Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_F_M08
(492 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0906 + 22481456-22481802,22482105-22482186,22482299-224824... 31 0.38
10_08_0338 + 16916429-16916650,16916728-16917900 31 0.50
01_01_0241 + 1992553-1993231,1993820-1993918,1994611-1994649,199... 31 0.66
01_01_0066 - 513578-513730,513809-513920,514000-514163,514369-51... 31 0.66
07_03_1061 + 23651404-23651625,23651764-23652954 30 1.2
01_07_0008 + 40389744-40389896,40389967-40390048,40390693-403908... 29 1.5
11_06_0497 + 24337772-24337993,24338042-24338083,24338176-24339357 29 2.0
07_03_0341 - 16956199-16956687 29 2.0
07_01_0413 - 3155080-3155274,3155628-3155933,3156062-3156163,315... 29 2.0
12_02_0849 - 23640091-23640279,23640537-23640677,23640756-236422... 29 2.7
08_01_0153 - 1200121-1200465,1201693-1202920,1204517-1204602,120... 29 2.7
06_03_1468 - 30354724-30354945,30359326-30359497,30359587-303597... 29 2.7
05_04_0283 - 19809137-19809826 29 2.7
08_02_1301 - 25977012-25978037 28 3.5
02_02_0100 - 6783821-6784339,6784815-6784984,6785062-6785164,678... 28 3.5
07_01_0628 - 4691991-4692806,4694291-4694293,4694527-4694637 28 4.7
09_02_0504 - 10013784-10014041,10014558-10014660,10014932-100150... 27 6.2
12_02_0641 + 21450262-21450603,21450691-21450963,21451600-214518... 27 8.2
12_02_0638 + 21439600-21439941,21440029-21440301,21440938-214412... 27 8.2
11_02_0063 + 7916048-7917135,7917225-7918690,7920177-7920238,792... 27 8.2
11_02_0062 - 7909343-7909413,7909509-7910974,7911064-7912088,791... 27 8.2
04_01_0627 - 8242498-8242509,8242652-8242714,8243539-8243667,824... 27 8.2
02_05_0796 + 31800256-31800528,31800635-31800758,31802642-318027... 27 8.2
>07_03_0906 +
22481456-22481802,22482105-22482186,22482299-22482400,
22483005-22483315,22483948-22484044,22484522-22484696,
22485074-22485150,22485632-22486027,22486254-22486303,
22487315-22487382,22488142-22488701
Length = 754
Score = 31.5 bits (68), Expect = 0.38
Identities = 23/72 (31%), Positives = 30/72 (41%)
Frame = +2
Query: 59 PSPTAYRSIVVVVPTGSHRVPAPSPMETQNQDVARSPAEVPNDPGKMFVGGLSWQTSPGK 238
P P A VVVP S P P++ + + SP E K+ G L + PG
Sbjct: 409 PPPEANNK--VVVPDSSPNAAVPRPIKVNTESKSSSPVEQAT-ACKIDKGALPQKEGPGT 465
Query: 239 SSKDISEEQRKA 274
SS +RKA
Sbjct: 466 SSSSPLPVKRKA 477
>10_08_0338 + 16916429-16916650,16916728-16917900
Length = 464
Score = 31.1 bits (67), Expect = 0.50
Identities = 10/19 (52%), Positives = 16/19 (84%)
Frame = +2
Query: 182 NDPGKMFVGGLSWQTSPGK 238
+D GK+F+GG+SW+T+ K
Sbjct: 3 SDQGKLFIGGISWETTEEK 21
>01_01_0241 +
1992553-1993231,1993820-1993918,1994611-1994649,
1994806-1995857
Length = 622
Score = 30.7 bits (66), Expect = 0.66
Identities = 12/35 (34%), Positives = 23/35 (65%)
Frame = +2
Query: 197 MFVGGLSWQTSPGKSSKDISEEQRKAARSLCGHVT 301
+F+ L+W++ ++S D + E+ AA ++CG VT
Sbjct: 9 LFITYLAWESQAFRTSADANPEEGCAASTVCGKVT 43
>01_01_0066 - 513578-513730,513809-513920,514000-514163,514369-514521,
514598-514736,514823-514923,514995-515666,515953-516038,
516112-516777,516874-517128,517231-517358,518645-518799,
518880-519133,519186-519260,519324-519399,519511-519644,
519871-520153,520692-520850,520940-521038,521142-521310,
521423-521653,522002-522114,524179-524310,524389-524469,
525641-525763
Length = 1570
Score = 30.7 bits (66), Expect = 0.66
Identities = 19/51 (37%), Positives = 23/51 (45%)
Frame = +2
Query: 29 VGSAAERLREPSPTAYRSIVVVVPTGSHRVPAPSPMETQNQDVARSPAEVP 181
V A R EPS TA V G++ +PA S TQN RS +P
Sbjct: 979 VDRTARRAEEPSNTAVNGRVQGASPGTNEIPAVS---TQNMPTERSAENIP 1026
>07_03_1061 + 23651404-23651625,23651764-23652954
Length = 470
Score = 29.9 bits (64), Expect = 1.2
Identities = 10/14 (71%), Positives = 13/14 (92%)
Frame = +2
Query: 185 DPGKMFVGGLSWQT 226
D GK+FVGG+SW+T
Sbjct: 4 DSGKLFVGGISWET 17
>01_07_0008 +
40389744-40389896,40389967-40390048,40390693-40390808,
40391107-40391195,40391859-40391904,40392248-40392716,
40392825-40392952,40393182-40393253,40393512-40393885,
40394005-40394545,40394653-40394952,40395167-40395268
Length = 823
Score = 29.5 bits (63), Expect = 1.5
Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 7/88 (7%)
Frame = +2
Query: 71 AYRSIVVV----VPTGSHRVPAPSPMETQNQDVARSPAEVPNDPG---KMFVGGLSWQTS 229
AY IV V V GS V A + T NQ+ + S AE + PG ++F L+ S
Sbjct: 148 AYDHIVFVHYRDVQEGSISVSALNDSSTSNQNGSGSRAEAQSSPGLTSELFAPCLN-SCS 206
Query: 230 PGKSSKDISEEQRKAARSLCGHVTEPLW 313
PG S++++S Q A + V++P W
Sbjct: 207 PG-SAEEVS-SQIMAINNETNSVSQPDW 232
>11_06_0497 + 24337772-24337993,24338042-24338083,24338176-24339357
Length = 481
Score = 29.1 bits (62), Expect = 2.0
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +2
Query: 185 DPGKMFVGGLSWQTS 229
D GK+F+GG+SW T+
Sbjct: 4 DAGKLFIGGISWDTN 18
>07_03_0341 - 16956199-16956687
Length = 162
Score = 29.1 bits (62), Expect = 2.0
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +2
Query: 59 PSPTAYRSIVVVVPTGSHRVPAPSPMETQNQDVARSPAEV 178
P P + I+ P HRVP+P+P++ + R EV
Sbjct: 5 PPPPSSHQIMSASPV-PHRVPSPAPIDDEEDKAKRKKTEV 43
>07_01_0413 -
3155080-3155274,3155628-3155933,3156062-3156163,
3156262-3156705
Length = 348
Score = 29.1 bits (62), Expect = 2.0
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +2
Query: 161 RSPAEVPNDPGKMFVGGLSWQTSPGKSSKDISEEQR 268
RS + +PG++FVG L + + G+ S+ SE R
Sbjct: 108 RSRPALGQEPGRLFVGNLPYTMTSGEISQTFSEAGR 143
>12_02_0849 - 23640091-23640279,23640537-23640677,23640756-23642203,
23642300-23642372,23642452-23642572,23642689-23642791,
23642979-23643052,23643140-23643285,23643368-23643476,
23643580-23643704,23643989-23644342,23644440-23644503,
23644581-23645032
Length = 1132
Score = 28.7 bits (61), Expect = 2.7
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +2
Query: 5 RPMSLVPVVGSAAERLREPSPTAYRSIVVVVPTGSHRVPAPSP 133
+PM++ PVV + + EP PT ++ VPT V P P
Sbjct: 903 KPMAIEPVVPTRKPIVIEPVPTRKPIVIEPVPTRKPIVTEPLP 945
>08_01_0153 -
1200121-1200465,1201693-1202920,1204517-1204602,
1205145-1205272,1205957-1205969
Length = 599
Score = 28.7 bits (61), Expect = 2.7
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +2
Query: 11 MSLVPVVGSAAERLREPSPTAYRSIVVVVPTGSHRVPAPSPMETQ 145
+ LV V SA + EP A + ++ +V T RVP P+P E +
Sbjct: 216 LELVDYVTSATGKFPEP---AVQEVIKMVSTNLFRVPNPAPRENK 257
>06_03_1468 -
30354724-30354945,30359326-30359497,30359587-30359770,
30359865-30360111,30360817-30362052
Length = 686
Score = 28.7 bits (61), Expect = 2.7
Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +2
Query: 56 EPSPTAYRSIVVVVPT--GSHRVPAPSPMETQNQDVARSPAEVPN 184
+P P A ++ PT VPAP P TQ+ V +P+ N
Sbjct: 33 KPLPAALLALAAAAPTLPALADVPAPPPSPTQDVQVLEAPSPAAN 77
>05_04_0283 - 19809137-19809826
Length = 229
Score = 28.7 bits (61), Expect = 2.7
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -1
Query: 189 GSLGTSAGLRATSWFWVSMGLGAGTRCEPVGTTTTIERYAVGDG 58
GS + +GL AT W ++ + A +C + ER AVG G
Sbjct: 83 GSALSISGLGATPWASLAPYVDAAAKCRRFADVVSQERVAVGGG 126
>08_02_1301 - 25977012-25978037
Length = 341
Score = 28.3 bits (60), Expect = 3.5
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -1
Query: 123 AGTRCEPVGTTTTIERYAVGDGSRS 49
A + E GTTTT +AVGDG +S
Sbjct: 8 AELKLEYPGTTTTTNSFAVGDGEQS 32
>02_02_0100 -
6783821-6784339,6784815-6784984,6785062-6785164,
6785291-6785454,6786781-6786821,6786933-6787129
Length = 397
Score = 28.3 bits (60), Expect = 3.5
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +2
Query: 152 DVARSPAEVPNDPGKMFVGGLSWQTSPGKSSK 247
D R+P + GK+FVGG++W+T+ SK
Sbjct: 55 DDGRAPGG--DSSGKIFVGGVAWETTEESFSK 84
>07_01_0628 - 4691991-4692806,4694291-4694293,4694527-4694637
Length = 309
Score = 27.9 bits (59), Expect = 4.7
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +2
Query: 191 GKMFVGGLSWQTSPGKSSKDISE 259
G++FVGGLSW T+ + SE
Sbjct: 7 GRIFVGGLSWDTTERTLERAFSE 29
>09_02_0504 -
10013784-10014041,10014558-10014660,10014932-10015093,
10015416-10015549,10015633-10015716,10015839-10016129,
10016362-10016694,10016823-10016965,10017273-10017429,
10017513-10017616,10017728-10017888,10017971-10018287,
10018396-10018677,10018759-10019226,10019338-10019391,
10019689-10019742,10019943-10020021,10020108-10020196,
10021153-10021273,10022321-10022637
Length = 1236
Score = 27.5 bits (58), Expect = 6.2
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = -1
Query: 183 LGTSAGLRATSWFWVSMG 130
LG+S+ L T W+W+S+G
Sbjct: 696 LGSSSFLPETKWYWISIG 713
>12_02_0641 +
21450262-21450603,21450691-21450963,21451600-21451869,
21452071-21452368,21452455-21452921
Length = 549
Score = 27.1 bits (57), Expect = 8.2
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = -3
Query: 349 LALVNFVRETSTPQRLSHVAAKRPRCFPLLLRDVFRRFTWTSLPAESSDE 200
+AL NF+R+ P R H + P P + FRR+ + +++S E
Sbjct: 481 MALHNFIRDHDAPDRHFHRFERNPDYVP-TIPSRFRRYVLSQDASDTSTE 529
>12_02_0638 +
21439600-21439941,21440029-21440301,21440938-21441207,
21441409-21441706,21441793-21442259
Length = 549
Score = 27.1 bits (57), Expect = 8.2
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = -3
Query: 349 LALVNFVRETSTPQRLSHVAAKRPRCFPLLLRDVFRRFTWTSLPAESSDE 200
+AL NF+R+ P R H + P P + FRR+ + +++S E
Sbjct: 481 MALHNFIRDHDAPDRHFHRFERNPDYVP-TIPSRFRRYVLSQDASDTSTE 529
>11_02_0063 +
7916048-7917135,7917225-7918690,7920177-7920238,
7921808-7922407
Length = 1071
Score = 27.1 bits (57), Expect = 8.2
Identities = 13/55 (23%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +2
Query: 32 GSAAERLR-EPSPTAYRSIVVVVPTGSHRVPAPSPMETQNQDVARSPAEVPNDPG 193
G+ A ++ + +P+ + +V T +P P ++ V +PA++ DPG
Sbjct: 51 GARASNIQVQHAPSTCEAAPSIVETVGSNIPQPEQEPHNSETVELNPADIVADPG 105
>11_02_0062 -
7909343-7909413,7909509-7910974,7911064-7912088,
7912300-7912809,7913418-7913441,7913617-7913673
Length = 1050
Score = 27.1 bits (57), Expect = 8.2
Identities = 13/55 (23%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +2
Query: 32 GSAAERLR-EPSPTAYRSIVVVVPTGSHRVPAPSPMETQNQDVARSPAEVPNDPG 193
G+ A ++ + +P+ + +V T +P P ++ V +PA++ DPG
Sbjct: 227 GARASNIQVQHAPSTCEAAPSIVETVGSNIPQPEQEPHNSETVELNPADIVADPG 281
>04_01_0627 -
8242498-8242509,8242652-8242714,8243539-8243667,
8243756-8243836,8243965-8244084
Length = 134
Score = 27.1 bits (57), Expect = 8.2
Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = +2
Query: 101 TGSHRVPAPSPMETQNQDVARSPAEVPNDPGKMFVGGLSWQTSP--GKSSKDISEEQRKA 274
+GS PAP+P + R VPN+ G + V L T P G + + + E+ R A
Sbjct: 4 SGSSSPPAPAPSFRNRYWILRHGRSVPNERG-IIVSSLENGTKPEFGLAPQGV-EQARLA 61
Query: 275 ARSL 286
SL
Sbjct: 62 GESL 65
>02_05_0796 +
31800256-31800528,31800635-31800758,31802642-31802771,
31804336-31804414,31804848-31805133,31805273-31805385
Length = 334
Score = 27.1 bits (57), Expect = 8.2
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +2
Query: 194 KMFVGGLSWQTSPGKSSKD 250
K+FVGGL+W+T P K +D
Sbjct: 47 KVFVGGLAWET-PSKGLQD 64
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,432,526
Number of Sequences: 37544
Number of extensions: 249032
Number of successful extensions: 1205
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1166
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1204
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1023611560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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