Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_F_M09
(594 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41105-4|AAA82397.2| 407|Caenorhabditis elegans 3-ketoacyl-coa ... 218 3e-57
U41105-5|AAA82398.1| 390|Caenorhabditis elegans Hypothetical pr... 160 6e-40
U41105-8|AAA82403.1| 460|Caenorhabditis elegans Hypothetical pr... 107 8e-24
Z81546-11|CAB04455.2| 394|Caenorhabditis elegans Hypothetical p... 99 1e-21
M77697-2|AAA27897.2| 448|Caenorhabditis elegans Hypothetical pr... 52 3e-07
D86473-1|BAA20377.1| 412|Caenorhabditis elegans 3-keto-acyl-CoA... 36 0.022
AL023847-7|CAA19548.1| 412|Caenorhabditis elegans Hypothetical ... 36 0.022
AF098499-2|AAC67396.1| 155|Caenorhabditis elegans Hypothetical ... 29 1.9
AF000261-10|AAB52930.1| 639|Caenorhabditis elegans Hypothetical... 29 2.5
Z81545-10|CAB04448.1| 170|Caenorhabditis elegans Hypothetical p... 28 5.8
U56965-9|AAB52662.2| 265|Caenorhabditis elegans Hypothetical pr... 28 5.8
AL031627-25|CAA20971.1| 170|Caenorhabditis elegans Hypothetical... 28 5.8
>U41105-4|AAA82397.2| 407|Caenorhabditis elegans 3-ketoacyl-coa
thiolase protein 1 protein.
Length = 407
Score = 218 bits (532), Expect = 3e-57
Identities = 101/179 (56%), Positives = 130/179 (72%)
Frame = +1
Query: 58 IEXAGIPKXXIKXVYIGNVCSANLGQAPAXQAVIFAGLPKSTICTTVNKVCASGMKSIML 237
+E + I+ V++G VC AN GQAPA QA + AGL S TTVNKVC+SG+K+I+L
Sbjct: 58 LERGAVKPSSIQEVFLGQVCQANAGQAPARQAALGAGLDLSVAVTTVNKVCSSGLKAIIL 117
Query: 238 AAQGLQTGAQDIILAGGMESMSNVPFYLKRGETSYGGMQLVDGIVFDGLTDVYNKFHMGN 417
AAQ +QTG QD + GGMESMS VPFY++RGE YGG Q++DGIV DGLTD Y+K HMGN
Sbjct: 118 AAQQIQTGHQDFAIGGGMESMSQVPFYVQRGEIPYGGFQVIDGIVKDGLTDAYDKVHMGN 177
Query: 418 CAENTAKKLQITRQDQDEYAVNSYKRSAAAYEAKAFVDELVPVPVPQKRGAPVIFAEXE 594
C E T+K++ ITR+DQDEYA+NSYK+SA A+E E+VPV V K+G ++ + E
Sbjct: 178 CGEKTSKEMGITRKDQDEYAINSYKKSAKAWENGNIGPEVVPVNVKSKKGVTIVDKDEE 236
>U41105-5|AAA82398.1| 390|Caenorhabditis elegans Hypothetical
protein T02G5.7 protein.
Length = 390
Score = 160 bits (389), Expect = 6e-40
Identities = 85/198 (42%), Positives = 115/198 (58%)
Frame = +1
Query: 1 GRFSXFXXXXXXXXXXXXXIEXAGIPKXXIKXVYIGNVCSANLGQAPAXQAVIFAGLPKS 180
G F+ F IE +G+ I+ V G V A LGQ Q + AGLP +
Sbjct: 21 GSFANFGAVELGTVAAKAAIERSGVAPEKIEEVIGGCVLPAGLGQNVTRQISLSAGLPVT 80
Query: 181 TICTTVNKVCASGMKSIMLAAQGLQTGAQDIILAGGMESMSNVPFYLKRGETSYGGMQLV 360
T TVNKVC+S MK+++ AA ++ G D IL G E+MS VPFY+ RGE +GG+Q+
Sbjct: 81 TQAVTVNKVCSSSMKALVTAAVEIKAGYYDTILVVGTENMSQVPFYVPRGEIPFGGIQMT 140
Query: 361 DGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAVNSYKRSAAAYEAKAFVDELV 540
DGI DGL D+ K MG CAE T K ITR++QD YA+ SYK+++ A+ ++ F +E+V
Sbjct: 141 DGISKDGLEDIKEKGPMGLCAEKTVKDYGITREEQDAYAIESYKKASNAWSSEKFSEEVV 200
Query: 541 PVPVPQKRGAPVIFAEXE 594
PV V R VI + E
Sbjct: 201 PVSVKTSRSEVVITEDEE 218
>U41105-8|AAA82403.1| 460|Caenorhabditis elegans Hypothetical
protein T02G5.4 protein.
Length = 460
Score = 107 bits (256), Expect = 8e-24
Identities = 56/102 (54%), Positives = 71/102 (69%)
Frame = +1
Query: 97 VYIGNVCSANLGQAPAXQAVIFAGLPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQDII 276
V++G VC AN GQA A QA + AGL S TTVNK +SGMK+I+LAAQ +QTG QD+
Sbjct: 151 VFLGQVCHANAGQASARQAALGAGLDLSVAVTTVNKGWSSGMKAIILAAQQIQTGHQDLA 210
Query: 277 LAGGMESMSNVPFYLKRGETSYGGMQLVDGIVFDGLTDVYNK 402
+ GGMESMS VPF+L R E S Q V+ V DG++D ++K
Sbjct: 211 IGGGMESMSQVPFFLARVEQSSNKYQ-VEQTVQDGISDFFDK 251
>Z81546-11|CAB04455.2| 394|Caenorhabditis elegans Hypothetical
protein F53A2.7 protein.
Length = 394
Score = 99 bits (238), Expect = 1e-21
Identities = 55/173 (31%), Positives = 98/173 (56%), Gaps = 3/173 (1%)
Frame = +1
Query: 58 IEXAGIPKXXIKXVYIGNV-CSANLGQAPAXQAVIFAGLPKSTICTTVNKVCASGMKSIM 234
++ A + + V GNV S+ G + + +G+P++ TVN++C SG ++++
Sbjct: 40 LKHANVGADAVDHVIFGNVVASSRDGIYLSRHIGLKSGVPQNVGALTVNRLCGSGFQAVV 99
Query: 235 LAAQGLQTGAQDIILAGGMESMSNVPFYLK--RGETSYGGMQLVDGIVFDGLTDVYNKFH 408
AAQ ++ G +I+LAGG E+MS VPF ++ R T+ G + +++D L+D Y K
Sbjct: 100 NAAQAIKLGESNIVLAGGTENMSMVPFAVRDIRFGTALGKKYEFEDMLWDSLSDPYAKLA 159
Query: 409 MGNCAENTAKKLQITRQDQDEYAVNSYKRSAAAYEAKAFVDELVPVPVPQKRG 567
MG AE + ++TRQ+ DE+A+ S A EA + +E+V + + ++G
Sbjct: 160 MGQTAEKLGAQYKVTRQEADEFALRSQTLWKKAQEAGVYKNEIVGITIKGRKG 212
>M77697-2|AAA27897.2| 448|Caenorhabditis elegans Hypothetical
protein B0303.3 protein.
Length = 448
Score = 52.0 bits (119), Expect = 3e-07
Identities = 45/187 (24%), Positives = 81/187 (43%), Gaps = 18/187 (9%)
Frame = +1
Query: 58 IEXAGIPKXXIKXVYIGNVCSANLGQAPAXQAVIFAGLPKSTICTTVNKVCASGMKSIML 237
+E +P + + G V A +A + AG+P TV C S ++
Sbjct: 60 VEKTKLPYEQLDHIICGTVIQECKTSNIAREAALLAGVPDKIPAHTVTLACISSNVAMTT 119
Query: 238 AAQGLQTGAQDIILAGGMESMSNVPF-YLKRGETSYGGM--------------QLVDGIV 372
L TG + I+AGG+E +S+VP Y + + GM Q+V ++
Sbjct: 120 GMGMLATGNANAIIAGGVELLSDVPIRYNRNARKAMLGMNKAKDVPSKLKIGGQIVKNLL 179
Query: 373 ---FDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAVNSYKRSAAAYEAKAFVDELVP 543
+ + MG+ + A ++R++QDE+A+ S+ ++ A + F D +VP
Sbjct: 180 SPELPAVAEFSTGETMGHSGDRLAAAFNVSRREQDEFAIRSHTLASEAAKNGKFTD-VVP 238
Query: 544 VPVPQKR 564
V + K+
Sbjct: 239 VFLDGKK 245
>D86473-1|BAA20377.1| 412|Caenorhabditis elegans 3-keto-acyl-CoA
thiolase protein.
Length = 412
Score = 35.9 bits (79), Expect = 0.022
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +1
Query: 196 VNKVCASGMKSIMLAAQGLQTGAQDIILAGGMESMS 303
VN CASG + L Q +++G D++L G E M+
Sbjct: 83 VNNACASGSSGLFLGKQIIESGNSDVVLCAGFERMA 118
>AL023847-7|CAA19548.1| 412|Caenorhabditis elegans Hypothetical
protein Y57A10C.6 protein.
Length = 412
Score = 35.9 bits (79), Expect = 0.022
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +1
Query: 196 VNKVCASGMKSIMLAAQGLQTGAQDIILAGGMESMS 303
VN CASG + L Q +++G D++L G E M+
Sbjct: 83 VNNACASGSSGLFLGKQIIESGNSDVVLCAGFERMA 118
>AF098499-2|AAC67396.1| 155|Caenorhabditis elegans Hypothetical
protein C43H8.1 protein.
Length = 155
Score = 29.5 bits (63), Expect = 1.9
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +1
Query: 358 VDGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAV 480
+DG++F L + N FH C AK+++I R D+ ++ +
Sbjct: 72 LDGLLFQFLDEALNSFHAEPCF--VAKRVEILRFDKKKFEI 110
>AF000261-10|AAB52930.1| 639|Caenorhabditis elegans Hypothetical
protein F19B10.10 protein.
Length = 639
Score = 29.1 bits (62), Expect = 2.5
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +3
Query: 150 SCNICRFAKKYHMYNCKQSMCLWHEI 227
+C++ R A KY+ Y +QS LW I
Sbjct: 15 ACSLRRMANKYYPYTMRQSFPLWTSI 40
>Z81545-10|CAB04448.1| 170|Caenorhabditis elegans Hypothetical
protein F49H6.13 protein.
Length = 170
Score = 27.9 bits (59), Expect = 5.8
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = -2
Query: 458 CLVICNFFAVFS 423
C ++CNFFAVFS
Sbjct: 15 CAIVCNFFAVFS 26
>U56965-9|AAB52662.2| 265|Caenorhabditis elegans Hypothetical
protein C15H9.2 protein.
Length = 265
Score = 27.9 bits (59), Expect = 5.8
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 8/62 (12%)
Frame = +3
Query: 114 LFCKFG-PSTCKXSC-NICRFAKKYHMYNCKQ--SMCLWH----EIYNVGSTRSTNWSPR 269
L C +G PS + + NI + H ++CK C ++ YN+ ST+ W+ R
Sbjct: 182 LNCIYGYPSVFRITRGNIVELLELSHFFDCKNVTMFCEYNLCNDTCYNIRSTQKMEWAIR 241
Query: 270 YN 275
YN
Sbjct: 242 YN 243
>AL031627-25|CAA20971.1| 170|Caenorhabditis elegans Hypothetical
protein F49H6.13 protein.
Length = 170
Score = 27.9 bits (59), Expect = 5.8
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = -2
Query: 458 CLVICNFFAVFS 423
C ++CNFFAVFS
Sbjct: 15 CAIVCNFFAVFS 26
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,136,288
Number of Sequences: 27780
Number of extensions: 254933
Number of successful extensions: 700
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 669
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 699
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1258229602
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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