Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_M12
         (868 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z78417-2|CAB01692.1|  258|Caenorhabditis elegans Hypothetical pr...   135   3e-32
Z78417-1|CAB01684.1|  255|Caenorhabditis elegans Hypothetical pr...   135   3e-32
Z72508-4|CAA96637.2|  216|Caenorhabditis elegans Hypothetical pr...   100   2e-21
AC006794-3|AAK68503.2|  192|Caenorhabditis elegans Hypothetical ...    30   1.9  
AC006615-4|AAK68233.2|  602|Caenorhabditis elegans Hypothetical ...    30   2.5  
Z66524-5|CAC70104.1|  566|Caenorhabditis elegans Hypothetical pr...    29   3.3  
Z83238-7|CAB05797.1|  313|Caenorhabditis elegans Hypothetical pr...    29   4.3  
Z99281-46|CAB54455.3|  795|Caenorhabditis elegans Hypothetical p...    29   5.7  
U70855-5|AAB09160.2|  886|Caenorhabditis elegans Hypothetical pr...    28   7.5  
U55857-10|AAA98035.2|  895|Caenorhabditis elegans Hypothetical p...    28   7.5  
AC093703-5|AAL00865.1|  725|Caenorhabditis elegans Hypothetical ...    28   7.5  
Z29560-5|CAA82664.1| 1385|Caenorhabditis elegans Hypothetical pr...    28   9.9  
AF016676-5|AAG24100.1|  473|Caenorhabditis elegans Cytochrome p4...    28   9.9  

>Z78417-2|CAB01692.1|  258|Caenorhabditis elegans Hypothetical
           protein C35C5.3b protein.
          Length = 258

 Score =  135 bits (327), Expect = 3e-32
 Identities = 59/145 (40%), Positives = 90/145 (62%)
 Frame = +3

Query: 342 TMNIYYCYSCGYKKVFEDYAGIIQQKYPEISVIGANYDPPGFNMYLSRIIGFGKMLVIMC 521
           T+ I+YC SCGYK+ F+ +    ++KYP + + GAN+ P  +  Y+++ + F KM V++ 
Sbjct: 97  TLRIFYCVSCGYKQAFDQFTTFAKEKYPNMPIEGANFAPVLWKAYVAQALSFVKMAVLVL 156

Query: 522 ILSGVNIFAWLNKPQPAWWSWCLENKLYACMMMFFLANMIEGQLISSGAFEISLNNIPLW 701
           +L G+N F       P        NK+ +CM++F L N++E  LIS+GAFE+ L N  +W
Sbjct: 157 VLGGINPFERFGLGYPQILQHAHGNKMSSCMLVFMLGNLVEQSLISTGAFEVYLGNEQIW 216

Query: 702 SKIETGRIPQPSELFQIIDNTLQFL 776
           SKIE+GR+P P E  Q+ID  L  L
Sbjct: 217 SKIESGRVPSPQEFMQLIDAQLAVL 241


>Z78417-1|CAB01684.1|  255|Caenorhabditis elegans Hypothetical
           protein C35C5.3a protein.
          Length = 255

 Score =  135 bits (327), Expect = 3e-32
 Identities = 59/145 (40%), Positives = 90/145 (62%)
 Frame = +3

Query: 342 TMNIYYCYSCGYKKVFEDYAGIIQQKYPEISVIGANYDPPGFNMYLSRIIGFGKMLVIMC 521
           T+ I+YC SCGYK+ F+ +    ++KYP + + GAN+ P  +  Y+++ + F KM V++ 
Sbjct: 94  TLRIFYCVSCGYKQAFDQFTTFAKEKYPNMPIEGANFAPVLWKAYVAQALSFVKMAVLVL 153

Query: 522 ILSGVNIFAWLNKPQPAWWSWCLENKLYACMMMFFLANMIEGQLISSGAFEISLNNIPLW 701
           +L G+N F       P        NK+ +CM++F L N++E  LIS+GAFE+ L N  +W
Sbjct: 154 VLGGINPFERFGLGYPQILQHAHGNKMSSCMLVFMLGNLVEQSLISTGAFEVYLGNEQIW 213

Query: 702 SKIETGRIPQPSELFQIIDNTLQFL 776
           SKIE+GR+P P E  Q+ID  L  L
Sbjct: 214 SKIESGRVPSPQEFMQLIDAQLAVL 238


>Z72508-4|CAA96637.2|  216|Caenorhabditis elegans Hypothetical
           protein F28H7.4 protein.
          Length = 216

 Score =  100 bits (239), Expect = 2e-21
 Identities = 51/168 (30%), Positives = 87/168 (51%), Gaps = 1/168 (0%)
 Frame = +3

Query: 279 THINADSDEGSISKIGTSVG-HTMNIYYCYSCGYKKVFEDYAGIIQQKYPEISVIGANYD 455
           T +N +S    +   G S     + I YC SCGYK+ F  +    ++KYP + + G N+ 
Sbjct: 49  TVVNENSHSQDVVDSGFSKDLPKLTILYCVSCGYKQAFNQFYEFAKEKYPGLVIEGGNFS 108

Query: 456 PPGFNMYLSRIIGFGKMLVIMCILSGVNIFAWLNKPQPAWWSWCLENKLYACMMMFFLAN 635
           P  +   L++I+G  K+ +I  +++G N F ++    P        N+    +++F + N
Sbjct: 109 PDFWKGCLAQIVGVAKIGLIAIVITGSNPFEYIGFGYPQILQTAHYNRFSYSLLVFMIGN 168

Query: 636 MIEGQLISSGAFEISLNNIPLWSKIETGRIPQPSELFQIIDNTLQFLK 779
           + E  L S+GAFEI L +  +WSKI   R+P   E   +ID  L+ ++
Sbjct: 169 LFESTLSSTGAFEIFLGDKQIWSKISKERVPTQEEFLNLIDLQLKTIR 216


>AC006794-3|AAK68503.2|  192|Caenorhabditis elegans Hypothetical
           protein Y50D4A.2 protein.
          Length = 192

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = -3

Query: 446 SSNDRNLWVFLLYNSCIVFKYLFVATRITVIDIHCMPDT 330
           S N RNL +  +    + F  LF+   ++ I  +C+PDT
Sbjct: 99  SENSRNLKIDTVVKVFMQFSALFLLRHVSAITAYCIPDT 137


>AC006615-4|AAK68233.2|  602|Caenorhabditis elegans Hypothetical
           protein C36B7.6 protein.
          Length = 602

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = +3

Query: 510 VIMCILSGVNIFAWLNKPQPAWWSWCLENKLYACMMMFFLANM 638
           V+  +L G  +++ +   Q  W+SW L N LY  ++MF    M
Sbjct: 452 VLFPLLVGYAVYSIIYVEQRGWYSWVL-NMLYGYLLMFGFITM 493


>Z66524-5|CAC70104.1|  566|Caenorhabditis elegans Hypothetical
           protein T13H5.8 protein.
          Length = 566

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
 Frame = +3

Query: 480 SRIIGFGKMLVIMCILSGVNIFAWLNKPQPAWWSWCLE---NKLYACMMMFFLANMIEGQ 650
           S+ + +  +L++  ++ G  I++ L  P  +W SW LE   N +YA   +F L  +    
Sbjct: 399 SQAMKYLSILLVPLVIGGA-IYSLLYVPHKSWRSWILETSANGVYAFGFLFMLPQLFVNY 457

Query: 651 LISSGA 668
            + S A
Sbjct: 458 KLKSVA 463


>Z83238-7|CAB05797.1|  313|Caenorhabditis elegans Hypothetical
           protein T08G3.8 protein.
          Length = 313

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 15/49 (30%), Positives = 23/49 (46%)
 Frame = +1

Query: 121 KNKYSVVKRNNHCESNDLHPFIY*IRLEKISVCQTICFT*TRCYSFVLY 267
           K  Y  + R N C S DLHP ++     +  + Q  CF    C  F+++
Sbjct: 34  KLSYYFLYRKNKCYSTDLHPVLF----RQFMIMQIACFF-NVCIKFLIF 77


>Z99281-46|CAB54455.3|  795|Caenorhabditis elegans Hypothetical
           protein Y57G11C.32 protein.
          Length = 795

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 12/51 (23%), Positives = 27/51 (52%)
 Frame = +3

Query: 153 PLRKQRSSPIYLLNSVRKDISMSNNMFYLNAMLLVCTLLFTLTHINADSDE 305
           P    + +PI+  + ++ D+SM N++ +     L+ +  F  + +  +SDE
Sbjct: 158 PKTPSKFAPIFTESILQLDVSMQNDLLFFLEQHLISSAEFIFSELPLESDE 208


>U70855-5|AAB09160.2|  886|Caenorhabditis elegans Hypothetical
           protein K08F11.2 protein.
          Length = 886

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 15/36 (41%), Positives = 23/36 (63%)
 Frame = +1

Query: 364 ILVATKRYLKTMQELYNKNTQRFLSLELTMTHLVLT 471
           +L A KR  K  +E  N NT+R  SL+L ++++ LT
Sbjct: 14  LLNARKRRWKKDEEDENSNTERNASLDLNLSNVELT 49


>U55857-10|AAA98035.2|  895|Caenorhabditis elegans Hypothetical
           protein K08D10.1 protein.
          Length = 895

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 15/36 (41%), Positives = 23/36 (63%)
 Frame = +1

Query: 364 ILVATKRYLKTMQELYNKNTQRFLSLELTMTHLVLT 471
           +L A KR  K  +E  N NT+R  SL+L ++++ LT
Sbjct: 14  LLNARKRRWKKDEEDENSNTERNASLDLNLSNVELT 49


>AC093703-5|AAL00865.1|  725|Caenorhabditis elegans Hypothetical
           protein Y20F4.5 protein.
          Length = 725

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 15/36 (41%), Positives = 23/36 (63%)
 Frame = +1

Query: 364 ILVATKRYLKTMQELYNKNTQRFLSLELTMTHLVLT 471
           +L A KR  K  +E  N NT+R  SL+L ++++ LT
Sbjct: 14  LLNARKRRWKKDEEDENSNTERNASLDLNLSNVELT 49


>Z29560-5|CAA82664.1| 1385|Caenorhabditis elegans Hypothetical protein
            K03H1.5 protein.
          Length = 1385

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
 Frame = +3

Query: 567  PAWWSWCLENKL-YACMMMFFLANMIEGQLI 656
            P WW+WC +  L YA   M  L ++    LI
Sbjct: 1230 PGWWAWCRDRNLEYALKWMTALLSIFGISLI 1260


>AF016676-5|AAG24100.1|  473|Caenorhabditis elegans Cytochrome p450
           family protein 33C7 protein.
          Length = 473

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 14/51 (27%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
 Frame = -1

Query: 718 PVSILDQSGMLLRDISKAPEDIS---CPSIIFAKKNIIMHAYSLFSRHQLH 575
           P   +D+SG L++     P  I    CP    A+  + +   + F+R+Q+H
Sbjct: 413 PERFIDESGKLIKVDELVPFSIGKRQCPGEGLARMELFLFIANFFNRYQVH 463


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,489,230
Number of Sequences: 27780
Number of extensions: 464429
Number of successful extensions: 1220
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1175
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1220
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2171433726
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)