Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_M11
         (519 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P61165 Cluster: UPF0197 protein C11orf10; n=38; Eukaryo...    94   1e-18
UniRef50_Q32P84 Cluster: UPF0197 protein C11orf10 homolog; n=2; ...    94   2e-18
UniRef50_Q965T1 Cluster: UPF0197 protein Y57E12AM.1; n=2; Caenor...    51   1e-05
UniRef50_UPI0000E4641D Cluster: PREDICTED: similar to conserved ...    43   0.004
UniRef50_Q8LCF2 Cluster: Putative uncharacterized protein; n=6; ...    39   0.079
UniRef50_A1YWC3 Cluster: NADH-ubiquinone oxidoreductase chain 2;...    33   5.2  
UniRef50_UPI000051ACD2 Cluster: PREDICTED: similar to NAT9; n=1;...    32   6.8  
UniRef50_A2FDS4 Cluster: Putative uncharacterized protein; n=1; ...    32   6.8  
UniRef50_Q27911 Cluster: Homeodomain protein PmHox1; n=2; Polyan...    32   9.0  

>UniRef50_P61165 Cluster: UPF0197 protein C11orf10; n=38;
           Eukaryota|Rep: UPF0197 protein C11orf10 - Homo sapiens
           (Human)
          Length = 79

 Score = 94.3 bits (224), Expect = 1e-18
 Identities = 43/79 (54%), Positives = 52/79 (65%)
 Frame = +2

Query: 50  LEIESMXRYTSPINPAVFPHXXXXXXXXXXXXXAWFFVYEVTSTKASRDMFKELLLSLVA 229
           +E+E+M RYTSP+NPAVFPH             AWFFVYEVTSTK +RD++KELL+SLVA
Sbjct: 1   MELEAMSRYTSPVNPAVFPHLTVVLLAIGMFFTAWFFVYEVTSTKYTRDIYKELLISLVA 60

Query: 230 AXXXXXXXXXXXXWVGIYV 286
           +            WVGIYV
Sbjct: 61  SLFMGFGVLFLLLWVGIYV 79


>UniRef50_Q32P84 Cluster: UPF0197 protein C11orf10 homolog; n=2; Bos
           taurus|Rep: UPF0197 protein C11orf10 homolog - Bos
           taurus (Bovine)
          Length = 79

 Score = 93.9 bits (223), Expect = 2e-18
 Identities = 42/79 (53%), Positives = 52/79 (65%)
 Frame = +2

Query: 50  LEIESMXRYTSPINPAVFPHXXXXXXXXXXXXXAWFFVYEVTSTKASRDMFKELLLSLVA 229
           +E+E+M RYTSP+NPAVFPH             AWFFVYEVTSTK +RD++KELL+SLVA
Sbjct: 1   MELEAMSRYTSPVNPAVFPHLTVVLLAIGMFFTAWFFVYEVTSTKYTRDIYKELLISLVA 60

Query: 230 AXXXXXXXXXXXXWVGIYV 286
           +            WVGIY+
Sbjct: 61  SLFMGFGVLFLLLWVGIYI 79


>UniRef50_Q965T1 Cluster: UPF0197 protein Y57E12AM.1; n=2;
           Caenorhabditis|Rep: UPF0197 protein Y57E12AM.1 -
           Caenorhabditis elegans
          Length = 79

 Score = 51.2 bits (117), Expect = 1e-05
 Identities = 26/79 (32%), Positives = 39/79 (49%)
 Frame = +2

Query: 50  LEIESMXRYTSPINPAVFPHXXXXXXXXXXXXXAWFFVYEVTSTKASRDMFKELLLSLVA 229
           ++I  M RYT+P+N A  P              A F + +VTSTK +R++ KEL ++  +
Sbjct: 1   MDISKMNRYTAPVNFASLPLLTTFLCGVGLLLLATFTMIQVTSTKYNRNLLKELFIAATS 60

Query: 230 AXXXXXXXXXXXXWVGIYV 286
           +            WVGIYV
Sbjct: 61  SVFLGFGSVFLLLWVGIYV 79


>UniRef50_UPI0000E4641D Cluster: PREDICTED: similar to conserved
           hypothetical protein; n=1; Strongylocentrotus
           purpuratus|Rep: PREDICTED: similar to conserved
           hypothetical protein - Strongylocentrotus purpuratus
          Length = 148

 Score = 43.2 bits (97), Expect = 0.004
 Identities = 18/36 (50%), Positives = 20/36 (55%)
 Frame = +2

Query: 56  IESMXRYTSPINPAVFPHXXXXXXXXXXXXXAWFFV 163
           IESM RY SP+NPAV+PH             AWF V
Sbjct: 25  IESMTRYVSPVNPAVYPHLTLILLTIGIFFMAWFLV 60


>UniRef50_Q8LCF2 Cluster: Putative uncharacterized protein; n=6;
           Magnoliophyta|Rep: Putative uncharacterized protein -
           Arabidopsis thaliana (Mouse-ear cress)
          Length = 76

 Score = 38.7 bits (86), Expect = 0.079
 Identities = 22/69 (31%), Positives = 31/69 (44%)
 Frame = +2

Query: 80  SPINPAVFPHXXXXXXXXXXXXXAWFFVYEVTSTKASRDMFKELLLSLVAAXXXXXXXXX 259
           SPI  A++P              A FF+YE TS++ +R + KEL  S VA+         
Sbjct: 8   SPIPVALYPTLSVFTLAIGLVITAIFFIYEATSSRKNRSVGKELATSAVASVFLGFGSLF 67

Query: 260 XXXWVGIYV 286
                G+YV
Sbjct: 68  LLLASGVYV 76


>UniRef50_A1YWC3 Cluster: NADH-ubiquinone oxidoreductase chain 2;
           n=1; Cephalothrix rufifrons|Rep: NADH-ubiquinone
           oxidoreductase chain 2 - Cephalothrix rufifrons
          Length = 345

 Score = 32.7 bits (71), Expect = 5.2
 Identities = 18/58 (31%), Positives = 28/58 (48%)
 Frame = +3

Query: 174 QVLKPQEICSKSYFYHWWPPYFLVSVFCSCCYG*GFMCDINVRYNLSYE*CNTIPLLM 347
           Q L P  IC   +F  W+     +SVFCS   G G +  + +R  ++Y   N +  +M
Sbjct: 135 QKLAPLFICFWFFFDSWFFVVLFLSVFCSIIGGLGGINQVQIRVLMAYSSINHLGWMM 192


>UniRef50_UPI000051ACD2 Cluster: PREDICTED: similar to NAT9; n=1;
           Apis mellifera|Rep: PREDICTED: similar to NAT9 - Apis
           mellifera
          Length = 267

 Score = 32.3 bits (70), Expect = 6.8
 Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
 Frame = +1

Query: 94  GSFSTSNLFVARNRN-ILHGLVLRLRSYKY*SLKRYVQRVTFIIGGRLIFWFRYFVLVAM 270
           GSF T   F  +  N +     ++L SY +  LKRY     FI G  L  W+++  +   
Sbjct: 172 GSFYTGAEFTQQTYNRMFKNNTMQLESYNWAQLKRYAIYGCFIAGPLLHGWYKWLDMFYK 231

Query: 271 GRDLCVI 291
           G+ +  I
Sbjct: 232 GKTMKTI 238


>UniRef50_A2FDS4 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 489

 Score = 32.3 bits (70), Expect = 6.8
 Identities = 13/47 (27%), Positives = 24/47 (51%)
 Frame = -1

Query: 327 YIIHNLNYTLH*YHT*IPTHSNKNKIPKPENKAATNDKSNSLNISLE 187
           ++ H+    +H  +  +P H  +N+IPKP N    N   + LN+  +
Sbjct: 51  HVYHSYPILMHQIYDGLPEHEQQNQIPKPNNPEFKNIFLHKLNLGCQ 97


>UniRef50_Q27911 Cluster: Homeodomain protein PmHox1; n=2;
           Polyandrocarpa misakiensis|Rep: Homeodomain protein
           PmHox1 - Polyandrocarpa misakiensis
          Length = 167

 Score = 31.9 bits (69), Expect = 9.0
 Identities = 16/54 (29%), Positives = 27/54 (50%)
 Frame = -1

Query: 249 PKPENKAATNDKSNSLNISLEALVLVTS*TKNQAVKNIPIPSNKKVRCGKTAGF 88
           P P+ + +TN+++N+ + +    +  T   KN   KN   PS K  +    AGF
Sbjct: 54  PAPKTEDSTNNENNNNSSAKTTSLEATKLEKNDTYKNYSSPSQKSQQSPTAAGF 107


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 360,357,681
Number of Sequences: 1657284
Number of extensions: 6479705
Number of successful extensions: 14413
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14083
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14410
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32201017387
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)