Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_F_M09
(594 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_12473| Best HMM Match : No HMM Matches (HMM E-Value=.) 132 3e-31
SB_51267| Best HMM Match : Thiolase_N (HMM E-Value=2.2e-35) 78 6e-15
SB_30176| Best HMM Match : No HMM Matches (HMM E-Value=.) 67 9e-12
SB_25136| Best HMM Match : Thiolase_N (HMM E-Value=4.4e-09) 35 0.043
SB_57005| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.93
SB_44112| Best HMM Match : PA14 (HMM E-Value=5e-05) 30 1.6
SB_42687| Best HMM Match : UPF0262 (HMM E-Value=2.1) 28 4.9
SB_36506| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9
SB_7259| Best HMM Match : ResIII (HMM E-Value=0.21) 28 4.9
SB_50233| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9
SB_27146| Best HMM Match : LIM (HMM E-Value=9.7) 28 4.9
SB_21674| Best HMM Match : LIM (HMM E-Value=0.44) 28 4.9
SB_55131| Best HMM Match : fn3 (HMM E-Value=0.0083) 28 6.5
SB_27914| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_37849| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
SB_5900| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
SB_53084| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
SB_39998| Best HMM Match : Peptidase_C1 (HMM E-Value=0) 27 8.6
SB_5118| Best HMM Match : zf-C4_Topoisom (HMM E-Value=3.5) 27 8.6
>SB_12473| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 387
Score = 132 bits (318), Expect = 3e-31
Identities = 66/168 (39%), Positives = 98/168 (58%), Gaps = 1/168 (0%)
Frame = +1
Query: 67 AGIPKXXIKXVYIGNVCSANLGQAPAXQAVIFAGLPKSTICTTVNKVCASGMKSIMLAAQ 246
A I + V +G V +A GQ PA QA I AG+P VN +C SG+K++ L Q
Sbjct: 47 ASISPCDVSEVILGQVLTAGQGQGPARQAAIHAGIPACVPAYGVNMLCGSGLKAVALGYQ 106
Query: 247 GLQTGAQDIILAGGMESMSNVPFYLK-RGETSYGGMQLVDGIVFDGLTDVYNKFHMGNCA 423
+ G +I++AGG ESMS P R +G M L+D ++ DGL D +N +HMG A
Sbjct: 107 AVAMGDSNIVVAGGQESMSQAPHCCHMRPALKFGDMTLIDTMLKDGLMDSFNNYHMGITA 166
Query: 424 ENTAKKLQITRQDQDEYAVNSYKRSAAAYEAKAFVDELVPVPVPQKRG 567
EN AK+ +++R++QD +A+ S +R+ A +A F DE+V V + + G
Sbjct: 167 ENVAKQWEVSREEQDNFALTSQQRTETAQKAGYFSDEIVTVSIKTRAG 214
>SB_51267| Best HMM Match : Thiolase_N (HMM E-Value=2.2e-35)
Length = 415
Score = 77.8 bits (183), Expect = 6e-15
Identities = 34/62 (54%), Positives = 48/62 (77%), Gaps = 1/62 (1%)
Frame = +1
Query: 412 GNCAENTAKKLQITRQDQDEYAVNSYKRSAAAYEAKAFVDELVPVPVPQKRGAP-VIFAE 588
G CAEN A K ITR++QD+YA++SY+R+AAA++A F E+VPV +PQK+G P ++F E
Sbjct: 59 GVCAENAASKYNITREEQDDYAIHSYRRTAAAWDAGKFKQEVVPVNIPQKKGKPDIVFEE 118
Query: 589 XE 594
E
Sbjct: 119 DE 120
Score = 60.5 bits (140), Expect = 1e-09
Identities = 34/60 (56%), Positives = 39/60 (65%), Gaps = 11/60 (18%)
Frame = +1
Query: 127 LGQAPAXQAVIFAG-----------LPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQDI 273
+GQAPA QA + AG LP ST CTT+NKVCASGMKSIM AAQ L G+Q +
Sbjct: 1 MGQAPARQAALGAGTRXVTSIRDQALPISTPCTTINKVCASGMKSIMAAAQSLMCGSQGV 60
>SB_30176| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1012
Score = 67.3 bits (157), Expect = 9e-12
Identities = 39/83 (46%), Positives = 54/83 (65%)
Frame = +1
Query: 346 GMQLVDGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAVNSYKRSAAAYEAKAF 525
G Q+ D + + GLTD+ MG AEN A+K ITR++ D++A+ S +R AAA+E+ AF
Sbjct: 799 GAQMEDTL-WQGLTDMLPGLPMGITAENLAEKYNITREECDQFALLSQQRWAAAHESGAF 857
Query: 526 VDELVPVPVPQKRGAPVIFAEXE 594
E+VPVPV K+G P FA E
Sbjct: 858 TAEIVPVPVKGKKG-PEQFAVDE 879
>SB_25136| Best HMM Match : Thiolase_N (HMM E-Value=4.4e-09)
Length = 162
Score = 35.1 bits (77), Expect = 0.043
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +1
Query: 409 MGNCAENTAKKLQITRQDQDEYAVNSYKRSAAAYEAKAFVDEL 537
MG+ A+ A ++RQ+QDEYA+ S+ + A +A D L
Sbjct: 13 MGHSADRLASAFHVSRQEQDEYALRSHTLAHQATQAGKLTDVL 55
>SB_57005| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 251
Score = 30.7 bits (66), Expect = 0.93
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = -1
Query: 354 LHSSIRSFTSLQIKRYI*HRFHPTSKYYILGSSL*TLCCQ-HYRFHARGTYFVYSCTYGT 178
+HS+ R+ + RY H T + S+ TLC Q H R+ + T+ +YS T+
Sbjct: 102 MHSNTRTLCTKTHARYALKHTHTT-----MHSNTRTLCTQTHARYALKHTHTMYSNTHTL 156
Query: 177 FWQTCKYYSL 148
QT +Y+L
Sbjct: 157 CTQTHAHYAL 166
>SB_44112| Best HMM Match : PA14 (HMM E-Value=5e-05)
Length = 1433
Score = 29.9 bits (64), Expect = 1.6
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 7/79 (8%)
Frame = +1
Query: 361 DGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAVNSYKRSAAAYE-------AK 519
DG+VFD ++ + M C+ N K + +Q E+ +Y R +A A
Sbjct: 1214 DGVVFDAAIELAHPSDMWVCSTN--KMGALVQQRLIEHHRKNYPRLSATIRFDPDPSVAH 1271
Query: 520 AFVDELVPVPVPQKRGAPV 576
+ + PVPVP KRG V
Sbjct: 1272 RYRKQERPVPVPGKRGEKV 1290
>SB_42687| Best HMM Match : UPF0262 (HMM E-Value=2.1)
Length = 908
Score = 28.3 bits (60), Expect = 4.9
Identities = 23/80 (28%), Positives = 34/80 (42%), Gaps = 7/80 (8%)
Frame = +1
Query: 361 DGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAVNSYKRSAAAYE-------AK 519
DG+ FD + + +M C+ N L +Q E+ +Y R A A
Sbjct: 564 DGVAFDAAIEQAHSSYMWVCSTNKIGAL--VQQRLIEHHRKNYPRLPATIRFDPDPSVAH 621
Query: 520 AFVDELVPVPVPQKRGAPVI 579
+ + PVPVP KRG V+
Sbjct: 622 CYRKQGRPVPVPGKRGEKVV 641
>SB_36506| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 28.3 bits (60), Expect = 4.9
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Frame = +3
Query: 105 WQCLFCKFGPSTCKXSCNICRFAKKY-HMYNCK-QSMCLWHEIYNVGSTR 248
W+C K PS + + F KKY H + +S LW+ Y + + R
Sbjct: 80 WECEHVKPVPSDVRSKMRLSGFYKKYLHAFGIPVRSNTLWYRTYAMSTDR 129
>SB_7259| Best HMM Match : ResIII (HMM E-Value=0.21)
Length = 956
Score = 28.3 bits (60), Expect = 4.9
Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 7/79 (8%)
Frame = +1
Query: 361 DGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAVNSYKRSAAAYE-------AK 519
DG+ FD + D + M C+ N K + +Q E+ +Y R A A
Sbjct: 735 DGVAFDAVIDQAHPSDMWVCSTN--KMGALVQQRLVEHHRKNYPRLPATIRFDPDPSVAH 792
Query: 520 AFVDELVPVPVPQKRGAPV 576
+ + PVPVP KRG V
Sbjct: 793 RYRKQGRPVPVPGKRGEKV 811
>SB_50233| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 967
Score = 28.3 bits (60), Expect = 4.9
Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 7/79 (8%)
Frame = +1
Query: 361 DGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAVNSYKRSAAAYE-------AK 519
DG+ FD + + M C+ N K + +Q E+ +Y R A A
Sbjct: 707 DGVAFDAAIEQAHPSDMWVCSTN--KMGALVQQQLVEHHRKNYPRLPAIIRFDPDPSVAH 764
Query: 520 AFVDELVPVPVPQKRGAPV 576
+ + PVPVP KRGA V
Sbjct: 765 RYRKQGRPVPVPGKRGAKV 783
>SB_27146| Best HMM Match : LIM (HMM E-Value=9.7)
Length = 296
Score = 28.3 bits (60), Expect = 4.9
Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 7/79 (8%)
Frame = +1
Query: 361 DGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAVNSYKRSAAAYE-------AK 519
DG+ FD + D + M C+ N K + +Q E+ +Y R A A
Sbjct: 102 DGVAFDAVIDQAHPSDMWVCSTN--KMGALVQQRLVEHHRKNYPRLPATIRFDPDPSVAH 159
Query: 520 AFVDELVPVPVPQKRGAPV 576
+ + PVPVP KRG V
Sbjct: 160 RYRKQGRPVPVPGKRGEKV 178
>SB_21674| Best HMM Match : LIM (HMM E-Value=0.44)
Length = 885
Score = 28.3 bits (60), Expect = 4.9
Identities = 23/79 (29%), Positives = 34/79 (43%), Gaps = 7/79 (8%)
Frame = +1
Query: 361 DGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAVNSYKRSAAAYE-------AK 519
DG+ FD + ++ M C+ N K + +Q E+ + Y R A A
Sbjct: 664 DGVAFDAAIEQAHRSDMWVCSTN--KMGALVQQRLVEHHMKKYPRLPATIRFDPDPSVAH 721
Query: 520 AFVDELVPVPVPQKRGAPV 576
+ + PVPVP KRG V
Sbjct: 722 RYRKQGRPVPVPGKRGEKV 740
>SB_55131| Best HMM Match : fn3 (HMM E-Value=0.0083)
Length = 1266
Score = 27.9 bits (59), Expect = 6.5
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = -2
Query: 389 SVSPSNTIPSTNCIPPYEVSP 327
+++PSNT+P TNC P E +P
Sbjct: 928 ALNPSNTVP-TNCCPSGETTP 947
>SB_27914| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 27.9 bits (59), Expect = 6.5
Identities = 19/68 (27%), Positives = 29/68 (42%)
Frame = +1
Query: 160 FAGLPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQDIILAGGMESMSNVPFYLKRGETS 339
+ G PKS +CT+VN+V G+ + G + GG+ F + G
Sbjct: 102 YRGFPKS-VCTSVNEVAVHGIPNSRCLQNGDLLSVDISLFYGGVHGDLCETFLV--GNVD 158
Query: 340 YGGMQLVD 363
G +LVD
Sbjct: 159 ESGRRLVD 166
>SB_37849| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1213
Score = 27.5 bits (58), Expect = 8.6
Identities = 24/79 (30%), Positives = 33/79 (41%), Gaps = 7/79 (8%)
Frame = +1
Query: 361 DGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAVNSYKRSAAAYE-------AK 519
DG+ FD + + M C+ N K + +Q EY +Y R A A
Sbjct: 946 DGVAFDAAIERAHPSDMWVCSTN--KMGALVQQRLVEYHRKNYPRLPATIRFDPDPSVAH 1003
Query: 520 AFVDELVPVPVPQKRGAPV 576
+ + PVPVP KRG V
Sbjct: 1004 RYRKQGRPVPVPGKRGEKV 1022
>SB_5900| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1023
Score = 27.5 bits (58), Expect = 8.6
Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 7/79 (8%)
Frame = +1
Query: 361 DGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAVNSYKRSAAAYE-------AK 519
DG+ FD + + M C+ N K + +Q E+ +Y R AA A
Sbjct: 893 DGVAFDAAIERAHSSDMWVCSTN--KMGALVQQRLVEHHRKNYPRLPAAIRFDPDPSVAH 950
Query: 520 AFVDELVPVPVPQKRGAPV 576
+ + PVPVP KRG V
Sbjct: 951 RYRKQGRPVPVPGKRGEKV 969
>SB_53084| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 936
Score = 27.5 bits (58), Expect = 8.6
Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = -1
Query: 354 LHSSIRSFTSLQIKRYI*HRFHPTSKYYILGSSL*TL-CCQHYRFHARGTYFVY 196
+H S+ +FT+L I R+ + L S L L Q Y FHAR F Y
Sbjct: 763 IHESVATFTALMIARHC-FSLEDVIYHVALPSLLAALPSVQLYGFHARSAIFRY 815
>SB_39998| Best HMM Match : Peptidase_C1 (HMM E-Value=0)
Length = 1220
Score = 27.5 bits (58), Expect = 8.6
Identities = 24/79 (30%), Positives = 33/79 (41%), Gaps = 7/79 (8%)
Frame = +1
Query: 361 DGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAVNSYKRSAAAYE-------AK 519
DG+ FD + + M C+ N K +Q E+ +Y RS A A
Sbjct: 1064 DGVAFDAAIEQAHPSDMWVCSTN--KMGAFVQQRLVEHHRKNYPRSPATIRFDPDPSVAH 1121
Query: 520 AFVDELVPVPVPQKRGAPV 576
+ + PVPVP KRG V
Sbjct: 1122 RYRKQGRPVPVPGKRGEKV 1140
>SB_5118| Best HMM Match : zf-C4_Topoisom (HMM E-Value=3.5)
Length = 425
Score = 27.5 bits (58), Expect = 8.6
Identities = 24/79 (30%), Positives = 33/79 (41%), Gaps = 7/79 (8%)
Frame = +1
Query: 361 DGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAVNSYKRSAAAYE-------AK 519
DG+ FD + + M C+ N K +Q E+ +Y RS A A
Sbjct: 223 DGVAFDAAIEQAHPSDMWVCSTN--KMGAFVQQRLVEHHRKNYPRSPATIRFDPDPSVAH 280
Query: 520 AFVDELVPVPVPQKRGAPV 576
+ + PVPVP KRG V
Sbjct: 281 RYRKQGRPVPVPGKRGEKV 299
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,284,617
Number of Sequences: 59808
Number of extensions: 341629
Number of successful extensions: 1032
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 938
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1024
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1427401750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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