protein
- Chromobacterium violaceum
Length = 208
Score = 44.0 bits (99), Expect = 0.004
Identities = 31/106 (29%), Positives = 55/106 (51%), Gaps = 2/106 (1%)
Frame = +2
Query: 374 INDDISSLI-VAQLLF-LQSESSKKPVHLYINSPGGAVTAGLGIYDTMQYITPPIATWCV 547
++++I + I LL+ L++ SS V+L++N+PGG AGL I + + + T
Sbjct: 34 LSEEIGAAIHYTDLLYTLRTASSTDIVYLHLNTPGGNFDAGLQIINNITASQAHVVTILE 93
Query: 548 GQACSMASLLLAAGAPGMRHALPNSRIMIHQPSGGVRGQATDIQIQ 685
+A SM +L+ AG + H ++M H S + G+ + Q Q
Sbjct: 94 ARAYSMGALIFLAGDELVVH--DTCQLMFHNYSSALIGKGNEQQAQ 137
>UniRef50_A7BZX9 Cluster: Secreted protein; n=2; Beggiatoa sp.
PS|Rep: Secreted protein - Beggiatoa sp. PS
Length = 476
Score = 43.2 bits (97), Expect = 0.007
Identities = 34/121 (28%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
Frame = +2
Query: 338 LLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYIN-SPGGAVTAGLGIYDTMQ 514
++ +R I L G I ++ IV ++ + ++S++ P+ L I+ PGG+V G I M+
Sbjct: 247 IISDRKIVLDGIIWPGTANNIVERIQYYNNKSTEYPIFLVIDYCPGGSVMEGTRIVKAMK 306
Query: 515 YITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQPSGGVRGQATDIQIQAEE 694
P+ A SMA+++ +ALP++ I+ HQ G G T+ + Q +
Sbjct: 307 KSRAPVYVVVKALAASMAAVITTLA--DHSYALPDAIIVHHQVWGMSFGNRTEQREQLKI 364
Query: 695 I 697
I
Sbjct: 365 I 365
>UniRef50_A1ZY45 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=5; Microscilla marina ATCC 23134|Rep:
ATP-dependent Clp protease proteolytic subunit -
Microscilla marina ATCC 23134
Length = 429
Score = 43.2 bits (97), Expect = 0.007
Identities = 41/131 (31%), Positives = 65/131 (49%), Gaps = 7/131 (5%)
Frame = +2
Query: 386 ISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIYDTMQYI---TP--PIATWCVG 550
IS A+ LF ++ ++ +++ INSPGG +T GL I + I TP I T+ G
Sbjct: 34 ISGRRFAEELFRLTKRFRR-INVRINSPGGKITDGLSICAAILNINQSTPNVRIDTYVDG 92
Query: 551 QACSMASLLLAAGAP-GMRHALPNSRIMIHQP-SGGVRGQATDIQIQAEEILKLKAQINN 724
A S+A L+ G GM + +++M+H P GG G Q E ++++K +
Sbjct: 93 LALSIAGLIAVCGKKVGMCNF---AKLMLHNPFIGGKNGTQNGGIEQHETLMQVKEMLLT 149
Query: 725 LYVRHTGLXLE 757
L TG +E
Sbjct: 150 LLATRTGQKVE 160
>UniRef50_A5ZPL9 Cluster: Putative uncharacterized protein; n=1;
Ruminococcus obeum ATCC 29174|Rep: Putative
uncharacterized protein - Ruminococcus obeum ATCC 29174
Length = 223
Score = 42.7 bits (96), Expect = 0.010
Identities = 32/116 (27%), Positives = 54/116 (46%), Gaps = 1/116 (0%)
Frame = +2
Query: 419 LQSESSKKPVHLYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPG 598
L S + + + + +NS GG+V AG IY ++ + A S A ++ AG
Sbjct: 36 LNSAAVDEEIEVLVNSGGGSVMAGQEIYSALKQ-KKNVVIKIQSMAGSAAGVIAMAGKCQ 94
Query: 599 MRHALPNSRIMIHQPS-GGVRGQATDIQIQAEEILKLKAQINNLYVRHTGLXLEKV 763
M P + IMIH S G G D+Q AE + ++ + + Y +G L+++
Sbjct: 95 MS---PVAMIMIHNVSMSGASGDYHDMQKNAEILKQMNSALAAAYTEKSGRSLDEI 147
>UniRef50_A7DYB1 Cluster: Putative uncharacterized protein; n=1;
Streptococcus phage M102|Rep: Putative uncharacterized
protein - Streptococcus phage M102
Length = 298
Score = 41.9 bits (94), Expect = 0.017
Identities = 29/127 (22%), Positives = 63/127 (49%)
Frame = +2
Query: 386 ISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSM 565
I+ +A+ + +S+ + L +NS GG+ AG IY ++ + +T +
Sbjct: 24 ITDYTIAEDIISDIRNSEDDITLILNSGGGSYFAGAEIYSELK-ASNQKSTAYIASLAGS 82
Query: 566 ASLLLAAGAPGMRHALPNSRIMIHQPSGGVRGQATDIQIQAEEILKLKAQINNLYVRHTG 745
AS +LA GA R ++++M HQ + G G++ D++ ++ + + A I + ++
Sbjct: 83 ASAILAMGAT-KRVISESAQLMFHQSAIGAFGKSQDLKEVSQMLDSIDAGIAEVLTANSS 141
Query: 746 LXLEKVQ 766
L ++ +
Sbjct: 142 LTKDEAK 148
>UniRef50_Q982R9 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=3; Rhizobiales|Rep: ATP-dependent Clp
protease proteolytic subunit - Rhizobium loti
(Mesorhizobium loti)
Length = 281
Score = 41.5 bits (93), Expect = 0.022
Identities = 29/103 (28%), Positives = 50/103 (48%)
Frame = +2
Query: 458 INSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIH 637
INSPGG + G+ IY+ ++ ++ +G A S AS++ AG + L + +M+H
Sbjct: 82 INSPGGDMFEGIAIYNLLREHKAKVSVQVMGWAASAASIIAMAG-DEISMGL-GTFMMVH 139
Query: 638 QPSGGVRGQATDIQIQAEEILKLKAQINNLYVRHTGLXLEKVQ 766
G V G D++ A + I ++Y TGL ++
Sbjct: 140 NAWGMVVGNRHDMRDAATLFDGFDSAIADIYQARTGLARADIE 182
>UniRef50_A5C4G8 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 443
Score = 41.5 bits (93), Expect = 0.022
Identities = 17/29 (58%), Positives = 22/29 (75%)
Frame = +2
Query: 470 GGAVTAGLGIYDTMQYITPPIATWCVGQA 556
GG VTAG+ I+DTM++I P + T CVG A
Sbjct: 218 GGXVTAGMAIFDTMRHIRPDVPTVCVGLA 246
>UniRef50_Q4ZCT9 Cluster: ORF015; n=14; root|Rep: ORF015 -
Staphylococcus phage 3A
Length = 257
Score = 41.1 bits (92), Expect = 0.030
Identities = 28/96 (29%), Positives = 48/96 (50%)
Frame = +2
Query: 446 VHLYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSR 625
+ ++INS GG+V G IY+ ++ I + A S+AS++ +G H NS
Sbjct: 54 IDVHINSSGGSVFEGHAIYNMLKMHPAKINIYVDALAASIASVIAMSGDTIFMH--KNSF 111
Query: 626 IMIHQPSGGVRGQATDIQIQAEEILKLKAQINNLYV 733
+MIH G A +++ A+ + K A N+ Y+
Sbjct: 112 LMIHNSWVMTVGNAEELRKTADLLEKTDAVSNSAYL 147
>UniRef50_Q8ZSM4 Cluster: Protease IV, conjectural; n=2;
Pyrobaculum|Rep: Protease IV, conjectural - Pyrobaculum
aerophilum
Length = 608
Score = 41.1 bits (92), Expect = 0.030
Identities = 37/129 (28%), Positives = 60/129 (46%), Gaps = 1/129 (0%)
Frame = +2
Query: 239 RQINTSLPKLLGMIPIVVEQTGRGERAYDIYSRLLRERIICLMG-PINDDISSLIVAQLL 415
+ +N+SL + L I +E+ + + + RE +I + PI D ++ +
Sbjct: 50 KTLNSSLTERLASINKTLEELTVRVKRLEKRAAAEREIVIVPVDQPIFDYYVDFLIKYVK 109
Query: 416 FLQSESSKKPVHLYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAP 595
LQ ++ V L INSPGGAV A +Y T++ + + G A S A A A
Sbjct: 110 KLQFDNKTAGVILLINSPGGAVGATERLYSTIKGLNKTVYAVVAGLAASGA--YYTAVAA 167
Query: 596 GMRHALPNS 622
G +A P+S
Sbjct: 168 GRIYATPSS 176
>UniRef50_A5Z441 Cluster: Putative uncharacterized protein; n=1;
Eubacterium ventriosum ATCC 27560|Rep: Putative
uncharacterized protein - Eubacterium ventriosum ATCC
27560
Length = 385
Score = 40.3 bits (90), Expect = 0.052
Identities = 31/106 (29%), Positives = 48/106 (45%), Gaps = 2/106 (1%)
Frame = +2
Query: 458 INSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIH 637
INS GG V A + IY ++ I+ G S A+++ AG MIH
Sbjct: 71 INSGGGDVFAAVAIYTRLKEHKAKISVKIDGWCASAATIIAMAG--DTIEISVGGVFMIH 128
Query: 638 QPSGGVRG--QATDIQIQAEEILKLKAQINNLYVRHTGLXLEKVQS 769
P G+ G TD++ +E+ +K I N Y+ T E+++S
Sbjct: 129 DPLAGLIGYYNTTDLENIVKELETIKQSIVNCYMTVTDKSEEEIKS 174
>UniRef50_Q2AR30 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=1; Bacillus weihenstephanensis KBAB4|Rep:
ATP-dependent Clp protease proteolytic subunit -
Bacillus weihenstephanensis KBAB4
Length = 247
Score = 39.5 bits (88), Expect = 0.091
Identities = 30/105 (28%), Positives = 53/105 (50%), Gaps = 1/105 (0%)
Frame = +2
Query: 419 LQSESSKKPVHLYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPG 598
+Q ++K +H++INS GG+ G+ I + ++ I G A S AS++ AG
Sbjct: 50 IQDVKAEK-IHVHINSGGGSAFDGVAICNLLKQHDAEIIVHIDGWAASAASVIAMAGD-- 106
Query: 599 MRHALP-NSRIMIHQPSGGVRGQATDIQIQAEEILKLKAQINNLY 730
+ +P N+ +MIHQ S G A + A ++ K+ + + Y
Sbjct: 107 -KIVMPSNTMMMIHQASTIEYGNADLFEKTARDLRKIDSALAASY 150
>UniRef50_Q2K642 Cluster: Probable Clp protease protein; n=1;
Rhizobium etli CFN 42|Rep: Probable Clp protease protein
- Rhizobium etli (strain CFN 42 / ATCC 51251)
Length = 694
Score = 39.1 bits (87), Expect = 0.12
Identities = 39/149 (26%), Positives = 67/149 (44%), Gaps = 4/149 (2%)
Frame = +2
Query: 332 SRLLRERIICLMGPIND----DISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGI 499
S+L+ + + L GP+ D S +Q++ S S V + +NS GG G I
Sbjct: 36 SKLIVDGELMLYGPVGFTDFWDESGFTSSQVIEALSALSGDVV-VRLNSGGGIAMEGSAI 94
Query: 500 YDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQPSGGVRGQATDIQ 679
++ ++ + A S ASL+ AG + L + +MIH+PSG G A D +
Sbjct: 95 HNALKRHDGKVIVKIDAIAASAASLIAMAGDE-IEMPL-GTLLMIHEPSGMTLGPADDHR 152
Query: 680 IQAEEILKLKAQINNLYVRHTGLXLEKVQ 766
A + + +Y TGL ++++
Sbjct: 153 RTAGVLDTMTGVFAQVYAERTGLSEKEIR 181
>UniRef50_Q6LHS2 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=3; Photobacterium profundum|Rep:
ATP-dependent Clp protease proteolytic subunit -
Photobacterium profundum (Photobacterium sp. (strain
SS9))
Length = 270
Score = 38.7 bits (86), Expect = 0.16
Identities = 29/102 (28%), Positives = 44/102 (43%)
Frame = +2
Query: 440 KPVHLYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPN 619
K +HL INSPGG+V A + ++ + G A S AS L G +
Sbjct: 75 KNIHLRINSPGGSVFAARTMEQALREHKATVTVHIDGLAASAASFLAMVGDEII--IGEG 132
Query: 620 SRIMIHQPSGGVRGQATDIQIQAEEILKLKAQINNLYVRHTG 745
+ +MIH+ G A D+ +A + KL + Y + G
Sbjct: 133 AMMMIHKAWTVSWGNADDLLAEATLLEKLDGTLAKTYAKRAG 174
>UniRef50_Q2NPI5 Cluster: ClpP family protein; n=3; root|Rep: ClpP
family protein - Xanthomonas phage OP1
Length = 245
Score = 38.7 bits (86), Expect = 0.16
Identities = 28/106 (26%), Positives = 51/106 (48%)
Frame = +2
Query: 446 VHLYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSR 625
V + I+SPGG + AGL IY+ + + VG+A S AS++ +G H ++
Sbjct: 75 VTVNIDSPGGDMFAGLAIYNQLIAHQGKVTVNVVGRAASAASVIAMSGDQINMHT--SAF 132
Query: 626 IMIHQPSGGVRGQATDIQIQAEEILKLKAQINNLYVRHTGLXLEKV 763
+MIH + G A ++ A + + + ++YV + + V
Sbjct: 133 LMIHNCHLVIGGNAKELMSVAAMMEPFDSAMADIYVARSSQAKDTV 178
>UniRef50_Q75QN7 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=5; root|Rep: ATP-dependent Clp protease
proteolytic subunit - Comamonas acidovorans (Pseudomonas
acidovorans) (Delftia acidovorans)
Length = 281
Score = 38.3 bits (85), Expect = 0.21
Identities = 27/103 (26%), Positives = 46/103 (44%)
Frame = +2
Query: 440 KPVHLYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPN 619
+ V + +NSPGG G+ IY+ ++ + +G A S+AS++ AG +
Sbjct: 75 RDVTVNLNSPGGDFFEGMAIYNLLREHKAKVTIRVLGVAASVASVIAMAGDEILMG--DG 132
Query: 620 SRIMIHQPSGGVRGQATDIQIQAEEILKLKAQINNLYVRHTGL 748
S +MIH G D+ A + A + LY +G+
Sbjct: 133 SFLMIHNAWAVAVGNRHDMTDTAAVLAPFDAAMAALYAHRSGI 175
>UniRef50_Q03FG4 Cluster: Protease subunit of ATP-dependent Clp
protease; n=12; root|Rep: Protease subunit of
ATP-dependent Clp protease - Pediococcus pentosaceus
(strain ATCC 25745 / 183-1w)
Length = 251
Score = 37.5 bits (83), Expect = 0.37
Identities = 28/97 (28%), Positives = 44/97 (45%)
Frame = +2
Query: 458 INSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIH 637
I S GG V A IY ++ + G A S AS++ AG + P ++IMIH
Sbjct: 57 IASNGGDVFAASEIYTMLKNYAGNVTVNIQGLAASAASVIAMAG--DHINISPTAQIMIH 114
Query: 638 QPSGGVRGQATDIQIQAEEILKLKAQINNLYVRHTGL 748
+ G A D++ +A + + I + Y TG+
Sbjct: 115 KAWSQPAGNADDLEHEASVLNGIDQSIASAYEAKTGM 151
>UniRef50_A2VQ14 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=2; Betaproteobacteria|Rep: ATP-dependent Clp
protease proteolytic subunit - Burkholderia cenocepacia
PC184
Length = 251
Score = 37.5 bits (83), Expect = 0.37
Identities = 27/100 (27%), Positives = 44/100 (44%)
Frame = +2
Query: 446 VHLYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSR 625
+HL INSPGG V A + ++ + + G A S AS ++ A +
Sbjct: 44 IHLRINSPGGDVFAARAMETAIRGHSARVIAHVDGVAASAASFVMLAA--DEVEITDGAF 101
Query: 626 IMIHQPSGGVRGQATDIQIQAEEILKLKAQINNLYVRHTG 745
+MIH G A D++ A+ + + A + Y + TG
Sbjct: 102 VMIHNAWTFAMGNADDLRESAKLLDAVDASLVRTYAKETG 141
>UniRef50_Q85X42 Cluster: ORF60d; n=1; Pinus koraiensis|Rep: ORF60d
- Pinus koraiensis (Korean pine)
Length = 60
Score = 36.7 bits (81), Expect = 0.64
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = -2
Query: 573 KDAMLHA*PTHHVAIGGVMYCIVS*IPRPAVTAPPGELM 457
KD + A P H V G + CI+S P P +T PPG+L+
Sbjct: 2 KDPIEAATPMHIVCTFGTITCIISKRPTPGITDPPGQLI 40
>UniRef50_Q9ADL6 Cluster: Soraphen polyketide synthase A; n=9;
Bacteria|Rep: Soraphen polyketide synthase A - Polyangium
cellulosum (Sorangium cellulosum)
Length = 6315
Score = 35.9 bits (79), Expect = 1.1
Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 2/70 (2%)
Frame = +2
Query: 473 GAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAA--GAPGMRHALPNSRIMIHQPS 646
GA I D + I P W QA S+ + L A G + H PN R++IH +
Sbjct: 3566 GAACGPTAIADA-RMICPIPHAWSFAQAASVPIIYLTAYYGLVDLGHLKPNQRVLIHAAA 3624
Query: 647 GGVRGQATDI 676
GGV A +
Sbjct: 3625 GGVGTAAVQL 3634
Score = 33.1 bits (72), Expect = 7.9
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +2
Query: 518 ITPPIATWCVGQACSMASLLLAA--GAPGMRHALPNSRIMIHQPSGGVRGQATDI 676
I P W QA S+ + L A G + H PN R++IH +GGV A +
Sbjct: 5654 ICPIPDAWSFVQAASVPVVFLTAYYGLVDVGHLKPNQRVLIHAAAGGVGTAAVQL 5708
>UniRef50_Q11IP3 Cluster: Peptidase S14, ClpP precursor; n=1;
Mesorhizobium sp. BNC1|Rep: Peptidase S14, ClpP
precursor - Mesorhizobium sp. (strain BNC1)
Length = 234
Score = 35.9 bits (79), Expect = 1.1
Identities = 24/98 (24%), Positives = 48/98 (48%), Gaps = 1/98 (1%)
Frame = +2
Query: 356 ICLMGPINDDISSLIVAQLLFLQSE-SSKKPVHLYINSPGGAVTAGLGIYDTMQYITPPI 532
+ +G + + + +V+ L L SE + + ++LYINSPGG + + Y ++ P+
Sbjct: 43 VFFVGEVTERKVAELVSVLDRLNSEHKALQSIYLYINSPGGDMDSAQAAYWAIKSSPIPV 102
Query: 533 ATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQPS 646
+ S+A+++ A R A PN+ ++ S
Sbjct: 103 IAVNISTVASVAAVMFCGAAE--RAAFPNTYFILKPAS 138
>UniRef50_Q53840 Cluster: Soraphen polyketide synthase B; n=2;
cellular organisms|Rep: Soraphen polyketide synthase B -
Polyangium cellulosum (Sorangium cellulosum)
Length = 8817
Score = 35.5 bits (78), Expect = 1.5
Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 2/70 (2%)
Frame = +2
Query: 473 GAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAA--GAPGMRHALPNSRIMIHQPS 646
GA I D + I P W QA S+ + L A G + H PN R++IH +
Sbjct: 3060 GAAFGPTAIADA-RMICPIPHAWSFAQAASVPIIYLTAYYGLVDLGHLKPNQRVLIHAAA 3118
Query: 647 GGVRGQATDI 676
GGV A +
Sbjct: 3119 GGVGTAAVQL 3128
>UniRef50_A7E5X1 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 935
Score = 35.5 bits (78), Expect = 1.5
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = +2
Query: 188 RVGRRLCVGITNVYNVTRQINTSLPKLLGMIPIVVEQTGRGERAYDIYSRL 340
R ++ +T Y+ T +NT + L+ + +++E + + E AYD SRL
Sbjct: 725 RAVQKTITSVTEAYSKTHSLNTIVSDLMSLTNLIIETSKKNEIAYDDLSRL 775
>UniRef50_A7GEE6 Cluster: Putative Clp protease; n=1; Clostridium
botulinum F str. Langeland|Rep: Putative Clp protease -
Clostridium botulinum (strain Langeland / NCTC 10281 /
Type F)
Length = 247
Score = 35.1 bits (77), Expect = 1.9
Identities = 30/125 (24%), Positives = 60/125 (48%), Gaps = 8/125 (6%)
Frame = +2
Query: 419 LQSESSKKPVHLYINSPGGAVTAGLGIYDTMQY-----ITPPIATWCVGQACSMASLLLA 583
L+ + + +++YINS GG+VT GI +Q +T +G +C+ L+A
Sbjct: 44 LEGLTGNETINMYINSVGGSVTTTQGIIAMLQRAKEKGVTINATIDGIGASCASFLPLVA 103
Query: 584 AGAPGMRHALPNSRIMIHQPSGGVRGQATDIQIQAEEILKLKAQI-NNLYVRHT--GLXL 754
+A +S +M+H P G ++Q Q + + K++ + LY+ G+
Sbjct: 104 DNV----YAYKSSLLMVHHPYTLCIGNVDELQKQIDLLNKIENSVMMPLYLNKAKEGITK 159
Query: 755 EKVQS 769
+K+++
Sbjct: 160 DKIKN 164
>UniRef50_Q9NDT9 Cluster: BCS-5; n=1; Balanus amphitrite|Rep: BCS-5
- Balanus amphitrite (Barnacle)
Length = 860
Score = 35.1 bits (77), Expect = 1.9
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = -2
Query: 495 PRPAVTAPPGELMYKWTGFL--LDSDCRNSNCATIKELISSL 376
PRP V AP GE++ TG + L SDC++ CA K + ++
Sbjct: 326 PRPPVAAPSGEVLATSTGVISGLGSDCQDKECAMGKLIADAI 367
>UniRef50_Q1IJ44 Cluster: Signal peptide peptidase SppA, 36K type
precursor; n=1; Acidobacteria bacterium Ellin345|Rep:
Signal peptide peptidase SppA, 36K type precursor -
Acidobacteria bacterium (strain Ellin345)
Length = 303
Score = 34.7 bits (76), Expect = 2.6
Identities = 23/53 (43%), Positives = 29/53 (54%)
Frame = +2
Query: 344 RERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIY 502
R ++ L G I D S +VAQL +SS K + L+INSPGG A IY
Sbjct: 49 RIAVVDLEGVIVDPKS--VVAQLKKYGDDSSIKAIILHINSPGGGAAASEEIY 99
>UniRef50_Q0BEJ3 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=4; Burkholderia|Rep: ATP-dependent Clp
protease proteolytic subunit - Burkholderia cepacia
(strain ATCC 53795 / AMMD)
Length = 361
Score = 34.7 bits (76), Expect = 2.6
Identities = 28/104 (26%), Positives = 47/104 (45%), Gaps = 1/104 (0%)
Frame = +2
Query: 458 INSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALP-NSRIMI 634
INS GG V IY+ ++ + G A S ASL+ AG +P N+ +MI
Sbjct: 56 INSMGGDVFDAFAIYNALRRHAGKVKVRVDGVAASAASLIAMAGD---EIVMPENALLMI 112
Query: 635 HQPSGGVRGQATDIQIQAEEILKLKAQINNLYVRHTGLXLEKVQ 766
H G+A D++ A+ + I Y +G +++++
Sbjct: 113 HNAHTVTAGEAKDLRRIADLLDNAGDGILAAYAAKSGQSIDEIR 156
>UniRef50_O26897 Cluster: Protease IV; n=1; Methanothermobacter
thermautotrophicus str. Delta H|Rep: Protease IV -
Methanobacterium thermoautotrophicum
Length = 287
Score = 34.7 bits (76), Expect = 2.6
Identities = 23/69 (33%), Positives = 30/69 (43%)
Frame = +2
Query: 380 DDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQAC 559
DDI LI S+ S K + L INSPGG A + D + P+ +W
Sbjct: 58 DDIKELIAEA----NSDPSVKAIVLDINSPGGTPVASEELMDAINKSEKPVVSWISDSGT 113
Query: 560 SMASLLLAA 586
S A L +A
Sbjct: 114 SGAYLAASA 122
>UniRef50_Q0BQI3 Cluster: Signal peptide peptidase sppA; n=1;
Granulibacter bethesdensis CGDNIH1|Rep: Signal peptide
peptidase sppA - Granulobacter bethesdensis (strain ATCC
BAA-1260 / CGDNIH1)
Length = 347
Score = 34.3 bits (75), Expect = 3.4
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +2
Query: 428 ESSKKPVHLYINSPGGAVTAGLGIYDTMQYIT--PPIATWCVGQACSMASLLLAAGA 592
+SS K V L INSPGG V G ++D + + P+ T A S ++ A A
Sbjct: 115 DSSVKAVLLEINSPGGTVAGGEALHDALAQLAARKPLVTTMESVAASAGYMIAAPSA 171
>UniRef50_Q3LWK4 Cluster: Clp protease; n=1; Bigelowiella
natans|Rep: Clp protease - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 237
Score = 33.5 bits (73), Expect = 5.9
Identities = 29/118 (24%), Positives = 51/118 (43%), Gaps = 9/118 (7%)
Frame = +2
Query: 317 AYDIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVT---- 484
A D+ S L II + P+ + L+ QLL+ ++ SKK ++ INS G +
Sbjct: 53 APDVPSFLFENSIIFIGMPLTEITIELLFCQLLWQNNKKSKKYINFIINSYGSHSSYTDI 112
Query: 485 -----AGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQP 643
+ L + D +++ + + +G++ A L + R AL NS P
Sbjct: 113 NNIFGSYLTLIDLIEFNSYQTNSIVIGKSFGTALFLFLTSSTNKRIALENSSFSFETP 170
>UniRef50_A3AAH9 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 452
Score = 33.5 bits (73), Expect = 5.9
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = -2
Query: 657 RTPPDG*CIMIRELGSACRIPGAPAASNKDA 565
+TPP G C I S+CR P APAAS +
Sbjct: 70 QTPPSGGCRSISTATSSCRTPRAPAASGSSS 100
>UniRef50_Q9KT38 Cluster: Putative uncharacterized protein VC1067;
n=19; cellular organisms|Rep: Putative uncharacterized
protein VC1067 - Vibrio cholerae
Length = 693
Score = 33.1 bits (72), Expect = 7.9
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +2
Query: 617 NSRIMIHQPSGGVRGQATDIQIQAEEILKLKAQI 718
N + ++QP G VRG + D+ QA E+L LK ++
Sbjct: 278 NPQYALYQPDGSVRGISADVVFQACEMLLLKCEL 311
>UniRef50_A3X7W7 Cluster: Putative uncharacterized protein; n=2;
Roseobacter|Rep: Putative uncharacterized protein -
Roseobacter sp. MED193
Length = 229
Score = 33.1 bits (72), Expect = 7.9
Identities = 13/37 (35%), Positives = 26/37 (70%)
Frame = +2
Query: 599 MRHALPNSRIMIHQPSGGVRGQATDIQIQAEEILKLK 709
+RHA+P M+H P+G + G +D+Q+ A++++ L+
Sbjct: 78 IRHAVPRMTTMMHVPAGAL-GNDSDLQLPADQMVALE 113
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 759,397,881
Number of Sequences: 1657284
Number of extensions: 15712050
Number of successful extensions: 36140
Number of sequences better than 10.0: 170
Number of HSP's better than 10.0 without gapping: 35010
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36078
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 64615845515
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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