Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_M16
         (772 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z50853-1|CAA90705.1|  277|Homo sapiens CLPP protein.                  285   9e-77
BC002956-1|AAH02956.1|  277|Homo sapiens ClpP caseinolytic pepti...   285   9e-77

>Z50853-1|CAA90705.1|  277|Homo sapiens CLPP protein.
          Length = 277

 Score =  285 bits (700), Expect = 9e-77
 Identities = 131/186 (70%), Positives = 157/186 (84%)
 Frame = +2

Query: 215 ITNVYNVTRQINTSLPKLLGMIPIVVEQTGRGERAYDIYSRLLRERIICLMGPINDDISS 394
           + N   + R ++ +  + L +IPIVVEQTGRGERAYDIYSRLLRERI+C+MGPI+D ++S
Sbjct: 38  LQNGLALQRCLHATATRALPLIPIVVEQTGRGERAYDIYSRLLRERIVCVMGPIDDSVAS 97

Query: 395 LIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASL 574
           L++AQLLFLQSES+KKP+H+YINSPGG VTAGL IYDTMQYI  PI TWCVGQA SM SL
Sbjct: 98  LVIAQLLFLQSESNKKPIHMYINSPGGVVTAGLAIYDTMQYILNPICTWCVGQAASMGSL 157

Query: 575 LLAAGAPGMRHALPNSRIMIHQPSGGVRGQATDIQIQAEEILKLKAQINNLYVRHTGLXL 754
           LLAAG PGMRH+LPNSRIMIHQPSGG RGQATDI IQAEEI+KLK Q+ N+Y +HT   L
Sbjct: 158 LLAAGTPGMRHSLPNSRIMIHQPSGGARGQATDIAIQAEEIMKLKKQLYNIYAKHTKQSL 217

Query: 755 EKVQSS 772
           + ++S+
Sbjct: 218 QVIESA 223


>BC002956-1|AAH02956.1|  277|Homo sapiens ClpP caseinolytic
           peptidase, ATP-dependent, proteolytic subunit homolog
           (E. col protein.
          Length = 277

 Score =  285 bits (700), Expect = 9e-77
 Identities = 131/186 (70%), Positives = 157/186 (84%)
 Frame = +2

Query: 215 ITNVYNVTRQINTSLPKLLGMIPIVVEQTGRGERAYDIYSRLLRERIICLMGPINDDISS 394
           + N   + R ++ +  + L +IPIVVEQTGRGERAYDIYSRLLRERI+C+MGPI+D ++S
Sbjct: 38  LQNGLALQRCLHATATRALPLIPIVVEQTGRGERAYDIYSRLLRERIVCVMGPIDDSVAS 97

Query: 395 LIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASL 574
           L++AQLLFLQSES+KKP+H+YINSPGG VTAGL IYDTMQYI  PI TWCVGQA SM SL
Sbjct: 98  LVIAQLLFLQSESNKKPIHMYINSPGGVVTAGLAIYDTMQYILNPICTWCVGQAASMGSL 157

Query: 575 LLAAGAPGMRHALPNSRIMIHQPSGGVRGQATDIQIQAEEILKLKAQINNLYVRHTGLXL 754
           LLAAG PGMRH+LPNSRIMIHQPSGG RGQATDI IQAEEI+KLK Q+ N+Y +HT   L
Sbjct: 158 LLAAGTPGMRHSLPNSRIMIHQPSGGARGQATDIAIQAEEIMKLKKQLYNIYAKHTKQSL 217

Query: 755 EKVQSS 772
           + ++S+
Sbjct: 218 QVIESA 223


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,759,390
Number of Sequences: 237096
Number of extensions: 2348971
Number of successful extensions: 4144
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4005
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4144
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9311505506
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)