Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_M09
         (594 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            24   3.2  
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    23   5.6  
AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dp...    23   7.4  
AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical prot...    23   9.8  

>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 24.2 bits (50), Expect = 3.2
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = -1

Query: 405 KFVVHICEPIKHYSIN*LHSSIRSFTSLQIKRYI*H 298
           + ++HI +P+   S N   S+   +T   IKRY+ H
Sbjct: 727 RLLLHIRDPLGGISSNKTDSTETVYTLNDIKRYLVH 762


>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1209

 Score = 23.4 bits (48), Expect = 5.6
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +1

Query: 106 GNVCSANLGQAPAXQAVIFAGLPKSTICTT 195
           GN  SAN+  A   Q++I AG  +  I  T
Sbjct: 67  GNAASANVAVADRQQSLILAGGRRQRIMWT 96


>AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dpp
           protein.
          Length = 474

 Score = 23.0 bits (47), Expect = 7.4
 Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
 Frame = -1

Query: 177 FWQTCKYYSLXCRCLAQI--CRTNIANVDXFYXXFRNTGXF 61
           +W +  YY L CR + ++  C      VD F     N+  F
Sbjct: 279 YWASIAYYELNCR-VGEVFHCTNTSIIVDGFTNPSNNSDRF 318


>AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical protein
           protein.
          Length = 278

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 10/13 (76%), Positives = 10/13 (76%)
 Frame = +1

Query: 538 VPVPVPQKRGAPV 576
           VPVPV QK G PV
Sbjct: 166 VPVPVFQKVGVPV 178


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 564,073
Number of Sequences: 2352
Number of extensions: 12196
Number of successful extensions: 15
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57188952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)